Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC7.28□□□□□ -1.24
RPAP1Q9BWH6 GNL2P1-201ENST00000451274 2190 ntBASIC7.28□□□□□ -1.24
RPAP1Q9BWH6 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
RPAP1Q9BWH6 POGZ-204ENST00000392723 6152 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
RPAP1Q9BWH6 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC7.28□□□□□ -1.24
RPAP1Q9BWH6 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC7.28□□□□□ -1.24
RPAP1Q9BWH6 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC7.28□□□□□ -1.24
RPAP1Q9BWH6 PAX8-AS1-202ENST00000422956 11799 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
RPAP1Q9BWH6 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC7.28□□□□□ -1.24
RPAP1Q9BWH6 DCN-218ENST00000551354 2924 ntTSL 3 BASIC7.28□□□□□ -1.24
RPAP1Q9BWH6 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
RPAP1Q9BWH6 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
RPAP1Q9BWH6 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC7.27□□□□□ -1.24
RPAP1Q9BWH6 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC7.27□□□□□ -1.24
RPAP1Q9BWH6 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
RPAP1Q9BWH6 CSMD2-206ENST00000373388 13118 ntAPPRIS P3 TSL 1 (best) BASIC7.27□□□□□ -1.25
RPAP1Q9BWH6 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
RPAP1Q9BWH6 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
RPAP1Q9BWH6 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC7.27□□□□□ -1.25
RPAP1Q9BWH6 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC7.27□□□□□ -1.25
RPAP1Q9BWH6 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
RPAP1Q9BWH6 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC7.27□□□□□ -1.25
RPAP1Q9BWH6 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC7.27□□□□□ -1.25
RPAP1Q9BWH6 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC7.27□□□□□ -1.25
RPAP1Q9BWH6 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC7.27□□□□□ -1.25
RPAP1Q9BWH6 RPL35AP3-201ENST00000414680 288 ntBASIC7.27□□□□□ -1.25
RPAP1Q9BWH6 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC7.27□□□□□ -1.25
RPAP1Q9BWH6 LINC01762-201ENST00000423907 454 ntTSL 5 BASIC7.27□□□□□ -1.25
RPAP1Q9BWH6 AP000281.1-201ENST00000444036 316 ntBASIC7.27□□□□□ -1.25
RPAP1Q9BWH6 HCG14-201ENST00000444986 413 ntTSL 2 BASIC7.27□□□□□ -1.25
RPAP1Q9BWH6 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC7.27□□□□□ -1.25
RPAP1Q9BWH6 GAS5-218ENST00000448718 565 ntTSL 2 BASIC7.27□□□□□ -1.25
RPAP1Q9BWH6 HNRNPDLP2-201ENST00000455248 751 ntBASIC7.27□□□□□ -1.25
RPAP1Q9BWH6 RPS26P39-201ENST00000469206 341 ntBASIC7.27□□□□□ -1.25
RPAP1Q9BWH6 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC7.27□□□□□ -1.25
RPAP1Q9BWH6 AL122020.1-201ENST00000472287 459 ntBASIC7.27□□□□□ -1.25
RPAP1Q9BWH6 AC124945.1-201ENST00000485133 188 ntBASIC7.27□□□□□ -1.25
RPAP1Q9BWH6 AC027308.1-201ENST00000517993 110 ntBASIC7.27□□□□□ -1.25
RPAP1Q9BWH6 AC135626.1-201ENST00000556983 435 ntBASIC7.27□□□□□ -1.25
RPAP1Q9BWH6 AC103968.1-201ENST00000557841 573 ntBASIC7.27□□□□□ -1.25
RPAP1Q9BWH6 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC7.27□□□□□ -1.25
RPAP1Q9BWH6 AC010547.6-201ENST00000571789 193 ntBASIC7.27□□□□□ -1.25
RPAP1Q9BWH6 OCLM-201ENST00000574641 884 ntAPPRIS P1 BASIC7.27□□□□□ -1.25
RPAP1Q9BWH6 AC022467.1-201ENST00000614738 749 ntBASIC7.27□□□□□ -1.25
RPAP1Q9BWH6 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
RPAP1Q9BWH6 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
RPAP1Q9BWH6 RARSP1-201ENST00000542842 1418 ntBASIC7.27□□□□□ -1.25
RPAP1Q9BWH6 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC7.27□□□□□ -1.25
RPAP1Q9BWH6 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC7.27□□□□□ -1.25
RPAP1Q9BWH6 AC027088.4-201ENST00000611559 1947 ntBASIC7.27□□□□□ -1.25
RPAP1Q9BWH6 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
RPAP1Q9BWH6 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC7.26□□□□□ -1.25
RPAP1Q9BWH6 ZRANB3-210ENST00000536680 6943 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
RPAP1Q9BWH6 AC016583.1-201ENST00000624221 2431 ntBASIC7.26□□□□□ -1.25
RPAP1Q9BWH6 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
RPAP1Q9BWH6 NCOA6-202ENST00000374796 9311 ntAPPRIS P3 TSL 1 (best) BASIC7.26□□□□□ -1.25
RPAP1Q9BWH6 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC7.26□□□□□ -1.25
RPAP1Q9BWH6 MAPK10-270ENST00000641102 3538 ntBASIC7.26□□□□□ -1.25
RPAP1Q9BWH6 RNA5SP500-201ENST00000364486 119 ntBASIC7.26□□□□□ -1.25
RPAP1Q9BWH6 GNG5P2-201ENST00000372054 207 ntBASIC7.26□□□□□ -1.25
RPAP1Q9BWH6 RN7SKP166-201ENST00000410812 305 ntBASIC7.26□□□□□ -1.25
RPAP1Q9BWH6 RN7SKP293-201ENST00000411389 296 ntBASIC7.26□□□□□ -1.25
RPAP1Q9BWH6 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC7.26□□□□□ -1.25
RPAP1Q9BWH6 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC7.26□□□□□ -1.25
RPAP1Q9BWH6 AL731534.1-201ENST00000434711 269 ntBASIC7.26□□□□□ -1.25
RPAP1Q9BWH6 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC7.26□□□□□ -1.25
RPAP1Q9BWH6 AC016027.4-201ENST00000450866 277 ntBASIC7.26□□□□□ -1.25
RPAP1Q9BWH6 RAB28P2-201ENST00000454299 641 ntBASIC7.26□□□□□ -1.25
RPAP1Q9BWH6 RPS27AP2-201ENST00000457576 465 ntBASIC7.26□□□□□ -1.25
RPAP1Q9BWH6 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC7.26□□□□□ -1.25
RPAP1Q9BWH6 AC002456.2-201ENST00000509356 380 ntBASIC7.26□□□□□ -1.25
RPAP1Q9BWH6 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC7.26□□□□□ -1.25
RPAP1Q9BWH6 AL035078.1-201ENST00000531962 820 ntTSL 5 BASIC7.26□□□□□ -1.25
RPAP1Q9BWH6 HNRNPCP1-201ENST00000556181 766 ntBASIC7.26□□□□□ -1.25
RPAP1Q9BWH6 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC7.26□□□□□ -1.25
RPAP1Q9BWH6 AL512624.1-201ENST00000613638 469 ntBASIC7.26□□□□□ -1.25
RPAP1Q9BWH6 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC7.26□□□□□ -1.25
RPAP1Q9BWH6 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC7.26□□□□□ -1.25
RPAP1Q9BWH6 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
RPAP1Q9BWH6 HUWE1-203ENST00000342160 14796 ntAPPRIS P1 TSL 5 BASIC7.26□□□□□ -1.25
RPAP1Q9BWH6 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC7.26□□□□□ -1.25
RPAP1Q9BWH6 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC7.26□□□□□ -1.25
RPAP1Q9BWH6 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC7.26□□□□□ -1.25
RPAP1Q9BWH6 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC7.26□□□□□ -1.25
RPAP1Q9BWH6 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC7.26□□□□□ -1.25
RPAP1Q9BWH6 AL357153.1-201ENST00000500016 2941 ntTSL 2 BASIC7.26□□□□□ -1.25
RPAP1Q9BWH6 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
RPAP1Q9BWH6 AC012254.3-201ENST00000591183 2117 ntBASIC7.25□□□□□ -1.25
RPAP1Q9BWH6 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
RPAP1Q9BWH6 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
RPAP1Q9BWH6 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC7.25□□□□□ -1.25
RPAP1Q9BWH6 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC7.25□□□□□ -1.25
RPAP1Q9BWH6 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC7.25□□□□□ -1.25
RPAP1Q9BWH6 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC7.25□□□□□ -1.25
RPAP1Q9BWH6 AC022164.1-201ENST00000568767 2673 ntBASIC7.25□□□□□ -1.25
RPAP1Q9BWH6 AL161901.1-201ENST00000624954 3425 ntBASIC7.25□□□□□ -1.25
RPAP1Q9BWH6 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
RPAP1Q9BWH6 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC7.25□□□□□ -1.25
RPAP1Q9BWH6 MIR143-201ENST00000385300 106 ntBASIC7.25□□□□□ -1.25
RPAP1Q9BWH6 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC7.25□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 112.9 ms