Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
LRRC28Q86X40 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
LRRC28Q86X40 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC5.34□□□□□ -1.55
LRRC28Q86X40 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
LRRC28Q86X40 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
LRRC28Q86X40 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
LRRC28Q86X40 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
LRRC28Q86X40 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.34□□□□□ -1.55
LRRC28Q86X40 AC107977.1-201ENST00000355745 939 ntBASIC5.34□□□□□ -1.55
LRRC28Q86X40 RNA5SP232-201ENST00000364144 119 ntBASIC5.34□□□□□ -1.55
LRRC28Q86X40 PEX12P1-201ENST00000400284 1048 ntBASIC5.34□□□□□ -1.55
LRRC28Q86X40 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC5.34□□□□□ -1.55
LRRC28Q86X40 MTND2P12-201ENST00000417560 1252 ntBASIC5.34□□□□□ -1.55
LRRC28Q86X40 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
LRRC28Q86X40 AC211433.1-202ENST00000434256 1187 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
LRRC28Q86X40 GTF2IP14-201ENST00000441415 586 ntBASIC5.34□□□□□ -1.55
LRRC28Q86X40 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC5.34□□□□□ -1.55
LRRC28Q86X40 OR7E22P-201ENST00000478335 1035 ntBASIC5.34□□□□□ -1.55
LRRC28Q86X40 RPL12P31-201ENST00000478433 450 ntBASIC5.34□□□□□ -1.55
LRRC28Q86X40 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC5.34□□□□□ -1.55
LRRC28Q86X40 AC091874.2-201ENST00000505889 720 ntBASIC5.34□□□□□ -1.55
LRRC28Q86X40 LINC01093-201ENST00000506479 634 ntTSL 3 BASIC5.34□□□□□ -1.55
LRRC28Q86X40 APOBEC3AP1-201ENST00000511396 287 ntBASIC5.34□□□□□ -1.55
LRRC28Q86X40 AC111000.6-201ENST00000514471 709 ntBASIC5.34□□□□□ -1.55
LRRC28Q86X40 RNA5SP473-201ENST00000516402 125 ntBASIC5.34□□□□□ -1.55
LRRC28Q86X40 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC5.34□□□□□ -1.55
LRRC28Q86X40 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC5.34□□□□□ -1.55
LRRC28Q86X40 TPM3P3-201ENST00000521343 354 ntBASIC5.34□□□□□ -1.55
LRRC28Q86X40 GTF2IP11-201ENST00000526931 420 ntBASIC5.34□□□□□ -1.55
LRRC28Q86X40 NOX4-213ENST00000531342 696 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
LRRC28Q86X40 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC5.34□□□□□ -1.55
LRRC28Q86X40 DAAM1-208ENST00000556135 582 ntTSL 3 BASIC5.34□□□□□ -1.55
LRRC28Q86X40 AC107958.1-201ENST00000556576 290 ntBASIC5.34□□□□□ -1.55
LRRC28Q86X40 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC5.34□□□□□ -1.55
LRRC28Q86X40 AL078601.3-201ENST00000573303 535 ntBASIC5.34□□□□□ -1.55
LRRC28Q86X40 OR1E3-201ENST00000575608 948 ntBASIC5.34□□□□□ -1.55
LRRC28Q86X40 SEPT4-AS1-202ENST00000580589 653 ntTSL 3 BASIC5.34□□□□□ -1.55
LRRC28Q86X40 RN7SL475P-201ENST00000583379 298 ntBASIC5.34□□□□□ -1.55
LRRC28Q86X40 DYNLL1P1-201ENST00000595442 269 ntBASIC5.34□□□□□ -1.55
LRRC28Q86X40 SMIM12P1-201ENST00000603004 274 ntBASIC5.34□□□□□ -1.55
LRRC28Q86X40 AL022394.1-201ENST00000606979 292 ntBASIC5.34□□□□□ -1.55
LRRC28Q86X40 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC5.34□□□□□ -1.55
LRRC28Q86X40 AL135999.3-201ENST00000610501 812 ntBASIC5.34□□□□□ -1.55
LRRC28Q86X40 uc_338.31-201ENST00000615595 186 ntBASIC5.34□□□□□ -1.55
LRRC28Q86X40 AL683826.1-201ENST00000624104 627 ntBASIC5.34□□□□□ -1.55
LRRC28Q86X40 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC5.34□□□□□ -1.55
LRRC28Q86X40 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
LRRC28Q86X40 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
LRRC28Q86X40 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
LRRC28Q86X40 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.56
LRRC28Q86X40 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
LRRC28Q86X40 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.34□□□□□ -1.56
LRRC28Q86X40 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.34□□□□□ -1.56
LRRC28Q86X40 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.34□□□□□ -1.56
LRRC28Q86X40 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
LRRC28Q86X40 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
LRRC28Q86X40 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC5.34□□□□□ -1.56
LRRC28Q86X40 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
LRRC28Q86X40 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
LRRC28Q86X40 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.34□□□□□ -1.56
LRRC28Q86X40 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
LRRC28Q86X40 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC5.33□□□□□ -1.56
LRRC28Q86X40 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC5.33□□□□□ -1.56
LRRC28Q86X40 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC5.33□□□□□ -1.56
LRRC28Q86X40 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC5.33□□□□□ -1.56
LRRC28Q86X40 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
LRRC28Q86X40 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC5.33□□□□□ -1.56
LRRC28Q86X40 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.33□□□□□ -1.56
LRRC28Q86X40 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
LRRC28Q86X40 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC5.33□□□□□ -1.56
LRRC28Q86X40 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC5.33□□□□□ -1.56
LRRC28Q86X40 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
LRRC28Q86X40 MIR188-201ENST00000385034 86 ntBASIC5.33□□□□□ -1.56
LRRC28Q86X40 RBBP4P5-201ENST00000398583 1266 ntBASIC5.33□□□□□ -1.56
LRRC28Q86X40 AL157702.1-201ENST00000398764 426 ntBASIC5.33□□□□□ -1.56
LRRC28Q86X40 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC5.33□□□□□ -1.56
LRRC28Q86X40 RPL23AP60-201ENST00000450011 454 ntBASIC5.33□□□□□ -1.56
LRRC28Q86X40 AC124945.1-201ENST00000485133 188 ntBASIC5.33□□□□□ -1.56
LRRC28Q86X40 PDCL3P4-201ENST00000489621 720 ntBASIC5.33□□□□□ -1.56
LRRC28Q86X40 AC021006.1-201ENST00000489849 553 ntBASIC5.33□□□□□ -1.56
LRRC28Q86X40 RN7SL104P-201ENST00000498686 293 ntBASIC5.33□□□□□ -1.56
LRRC28Q86X40 GLUD1P3-202ENST00000508551 200 ntBASIC5.33□□□□□ -1.56
LRRC28Q86X40 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC5.33□□□□□ -1.56
LRRC28Q86X40 AC108103.1-201ENST00000511286 446 ntBASIC5.33□□□□□ -1.56
LRRC28Q86X40 SNORA70.11-201ENST00000515987 138 ntBASIC5.33□□□□□ -1.56
LRRC28Q86X40 SNORA70.13-201ENST00000516116 138 ntBASIC5.33□□□□□ -1.56
LRRC28Q86X40 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC5.33□□□□□ -1.56
LRRC28Q86X40 BCAS2P1-201ENST00000528022 632 ntBASIC5.33□□□□□ -1.56
LRRC28Q86X40 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC5.33□□□□□ -1.56
LRRC28Q86X40 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC5.33□□□□□ -1.56
LRRC28Q86X40 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.33□□□□□ -1.56
LRRC28Q86X40 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC5.33□□□□□ -1.56
LRRC28Q86X40 MIR4271-201ENST00000582451 67 ntBASIC5.33□□□□□ -1.56
LRRC28Q86X40 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC5.33□□□□□ -1.56
LRRC28Q86X40 AC006115.2-201ENST00000596823 202 ntBASIC5.33□□□□□ -1.56
LRRC28Q86X40 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC5.33□□□□□ -1.56
LRRC28Q86X40 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC5.33□□□□□ -1.56
LRRC28Q86X40 AC005618.4-201ENST00000625053 554 ntBASIC5.33□□□□□ -1.56
LRRC28Q86X40 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC5.33□□□□□ -1.56
LRRC28Q86X40 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 73.3 ms