Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 SNORA77.2-201ENST00000408571 112 ntBASIC5.66□□□□□ -1.5
COL21A1Q96P44 RNU2-18P-201ENST00000411224 162 ntBASIC5.66□□□□□ -1.5
COL21A1Q96P44 PTCD2P2-201ENST00000415579 1095 ntBASIC5.66□□□□□ -1.5
COL21A1Q96P44 TRGV5P-201ENST00000419915 354 ntBASIC5.66□□□□□ -1.5
COL21A1Q96P44 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC5.66□□□□□ -1.5
COL21A1Q96P44 RPL5P2-201ENST00000429598 854 ntBASIC5.66□□□□□ -1.5
COL21A1Q96P44 RPS3AP38-201ENST00000435889 763 ntBASIC5.66□□□□□ -1.5
COL21A1Q96P44 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC5.66□□□□□ -1.5
COL21A1Q96P44 AL162739.1-201ENST00000450606 307 ntBASIC5.66□□□□□ -1.5
COL21A1Q96P44 AC002553.3-201ENST00000453002 341 ntBASIC5.66□□□□□ -1.5
COL21A1Q96P44 Z83838.1-202ENST00000456225 839 ntBASIC5.66□□□□□ -1.5
COL21A1Q96P44 RN7SL741P-201ENST00000482473 289 ntBASIC5.66□□□□□ -1.5
COL21A1Q96P44 KDELR2-206ENST00000490996 655 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
COL21A1Q96P44 RN7SL284P-201ENST00000498823 275 ntBASIC5.66□□□□□ -1.5
COL21A1Q96P44 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC5.66□□□□□ -1.5
COL21A1Q96P44 HSD3BP3-201ENST00000514706 994 ntBASIC5.66□□□□□ -1.5
COL21A1Q96P44 RNA5SP434-201ENST00000516647 121 ntBASIC5.66□□□□□ -1.5
COL21A1Q96P44 AC021269.1-201ENST00000526860 705 ntBASIC5.66□□□□□ -1.5
COL21A1Q96P44 AC084121.1-201ENST00000533882 835 ntBASIC5.66□□□□□ -1.5
COL21A1Q96P44 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC5.66□□□□□ -1.5
COL21A1Q96P44 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC5.66□□□□□ -1.5
COL21A1Q96P44 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
COL21A1Q96P44 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC5.66□□□□□ -1.5
COL21A1Q96P44 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC5.66□□□□□ -1.5
COL21A1Q96P44 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC5.66□□□□□ -1.5
COL21A1Q96P44 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC5.66□□□□□ -1.5
COL21A1Q96P44 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC5.66□□□□□ -1.5
COL21A1Q96P44 AC124916.2-201ENST00000604416 224 ntBASIC5.66□□□□□ -1.5
COL21A1Q96P44 AL136097.3-201ENST00000611097 505 ntBASIC5.66□□□□□ -1.5
COL21A1Q96P44 AL157762.1-201ENST00000619612 415 ntBASIC5.66□□□□□ -1.5
COL21A1Q96P44 FAM27E2-201ENST00000619668 403 ntBASIC5.66□□□□□ -1.5
COL21A1Q96P44 AC016542.2-201ENST00000624201 619 ntBASIC5.66□□□□□ -1.5
COL21A1Q96P44 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC5.66□□□□□ -1.5
COL21A1Q96P44 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
COL21A1Q96P44 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
COL21A1Q96P44 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
COL21A1Q96P44 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
COL21A1Q96P44 TCF12-205ENST00000537840 1598 ntTSL 2 BASIC5.66□□□□□ -1.5
COL21A1Q96P44 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC5.66□□□□□ -1.5
COL21A1Q96P44 AC016583.1-201ENST00000624221 2431 ntBASIC5.66□□□□□ -1.5
COL21A1Q96P44 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
COL21A1Q96P44 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
COL21A1Q96P44 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
COL21A1Q96P44 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
COL21A1Q96P44 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC5.65□□□□□ -1.5
COL21A1Q96P44 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
COL21A1Q96P44 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
COL21A1Q96P44 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
COL21A1Q96P44 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
COL21A1Q96P44 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
COL21A1Q96P44 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
COL21A1Q96P44 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
COL21A1Q96P44 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.65□□□□□ -1.5
COL21A1Q96P44 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC5.65□□□□□ -1.5
COL21A1Q96P44 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
COL21A1Q96P44 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
COL21A1Q96P44 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
COL21A1Q96P44 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.5
COL21A1Q96P44 RNU1-65P-201ENST00000363919 148 ntBASIC5.65□□□□□ -1.5
COL21A1Q96P44 RN7SKP187-201ENST00000365536 330 ntBASIC5.65□□□□□ -1.5
COL21A1Q96P44 CRP-204ENST00000368112 787 ntTSL 2 BASIC5.65□□□□□ -1.5
COL21A1Q96P44 AL132875.1-201ENST00000403623 949 ntBASIC5.65□□□□□ -1.5
COL21A1Q96P44 PLA2G12AP2-201ENST00000424744 264 ntBASIC5.65□□□□□ -1.5
COL21A1Q96P44 AC005008.2-201ENST00000431501 715 ntTSL 3 BASIC5.65□□□□□ -1.5
COL21A1Q96P44 AC073410.1-201ENST00000435125 589 ntBASIC5.65□□□□□ -1.5
COL21A1Q96P44 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC5.65□□□□□ -1.5
COL21A1Q96P44 PPIAP7-201ENST00000454070 489 ntBASIC5.65□□□□□ -1.5
COL21A1Q96P44 AC108751.3-201ENST00000461814 1020 ntBASIC5.65□□□□□ -1.5
COL21A1Q96P44 RN7SL168P-201ENST00000463821 279 ntBASIC5.65□□□□□ -1.5
COL21A1Q96P44 RPL23AP40-201ENST00000487630 390 ntBASIC5.65□□□□□ -1.5
COL21A1Q96P44 ST13P12-201ENST00000508958 1094 ntBASIC5.65□□□□□ -1.5
COL21A1Q96P44 AP000620.1-201ENST00000527147 504 ntBASIC5.65□□□□□ -1.5
COL21A1Q96P44 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC5.65□□□□□ -1.5
COL21A1Q96P44 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC5.65□□□□□ -1.5
COL21A1Q96P44 AL845552.1-201ENST00000556820 323 ntBASIC5.65□□□□□ -1.5
COL21A1Q96P44 AL049779.3-201ENST00000557141 606 ntBASIC5.65□□□□□ -1.5
COL21A1Q96P44 AC007346.1-201ENST00000569208 867 ntBASIC5.65□□□□□ -1.5
COL21A1Q96P44 AC002310.3-201ENST00000569728 723 ntBASIC5.65□□□□□ -1.5
COL21A1Q96P44 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC5.65□□□□□ -1.5
COL21A1Q96P44 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC5.65□□□□□ -1.5
COL21A1Q96P44 AC097641.3-201ENST00000613523 464 ntBASIC5.65□□□□□ -1.5
COL21A1Q96P44 RNA5SP439-201ENST00000617595 124 ntBASIC5.65□□□□□ -1.5
COL21A1Q96P44 AC073592.6-201ENST00000624271 415 ntBASIC5.65□□□□□ -1.5
COL21A1Q96P44 TEX41-271ENST00000628213 993 ntTSL 5 BASIC5.65□□□□□ -1.5
COL21A1Q96P44 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC5.65□□□□□ -1.5
COL21A1Q96P44 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
COL21A1Q96P44 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC5.65□□□□□ -1.51
COL21A1Q96P44 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC5.65□□□□□ -1.51
COL21A1Q96P44 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC5.65□□□□□ -1.51
COL21A1Q96P44 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.65□□□□□ -1.51
COL21A1Q96P44 AL137141.1-201ENST00000624622 4836 ntBASIC5.65□□□□□ -1.51
COL21A1Q96P44 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
COL21A1Q96P44 AC239868.2-201ENST00000564237 4527 ntBASIC5.65□□□□□ -1.51
COL21A1Q96P44 AL161912.4-201ENST00000623889 2468 ntBASIC5.65□□□□□ -1.51
COL21A1Q96P44 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC5.65□□□□□ -1.51
COL21A1Q96P44 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC5.65□□□□□ -1.51
COL21A1Q96P44 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
COL21A1Q96P44 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
COL21A1Q96P44 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
COL21A1Q96P44 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC5.64□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 140.2 ms