Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
UPF3BQ9BZI7 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC7.13□□□□□ -1.27
UPF3BQ9BZI7 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC7.13□□□□□ -1.27
UPF3BQ9BZI7 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
UPF3BQ9BZI7 CIR1P2-201ENST00000514821 1342 ntBASIC7.13□□□□□ -1.27
UPF3BQ9BZI7 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
UPF3BQ9BZI7 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
UPF3BQ9BZI7 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC7.13□□□□□ -1.27
UPF3BQ9BZI7 SNORD1C-201ENST00000363315 78 ntBASIC7.13□□□□□ -1.27
UPF3BQ9BZI7 RN7SKP69-201ENST00000365390 305 ntBASIC7.13□□□□□ -1.27
UPF3BQ9BZI7 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC7.13□□□□□ -1.27
UPF3BQ9BZI7 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
UPF3BQ9BZI7 AC004386.1-201ENST00000393214 761 ntBASIC7.13□□□□□ -1.27
UPF3BQ9BZI7 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC7.13□□□□□ -1.27
UPF3BQ9BZI7 RPS7P8-201ENST00000418311 581 ntBASIC7.13□□□□□ -1.27
UPF3BQ9BZI7 RPL35AP31-201ENST00000418340 337 ntBASIC7.13□□□□□ -1.27
UPF3BQ9BZI7 NMD3P2-201ENST00000421815 761 ntBASIC7.13□□□□□ -1.27
UPF3BQ9BZI7 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC7.13□□□□□ -1.27
UPF3BQ9BZI7 AL451063.1-201ENST00000450164 1133 ntBASIC7.13□□□□□ -1.27
UPF3BQ9BZI7 AC002553.3-201ENST00000453002 341 ntBASIC7.13□□□□□ -1.27
UPF3BQ9BZI7 AC009963.3-201ENST00000458090 486 ntBASIC7.13□□□□□ -1.27
UPF3BQ9BZI7 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
UPF3BQ9BZI7 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC7.13□□□□□ -1.27
UPF3BQ9BZI7 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC7.13□□□□□ -1.27
UPF3BQ9BZI7 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
UPF3BQ9BZI7 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC7.13□□□□□ -1.27
UPF3BQ9BZI7 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC7.13□□□□□ -1.27
UPF3BQ9BZI7 AC008521.2-201ENST00000591021 259 ntBASIC7.13□□□□□ -1.27
UPF3BQ9BZI7 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
UPF3BQ9BZI7 AC073333.2-201ENST00000603589 769 ntBASIC7.13□□□□□ -1.27
UPF3BQ9BZI7 PCA3_2.1-201ENST00000612507 409 ntBASIC7.13□□□□□ -1.27
UPF3BQ9BZI7 SNX18P12-201ENST00000624821 759 ntBASIC7.13□□□□□ -1.27
UPF3BQ9BZI7 AL357562.1-201ENST00000624911 609 ntBASIC7.13□□□□□ -1.27
UPF3BQ9BZI7 AC073488.6-201ENST00000632293 754 ntBASIC7.13□□□□□ -1.27
UPF3BQ9BZI7 AL391117.1-201ENST00000640003 1186 ntTSL 5 BASIC7.13□□□□□ -1.27
UPF3BQ9BZI7 AC092070.2-203ENST00000598377 3644 ntBASIC7.13□□□□□ -1.27
UPF3BQ9BZI7 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC7.13□□□□□ -1.27
UPF3BQ9BZI7 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC7.13□□□□□ -1.27
UPF3BQ9BZI7 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC7.13□□□□□ -1.27
UPF3BQ9BZI7 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
UPF3BQ9BZI7 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
UPF3BQ9BZI7 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
UPF3BQ9BZI7 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
UPF3BQ9BZI7 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC7.13□□□□□ -1.27
UPF3BQ9BZI7 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
UPF3BQ9BZI7 AL031123.3-201ENST00000623345 1837 ntBASIC7.13□□□□□ -1.27
UPF3BQ9BZI7 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC7.13□□□□□ -1.27
UPF3BQ9BZI7 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
UPF3BQ9BZI7 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
UPF3BQ9BZI7 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC7.12□□□□□ -1.27
UPF3BQ9BZI7 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
UPF3BQ9BZI7 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC7.12□□□□□ -1.27
UPF3BQ9BZI7 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
UPF3BQ9BZI7 RARSP1-201ENST00000542842 1418 ntBASIC7.12□□□□□ -1.27
UPF3BQ9BZI7 AC011933.2-201ENST00000578539 2790 ntBASIC7.12□□□□□ -1.27
UPF3BQ9BZI7 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC7.12□□□□□ -1.27
UPF3BQ9BZI7 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
UPF3BQ9BZI7 AC018765.1-201ENST00000623357 3446 ntBASIC7.12□□□□□ -1.27
UPF3BQ9BZI7 AC027575.3-201ENST00000583058 2747 ntBASIC7.12□□□□□ -1.27
UPF3BQ9BZI7 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC7.12□□□□□ -1.27
UPF3BQ9BZI7 CRP-204ENST00000368112 787 ntTSL 2 BASIC7.12□□□□□ -1.27
UPF3BQ9BZI7 GCNT1P4-201ENST00000404096 329 ntBASIC7.12□□□□□ -1.27
UPF3BQ9BZI7 AC245096.1-201ENST00000413104 546 ntBASIC7.12□□□□□ -1.27
UPF3BQ9BZI7 MRPS21P3-201ENST00000436696 262 ntBASIC7.12□□□□□ -1.27
UPF3BQ9BZI7 SEPT14P12-201ENST00000442280 560 ntBASIC7.12□□□□□ -1.27
UPF3BQ9BZI7 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC7.12□□□□□ -1.27
UPF3BQ9BZI7 AC004870.2-201ENST00000445615 831 ntTSL 3 BASIC7.12□□□□□ -1.27
UPF3BQ9BZI7 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC7.12□□□□□ -1.27
UPF3BQ9BZI7 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
UPF3BQ9BZI7 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC7.12□□□□□ -1.27
UPF3BQ9BZI7 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC7.12□□□□□ -1.27
UPF3BQ9BZI7 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC7.12□□□□□ -1.27
UPF3BQ9BZI7 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC7.12□□□□□ -1.27
UPF3BQ9BZI7 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC7.12□□□□□ -1.27
UPF3BQ9BZI7 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC7.12□□□□□ -1.27
UPF3BQ9BZI7 AL645933.2-201ENST00000606743 1207 ntBASIC7.12□□□□□ -1.27
UPF3BQ9BZI7 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
UPF3BQ9BZI7 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
UPF3BQ9BZI7 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
UPF3BQ9BZI7 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
UPF3BQ9BZI7 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
UPF3BQ9BZI7 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC7.11□□□□□ -1.27
UPF3BQ9BZI7 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC7.11□□□□□ -1.27
UPF3BQ9BZI7 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC7.11□□□□□ -1.27
UPF3BQ9BZI7 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
UPF3BQ9BZI7 RNU1-134P-201ENST00000362935 165 ntBASIC7.11□□□□□ -1.27
UPF3BQ9BZI7 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC7.11□□□□□ -1.27
UPF3BQ9BZI7 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC7.11□□□□□ -1.27
UPF3BQ9BZI7 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
UPF3BQ9BZI7 HMGN1P20-201ENST00000411849 300 ntBASIC7.11□□□□□ -1.27
UPF3BQ9BZI7 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC7.11□□□□□ -1.27
UPF3BQ9BZI7 IPPKP1-201ENST00000422501 768 ntBASIC7.11□□□□□ -1.27
UPF3BQ9BZI7 AC092865.3-201ENST00000425390 1026 ntBASIC7.11□□□□□ -1.27
UPF3BQ9BZI7 FTLP8-201ENST00000446770 267 ntBASIC7.11□□□□□ -1.27
UPF3BQ9BZI7 snoU13.29-201ENST00000459370 104 ntBASIC7.11□□□□□ -1.27
UPF3BQ9BZI7 OR7E99P-201ENST00000505750 922 ntBASIC7.11□□□□□ -1.27
UPF3BQ9BZI7 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC7.11□□□□□ -1.27
UPF3BQ9BZI7 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC7.11□□□□□ -1.27
UPF3BQ9BZI7 OR7E158P-201ENST00000524483 910 ntBASIC7.11□□□□□ -1.27
UPF3BQ9BZI7 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC7.11□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 110.1 ms