Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
PDLIM5Q96HC4 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
PDLIM5Q96HC4 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
PDLIM5Q96HC4 DMD-211ENST00000378707 7410 ntTSL 5 BASIC5.92□□□□□ -1.46
PDLIM5Q96HC4 SPRY3-201ENST00000302805 9019 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
PDLIM5Q96HC4 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC5.92□□□□□ -1.46
PDLIM5Q96HC4 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
PDLIM5Q96HC4 OR56A4-201ENST00000330728 1209 ntBASIC5.92□□□□□ -1.46
PDLIM5Q96HC4 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC5.92□□□□□ -1.46
PDLIM5Q96HC4 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC5.92□□□□□ -1.46
PDLIM5Q96HC4 THEM7P-201ENST00000419556 672 ntBASIC5.92□□□□□ -1.46
PDLIM5Q96HC4 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC5.92□□□□□ -1.46
PDLIM5Q96HC4 PSMD10P2-201ENST00000432890 672 ntBASIC5.92□□□□□ -1.46
PDLIM5Q96HC4 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC5.92□□□□□ -1.46
PDLIM5Q96HC4 ZNF619P1-201ENST00000446539 752 ntBASIC5.92□□□□□ -1.46
PDLIM5Q96HC4 AC016027.4-201ENST00000450866 277 ntBASIC5.92□□□□□ -1.46
PDLIM5Q96HC4 SH2D1A-203ENST00000477673 461 ntTSL 2 BASIC5.92□□□□□ -1.46
PDLIM5Q96HC4 TRBV5-2-201ENST00000489095 273 ntBASIC5.92□□□□□ -1.46
PDLIM5Q96HC4 AP002453.1-201ENST00000492327 668 ntBASIC5.92□□□□□ -1.46
PDLIM5Q96HC4 MORF4L2P1-201ENST00000503761 858 ntBASIC5.92□□□□□ -1.46
PDLIM5Q96HC4 AC108103.1-201ENST00000511286 446 ntBASIC5.92□□□□□ -1.46
PDLIM5Q96HC4 TOMM22P4-201ENST00000511318 336 ntBASIC5.92□□□□□ -1.46
PDLIM5Q96HC4 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC5.92□□□□□ -1.46
PDLIM5Q96HC4 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC5.92□□□□□ -1.46
PDLIM5Q96HC4 AC084880.3-201ENST00000535921 541 ntTSL 4 BASIC5.92□□□□□ -1.46
PDLIM5Q96HC4 AL162511.1-201ENST00000556542 879 ntTSL 4 BASIC5.92□□□□□ -1.46
PDLIM5Q96HC4 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC5.92□□□□□ -1.46
PDLIM5Q96HC4 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC5.92□□□□□ -1.46
PDLIM5Q96HC4 CNEP1R1-204ENST00000562576 656 ntTSL 5 BASIC5.92□□□□□ -1.46
PDLIM5Q96HC4 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
PDLIM5Q96HC4 AL078601.3-201ENST00000573303 535 ntBASIC5.92□□□□□ -1.46
PDLIM5Q96HC4 AC016839.1-201ENST00000578162 867 ntBASIC5.92□□□□□ -1.46
PDLIM5Q96HC4 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC5.92□□□□□ -1.46
PDLIM5Q96HC4 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC5.92□□□□□ -1.46
PDLIM5Q96HC4 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC5.92□□□□□ -1.46
PDLIM5Q96HC4 AC099654.15-201ENST00000639802 509 ntBASIC5.92□□□□□ -1.46
PDLIM5Q96HC4 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
PDLIM5Q96HC4 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
PDLIM5Q96HC4 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC5.92□□□□□ -1.46
PDLIM5Q96HC4 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
PDLIM5Q96HC4 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC5.92□□□□□ -1.46
PDLIM5Q96HC4 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC5.92□□□□□ -1.46
PDLIM5Q96HC4 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
PDLIM5Q96HC4 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
PDLIM5Q96HC4 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
PDLIM5Q96HC4 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
PDLIM5Q96HC4 TAF12-202ENST00000373824 1334 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
PDLIM5Q96HC4 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC5.92□□□□□ -1.46
PDLIM5Q96HC4 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
PDLIM5Q96HC4 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC5.92□□□□□ -1.46
PDLIM5Q96HC4 AC119674.1-202ENST00000641333 1860 ntBASIC5.92□□□□□ -1.46
PDLIM5Q96HC4 MTND5P23-201ENST00000430812 1655 ntBASIC5.91□□□□□ -1.46
PDLIM5Q96HC4 AC245100.2-201ENST00000454544 1679 ntBASIC5.91□□□□□ -1.46
PDLIM5Q96HC4 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
PDLIM5Q96HC4 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC5.91□□□□□ -1.46
PDLIM5Q96HC4 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC5.91□□□□□ -1.46
PDLIM5Q96HC4 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
PDLIM5Q96HC4 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
PDLIM5Q96HC4 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
PDLIM5Q96HC4 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
PDLIM5Q96HC4 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
PDLIM5Q96HC4 AC130304.1-201ENST00000622942 2385 ntBASIC5.91□□□□□ -1.46
PDLIM5Q96HC4 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
PDLIM5Q96HC4 CLC-201ENST00000221804 635 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
PDLIM5Q96HC4 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
PDLIM5Q96HC4 C3orf14-201ENST00000232519 690 ntAPPRIS P1 TSL 3 BASIC5.91□□□□□ -1.46
PDLIM5Q96HC4 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC5.91□□□□□ -1.46
PDLIM5Q96HC4 AC084030.1-202ENST00000413385 880 ntTSL 5 BASIC5.91□□□□□ -1.46
PDLIM5Q96HC4 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC5.91□□□□□ -1.46
PDLIM5Q96HC4 AL355581.1-201ENST00000415964 830 ntTSL 2 BASIC5.91□□□□□ -1.46
PDLIM5Q96HC4 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC5.91□□□□□ -1.46
PDLIM5Q96HC4 RPSAP65-201ENST00000429660 595 ntBASIC5.91□□□□□ -1.46
PDLIM5Q96HC4 RPL12P16-201ENST00000431098 498 ntBASIC5.91□□□□□ -1.46
PDLIM5Q96HC4 USP24P1-201ENST00000433802 779 ntBASIC5.91□□□□□ -1.46
PDLIM5Q96HC4 AC073410.1-201ENST00000435125 589 ntBASIC5.91□□□□□ -1.46
PDLIM5Q96HC4 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC5.91□□□□□ -1.46
PDLIM5Q96HC4 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC5.91□□□□□ -1.46
PDLIM5Q96HC4 MTCYBP14-201ENST00000457471 715 ntBASIC5.91□□□□□ -1.46
PDLIM5Q96HC4 ACA64.4-201ENST00000459070 127 ntBASIC5.91□□□□□ -1.46
PDLIM5Q96HC4 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC5.91□□□□□ -1.46
PDLIM5Q96HC4 AC098818.1-201ENST00000478593 252 ntBASIC5.91□□□□□ -1.46
PDLIM5Q96HC4 AC083795.1-201ENST00000491760 320 ntBASIC5.91□□□□□ -1.46
PDLIM5Q96HC4 RN7SL568P-201ENST00000493069 298 ntBASIC5.91□□□□□ -1.46
PDLIM5Q96HC4 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC5.91□□□□□ -1.46
PDLIM5Q96HC4 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC5.91□□□□□ -1.46
PDLIM5Q96HC4 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC5.91□□□□□ -1.46
PDLIM5Q96HC4 AC008957.1-203ENST00000508745 589 ntTSL 3 BASIC5.91□□□□□ -1.46
PDLIM5Q96HC4 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC5.91□□□□□ -1.46
PDLIM5Q96HC4 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC5.91□□□□□ -1.46
PDLIM5Q96HC4 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC5.91□□□□□ -1.46
PDLIM5Q96HC4 HMGN1P17-201ENST00000513734 295 ntBASIC5.91□□□□□ -1.46
PDLIM5Q96HC4 snoU109.5-201ENST00000516231 132 ntBASIC5.91□□□□□ -1.46
PDLIM5Q96HC4 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC5.91□□□□□ -1.46
PDLIM5Q96HC4 IGKV1OR22-1-201ENST00000521497 360 ntBASIC5.91□□□□□ -1.46
PDLIM5Q96HC4 AC110056.1-201ENST00000525759 911 ntBASIC5.91□□□□□ -1.46
PDLIM5Q96HC4 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
PDLIM5Q96HC4 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC5.91□□□□□ -1.46
PDLIM5Q96HC4 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC5.91□□□□□ -1.46
PDLIM5Q96HC4 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC5.91□□□□□ -1.46
PDLIM5Q96HC4 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC5.91□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 68.6 ms