Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
RTN4IP1Q8WWV3 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
RTN4IP1Q8WWV3 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
RTN4IP1Q8WWV3 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
RTN4IP1Q8WWV3 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
RTN4IP1Q8WWV3 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
RTN4IP1Q8WWV3 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
RTN4IP1Q8WWV3 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
RTN4IP1Q8WWV3 AC005005.4-201ENST00000623789 16698 ntBASIC4.99□□□□□ -1.61
RTN4IP1Q8WWV3 AC114774.1-201ENST00000507410 1770 ntBASIC4.99□□□□□ -1.61
RTN4IP1Q8WWV3 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
RTN4IP1Q8WWV3 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
RTN4IP1Q8WWV3 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
RTN4IP1Q8WWV3 CDY3P-201ENST00000454543 1618 ntBASIC4.99□□□□□ -1.61
RTN4IP1Q8WWV3 RN7SKP250-201ENST00000363924 321 ntBASIC4.99□□□□□ -1.61
RTN4IP1Q8WWV3 RPS7P8-201ENST00000418311 581 ntBASIC4.99□□□□□ -1.61
RTN4IP1Q8WWV3 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC4.99□□□□□ -1.61
RTN4IP1Q8WWV3 SEPHS1P4-201ENST00000446112 1176 ntBASIC4.99□□□□□ -1.61
RTN4IP1Q8WWV3 AC098818.1-201ENST00000478593 252 ntBASIC4.99□□□□□ -1.61
RTN4IP1Q8WWV3 RABGAP1L-216ENST00000486220 772 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
RTN4IP1Q8WWV3 RPL12P30-201ENST00000488389 499 ntBASIC4.99□□□□□ -1.61
RTN4IP1Q8WWV3 RN7SL568P-201ENST00000493069 298 ntBASIC4.99□□□□□ -1.61
RTN4IP1Q8WWV3 AC113367.2-201ENST00000505749 160 ntBASIC4.99□□□□□ -1.61
RTN4IP1Q8WWV3 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC4.99□□□□□ -1.61
RTN4IP1Q8WWV3 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC4.99□□□□□ -1.61
RTN4IP1Q8WWV3 AP003033.2-201ENST00000528901 805 ntBASIC4.99□□□□□ -1.61
RTN4IP1Q8WWV3 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC4.99□□□□□ -1.61
RTN4IP1Q8WWV3 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC4.99□□□□□ -1.61
RTN4IP1Q8WWV3 AL162511.1-201ENST00000556542 879 ntTSL 4 BASIC4.99□□□□□ -1.61
RTN4IP1Q8WWV3 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC4.99□□□□□ -1.61
RTN4IP1Q8WWV3 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC4.99□□□□□ -1.61
RTN4IP1Q8WWV3 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC4.99□□□□□ -1.61
RTN4IP1Q8WWV3 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC4.99□□□□□ -1.61
RTN4IP1Q8WWV3 AP005136.2-201ENST00000583253 1049 ntBASIC4.99□□□□□ -1.61
RTN4IP1Q8WWV3 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC4.99□□□□□ -1.61
RTN4IP1Q8WWV3 AL135999.3-201ENST00000610501 812 ntBASIC4.99□□□□□ -1.61
RTN4IP1Q8WWV3 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC4.99□□□□□ -1.61
RTN4IP1Q8WWV3 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC4.99□□□□□ -1.61
RTN4IP1Q8WWV3 5S_rRNA.29-201ENST00000641250 107 ntBASIC4.99□□□□□ -1.61
RTN4IP1Q8WWV3 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
RTN4IP1Q8WWV3 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
RTN4IP1Q8WWV3 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC4.99□□□□□ -1.61
RTN4IP1Q8WWV3 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
RTN4IP1Q8WWV3 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
RTN4IP1Q8WWV3 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
RTN4IP1Q8WWV3 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
RTN4IP1Q8WWV3 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC4.99□□□□□ -1.61
RTN4IP1Q8WWV3 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC4.99□□□□□ -1.61
RTN4IP1Q8WWV3 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
RTN4IP1Q8WWV3 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
RTN4IP1Q8WWV3 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC4.98□□□□□ -1.61
RTN4IP1Q8WWV3 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
RTN4IP1Q8WWV3 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
RTN4IP1Q8WWV3 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
RTN4IP1Q8WWV3 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
RTN4IP1Q8WWV3 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
RTN4IP1Q8WWV3 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
RTN4IP1Q8WWV3 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
RTN4IP1Q8WWV3 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC4.98□□□□□ -1.61
RTN4IP1Q8WWV3 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC4.98□□□□□ -1.61
RTN4IP1Q8WWV3 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
RTN4IP1Q8WWV3 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
RTN4IP1Q8WWV3 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
RTN4IP1Q8WWV3 FCGR1B-202ENST00000369383 570 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
RTN4IP1Q8WWV3 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC4.98□□□□□ -1.61
RTN4IP1Q8WWV3 RNA5SP156-201ENST00000410250 110 ntBASIC4.98□□□□□ -1.61
RTN4IP1Q8WWV3 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC4.98□□□□□ -1.61
RTN4IP1Q8WWV3 THEM7P-201ENST00000419556 672 ntBASIC4.98□□□□□ -1.61
RTN4IP1Q8WWV3 MRPS21P2-201ENST00000424704 264 ntBASIC4.98□□□□□ -1.61
RTN4IP1Q8WWV3 BX276092.6-201ENST00000430476 250 ntBASIC4.98□□□□□ -1.61
RTN4IP1Q8WWV3 PSMD10P2-201ENST00000432890 672 ntBASIC4.98□□□□□ -1.61
RTN4IP1Q8WWV3 AC096632.2-201ENST00000438139 1239 ntBASIC4.98□□□□□ -1.61
RTN4IP1Q8WWV3 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC4.98□□□□□ -1.61
RTN4IP1Q8WWV3 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC4.98□□□□□ -1.61
RTN4IP1Q8WWV3 AL590004.3-202ENST00000445883 451 ntBASIC4.98□□□□□ -1.61
RTN4IP1Q8WWV3 AC073072.2-201ENST00000447425 348 ntBASIC4.98□□□□□ -1.61
RTN4IP1Q8WWV3 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC4.98□□□□□ -1.61
RTN4IP1Q8WWV3 BX276092.8-201ENST00000455722 250 ntBASIC4.98□□□□□ -1.61
RTN4IP1Q8WWV3 AC108751.3-201ENST00000461814 1020 ntBASIC4.98□□□□□ -1.61
RTN4IP1Q8WWV3 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
RTN4IP1Q8WWV3 RN7SL836P-201ENST00000476140 296 ntBASIC4.98□□□□□ -1.61
RTN4IP1Q8WWV3 PDCL3P4-201ENST00000489621 720 ntBASIC4.98□□□□□ -1.61
RTN4IP1Q8WWV3 AP002453.1-201ENST00000492327 668 ntBASIC4.98□□□□□ -1.61
RTN4IP1Q8WWV3 RN7SL362P-201ENST00000494228 267 ntBASIC4.98□□□□□ -1.61
RTN4IP1Q8WWV3 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
RTN4IP1Q8WWV3 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC4.98□□□□□ -1.61
RTN4IP1Q8WWV3 AC108103.1-201ENST00000511286 446 ntBASIC4.98□□□□□ -1.61
RTN4IP1Q8WWV3 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC4.98□□□□□ -1.61
RTN4IP1Q8WWV3 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC4.98□□□□□ -1.61
RTN4IP1Q8WWV3 OR4A41P-201ENST00000533053 928 ntBASIC4.98□□□□□ -1.61
RTN4IP1Q8WWV3 AC036111.2-201ENST00000533247 901 ntBASIC4.98□□□□□ -1.61
RTN4IP1Q8WWV3 AC084880.3-201ENST00000535921 541 ntTSL 4 BASIC4.98□□□□□ -1.61
RTN4IP1Q8WWV3 BMS1P16-201ENST00000556075 1147 ntBASIC4.98□□□□□ -1.61
RTN4IP1Q8WWV3 AC121758.1-202ENST00000556917 658 ntBASIC4.98□□□□□ -1.61
RTN4IP1Q8WWV3 AC084782.2-201ENST00000561934 839 ntTSL 3 BASIC4.98□□□□□ -1.61
RTN4IP1Q8WWV3 AL078601.3-201ENST00000573303 535 ntBASIC4.98□□□□□ -1.61
RTN4IP1Q8WWV3 AC138207.8-204ENST00000579588 527 ntBASIC4.98□□□□□ -1.61
RTN4IP1Q8WWV3 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC4.98□□□□□ -1.61
RTN4IP1Q8WWV3 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC4.98□□□□□ -1.61
RTN4IP1Q8WWV3 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC4.98□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 123.2 ms