Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC5.43□□□□□ -1.54
RSPO3Q9BXY4 NPIPB14P-203ENST00000532298 987 ntBASIC5.43□□□□□ -1.54
RSPO3Q9BXY4 TOMM20P1-201ENST00000534518 427 ntBASIC5.43□□□□□ -1.54
RSPO3Q9BXY4 OLR1-209ENST00000543993 822 ntTSL 2 BASIC5.43□□□□□ -1.54
RSPO3Q9BXY4 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC5.43□□□□□ -1.54
RSPO3Q9BXY4 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC5.43□□□□□ -1.54
RSPO3Q9BXY4 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC5.43□□□□□ -1.54
RSPO3Q9BXY4 AC091078.2-201ENST00000557145 559 ntBASIC5.43□□□□□ -1.54
RSPO3Q9BXY4 AC026826.3-201ENST00000561747 158 ntBASIC5.43□□□□□ -1.54
RSPO3Q9BXY4 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
RSPO3Q9BXY4 TXNP4-201ENST00000575018 310 ntBASIC5.43□□□□□ -1.54
RSPO3Q9BXY4 AC060780.2-201ENST00000589047 198 ntBASIC5.43□□□□□ -1.54
RSPO3Q9BXY4 BX323046.1-201ENST00000610145 535 ntBASIC5.43□□□□□ -1.54
RSPO3Q9BXY4 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC5.43□□□□□ -1.54
RSPO3Q9BXY4 MIR6861-201ENST00000618657 64 ntBASIC5.43□□□□□ -1.54
RSPO3Q9BXY4 AL109924.4-201ENST00000623089 670 ntBASIC5.43□□□□□ -1.54
RSPO3Q9BXY4 AC069542.2-201ENST00000624816 216 ntBASIC5.43□□□□□ -1.54
RSPO3Q9BXY4 AL357140.4-201ENST00000636827 412 ntBASIC5.43□□□□□ -1.54
RSPO3Q9BXY4 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC5.43□□□□□ -1.54
RSPO3Q9BXY4 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
RSPO3Q9BXY4 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC5.43□□□□□ -1.54
RSPO3Q9BXY4 NSF-206ENST00000575068 2667 ntTSL 2 BASIC5.43□□□□□ -1.54
RSPO3Q9BXY4 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
RSPO3Q9BXY4 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC5.43□□□□□ -1.54
RSPO3Q9BXY4 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
RSPO3Q9BXY4 MSL3P1-202ENST00000440028 1468 ntBASIC5.43□□□□□ -1.54
RSPO3Q9BXY4 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
RSPO3Q9BXY4 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC5.43□□□□□ -1.54
RSPO3Q9BXY4 SAMMSON-210ENST00000641260 1308 ntBASIC5.43□□□□□ -1.54
RSPO3Q9BXY4 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC5.43□□□□□ -1.54
RSPO3Q9BXY4 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC5.43□□□□□ -1.54
RSPO3Q9BXY4 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
RSPO3Q9BXY4 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC5.42□□□□□ -1.54
RSPO3Q9BXY4 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
RSPO3Q9BXY4 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
RSPO3Q9BXY4 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
RSPO3Q9BXY4 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC5.42□□□□□ -1.54
RSPO3Q9BXY4 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC5.42□□□□□ -1.54
RSPO3Q9BXY4 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
RSPO3Q9BXY4 GNL2P1-201ENST00000451274 2190 ntBASIC5.42□□□□□ -1.54
RSPO3Q9BXY4 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC5.42□□□□□ -1.54
RSPO3Q9BXY4 RBPJP7-201ENST00000442803 1447 ntBASIC5.42□□□□□ -1.54
RSPO3Q9BXY4 RBPJP5-201ENST00000449433 1447 ntBASIC5.42□□□□□ -1.54
RSPO3Q9BXY4 AC004076.2-201ENST00000620532 3323 ntBASIC5.42□□□□□ -1.54
RSPO3Q9BXY4 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
RSPO3Q9BXY4 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
RSPO3Q9BXY4 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
RSPO3Q9BXY4 RNFT1P3-201ENST00000340898 1052 ntBASIC5.42□□□□□ -1.54
RSPO3Q9BXY4 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC5.42□□□□□ -1.54
RSPO3Q9BXY4 TPT1-204ENST00000379060 764 ntTSL 5 BASIC5.42□□□□□ -1.54
RSPO3Q9BXY4 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
RSPO3Q9BXY4 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
RSPO3Q9BXY4 RNA5SP91-201ENST00000390902 119 ntBASIC5.42□□□□□ -1.54
RSPO3Q9BXY4 GCNT1P4-201ENST00000404096 329 ntBASIC5.42□□□□□ -1.54
RSPO3Q9BXY4 SNRPEP6-201ENST00000407465 277 ntBASIC5.42□□□□□ -1.54
RSPO3Q9BXY4 HSD17B7P1-201ENST00000412419 1017 ntBASIC5.42□□□□□ -1.54
RSPO3Q9BXY4 RPS14P4-201ENST00000415880 418 ntBASIC5.42□□□□□ -1.54
RSPO3Q9BXY4 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC5.42□□□□□ -1.54
RSPO3Q9BXY4 PNKDP1-201ENST00000435914 430 ntBASIC5.42□□□□□ -1.54
RSPO3Q9BXY4 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
RSPO3Q9BXY4 AC007278.2-201ENST00000436582 1200 ntTSL 3 BASIC5.42□□□□□ -1.54
RSPO3Q9BXY4 AC096775.1-201ENST00000437724 448 ntBASIC5.42□□□□□ -1.54
RSPO3Q9BXY4 TRIM60P16-201ENST00000444048 694 ntBASIC5.42□□□□□ -1.54
RSPO3Q9BXY4 SEPHS1P4-201ENST00000446112 1176 ntBASIC5.42□□□□□ -1.54
RSPO3Q9BXY4 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC5.42□□□□□ -1.54
RSPO3Q9BXY4 RPL37P23-201ENST00000492641 294 ntBASIC5.42□□□□□ -1.54
RSPO3Q9BXY4 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC5.42□□□□□ -1.54
RSPO3Q9BXY4 AC091874.2-201ENST00000505889 720 ntBASIC5.42□□□□□ -1.54
RSPO3Q9BXY4 AC018797.1-201ENST00000510791 255 ntBASIC5.42□□□□□ -1.54
RSPO3Q9BXY4 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC5.42□□□□□ -1.54
RSPO3Q9BXY4 IGHVIII-76-1-201ENST00000523776 286 ntBASIC5.42□□□□□ -1.54
RSPO3Q9BXY4 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC5.42□□□□□ -1.54
RSPO3Q9BXY4 AC009167.1-201ENST00000568317 579 ntTSL 4 BASIC5.42□□□□□ -1.54
RSPO3Q9BXY4 AC136443.4-201ENST00000568759 579 ntTSL 4 BASIC5.42□□□□□ -1.54
RSPO3Q9BXY4 AC007346.1-201ENST00000569208 867 ntBASIC5.42□□□□□ -1.54
RSPO3Q9BXY4 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC5.42□□□□□ -1.54
RSPO3Q9BXY4 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC5.42□□□□□ -1.54
RSPO3Q9BXY4 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
RSPO3Q9BXY4 AC073389.3-201ENST00000609434 935 ntBASIC5.42□□□□□ -1.54
RSPO3Q9BXY4 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC5.42□□□□□ -1.54
RSPO3Q9BXY4 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
RSPO3Q9BXY4 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC5.42□□□□□ -1.54
RSPO3Q9BXY4 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
RSPO3Q9BXY4 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
RSPO3Q9BXY4 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC5.42□□□□□ -1.54
RSPO3Q9BXY4 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
RSPO3Q9BXY4 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
RSPO3Q9BXY4 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
RSPO3Q9BXY4 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC5.42□□□□□ -1.54
RSPO3Q9BXY4 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC5.42□□□□□ -1.54
RSPO3Q9BXY4 FBXL21-201ENST00000297158 1305 ntBASIC5.42□□□□□ -1.54
RSPO3Q9BXY4 AC006206.1-201ENST00000544842 3387 ntBASIC5.42□□□□□ -1.54
RSPO3Q9BXY4 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
RSPO3Q9BXY4 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
RSPO3Q9BXY4 AC023632.6-201ENST00000624338 2177 ntBASIC5.42□□□□□ -1.54
RSPO3Q9BXY4 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
RSPO3Q9BXY4 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
RSPO3Q9BXY4 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
RSPO3Q9BXY4 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
RSPO3Q9BXY4 ZFP42-201ENST00000326866 2651 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 74.7 ms