Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.54□□□□□ -1.52
NHLRC1Q6VVB1 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.54□□□□□ -1.52
NHLRC1Q6VVB1 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
NHLRC1Q6VVB1 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC5.54□□□□□ -1.52
NHLRC1Q6VVB1 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
NHLRC1Q6VVB1 AC140134.1-201ENST00000511830 3544 ntBASIC5.54□□□□□ -1.52
NHLRC1Q6VVB1 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC5.54□□□□□ -1.52
NHLRC1Q6VVB1 AL731532.1-201ENST00000623972 4236 ntBASIC5.54□□□□□ -1.52
NHLRC1Q6VVB1 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC5.54□□□□□ -1.52
NHLRC1Q6VVB1 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
NHLRC1Q6VVB1 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
NHLRC1Q6VVB1 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
NHLRC1Q6VVB1 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
NHLRC1Q6VVB1 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC5.54□□□□□ -1.52
NHLRC1Q6VVB1 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC5.54□□□□□ -1.52
NHLRC1Q6VVB1 AC011416.1-201ENST00000514947 1732 ntBASIC5.54□□□□□ -1.52
NHLRC1Q6VVB1 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC5.54□□□□□ -1.52
NHLRC1Q6VVB1 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
NHLRC1Q6VVB1 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC5.53□□□□□ -1.52
NHLRC1Q6VVB1 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
NHLRC1Q6VVB1 NAT2-201ENST00000286479 1322 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
NHLRC1Q6VVB1 SAMMSON-210ENST00000641260 1308 ntBASIC5.53□□□□□ -1.52
NHLRC1Q6VVB1 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC5.53□□□□□ -1.52
NHLRC1Q6VVB1 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
NHLRC1Q6VVB1 CLC-201ENST00000221804 635 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
NHLRC1Q6VVB1 C3orf14-201ENST00000232519 690 ntAPPRIS P1 TSL 3 BASIC5.53□□□□□ -1.52
NHLRC1Q6VVB1 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
NHLRC1Q6VVB1 YWHAZP4-201ENST00000392459 708 ntBASIC5.53□□□□□ -1.52
NHLRC1Q6VVB1 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC5.53□□□□□ -1.52
NHLRC1Q6VVB1 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC5.53□□□□□ -1.52
NHLRC1Q6VVB1 RN7SKP151-201ENST00000410230 316 ntBASIC5.53□□□□□ -1.52
NHLRC1Q6VVB1 RN7SKP146-201ENST00000410242 334 ntBASIC5.53□□□□□ -1.52
NHLRC1Q6VVB1 VN1R20P-201ENST00000425215 966 ntBASIC5.53□□□□□ -1.52
NHLRC1Q6VVB1 AL590399.4-201ENST00000436561 601 ntBASIC5.53□□□□□ -1.52
NHLRC1Q6VVB1 AC108066.1-201ENST00000437261 596 ntTSL 4 BASIC5.53□□□□□ -1.52
NHLRC1Q6VVB1 LINC02384-202ENST00000441255 567 ntTSL 4 BASIC5.53□□□□□ -1.52
NHLRC1Q6VVB1 CXCR2P1-202ENST00000443392 1074 ntBASIC5.53□□□□□ -1.52
NHLRC1Q6VVB1 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC5.53□□□□□ -1.52
NHLRC1Q6VVB1 AC095033.1-201ENST00000451611 1096 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
NHLRC1Q6VVB1 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC5.53□□□□□ -1.52
NHLRC1Q6VVB1 AC098583.1-201ENST00000480875 255 ntBASIC5.53□□□□□ -1.52
NHLRC1Q6VVB1 AL035690.1-201ENST00000490892 383 ntBASIC5.53□□□□□ -1.52
NHLRC1Q6VVB1 LINC02114-201ENST00000503757 801 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
NHLRC1Q6VVB1 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC5.53□□□□□ -1.52
NHLRC1Q6VVB1 CYP4F27P-201ENST00000514557 494 ntBASIC5.53□□□□□ -1.52
NHLRC1Q6VVB1 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC5.53□□□□□ -1.52
NHLRC1Q6VVB1 AP003100.1-201ENST00000524772 832 ntTSL 3 BASIC5.53□□□□□ -1.52
NHLRC1Q6VVB1 OR7E10P-201ENST00000526420 991 ntBASIC5.53□□□□□ -1.52
NHLRC1Q6VVB1 OLR1-210ENST00000544577 924 ntTSL 5 BASIC5.53□□□□□ -1.52
NHLRC1Q6VVB1 AC009387.1-201ENST00000549163 441 ntTSL 3 BASIC5.53□□□□□ -1.52
NHLRC1Q6VVB1 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC5.53□□□□□ -1.52
NHLRC1Q6VVB1 AC084782.2-201ENST00000561934 839 ntTSL 3 BASIC5.53□□□□□ -1.52
NHLRC1Q6VVB1 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC5.53□□□□□ -1.52
NHLRC1Q6VVB1 MT1CP-201ENST00000567054 174 ntBASIC5.53□□□□□ -1.52
NHLRC1Q6VVB1 AC090651.1-201ENST00000567865 634 ntBASIC5.53□□□□□ -1.52
NHLRC1Q6VVB1 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC5.53□□□□□ -1.52
NHLRC1Q6VVB1 AC004232.2-201ENST00000574245 821 ntBASIC5.53□□□□□ -1.52
NHLRC1Q6VVB1 FAM60CP-201ENST00000591086 664 ntBASIC5.53□□□□□ -1.52
NHLRC1Q6VVB1 AP002884.5-201ENST00000595053 1132 ntBASIC5.53□□□□□ -1.52
NHLRC1Q6VVB1 AP000654.1-201ENST00000602510 1192 ntTSL 5 BASIC5.53□□□□□ -1.52
NHLRC1Q6VVB1 AC027334.1-201ENST00000603257 310 ntBASIC5.53□□□□□ -1.52
NHLRC1Q6VVB1 AC067838.1-201ENST00000606064 577 ntBASIC5.53□□□□□ -1.52
NHLRC1Q6VVB1 AL080312.2-201ENST00000613001 630 ntBASIC5.53□□□□□ -1.52
NHLRC1Q6VVB1 AL137067.2-201ENST00000621202 131 ntBASIC5.53□□□□□ -1.52
NHLRC1Q6VVB1 MIR6813-201ENST00000621638 56 ntBASIC5.53□□□□□ -1.52
NHLRC1Q6VVB1 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
NHLRC1Q6VVB1 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC5.53□□□□□ -1.52
NHLRC1Q6VVB1 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC5.53□□□□□ -1.52
NHLRC1Q6VVB1 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC5.53□□□□□ -1.52
NHLRC1Q6VVB1 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
NHLRC1Q6VVB1 AC018717.1-201ENST00000457712 1505 ntBASIC5.53□□□□□ -1.52
NHLRC1Q6VVB1 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC5.53□□□□□ -1.52
NHLRC1Q6VVB1 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
NHLRC1Q6VVB1 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
NHLRC1Q6VVB1 AC007342.5-201ENST00000571340 2142 ntBASIC5.53□□□□□ -1.52
NHLRC1Q6VVB1 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
NHLRC1Q6VVB1 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC5.52□□□□□ -1.53
NHLRC1Q6VVB1 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
NHLRC1Q6VVB1 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
NHLRC1Q6VVB1 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
NHLRC1Q6VVB1 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC5.52□□□□□ -1.53
NHLRC1Q6VVB1 ATP5A1P4-201ENST00000556888 1605 ntBASIC5.52□□□□□ -1.53
NHLRC1Q6VVB1 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
NHLRC1Q6VVB1 DNM1P47-203ENST00000571780 12667 ntBASIC5.52□□□□□ -1.53
NHLRC1Q6VVB1 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
NHLRC1Q6VVB1 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
NHLRC1Q6VVB1 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
NHLRC1Q6VVB1 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
NHLRC1Q6VVB1 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
NHLRC1Q6VVB1 RNA5SP110-201ENST00000362638 115 ntBASIC5.52□□□□□ -1.53
NHLRC1Q6VVB1 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
NHLRC1Q6VVB1 MIR191-201ENST00000384873 92 ntBASIC5.52□□□□□ -1.53
NHLRC1Q6VVB1 AL035422.1-201ENST00000414193 397 ntBASIC5.52□□□□□ -1.53
NHLRC1Q6VVB1 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC5.52□□□□□ -1.53
NHLRC1Q6VVB1 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC5.52□□□□□ -1.53
NHLRC1Q6VVB1 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC5.52□□□□□ -1.53
NHLRC1Q6VVB1 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC5.52□□□□□ -1.53
NHLRC1Q6VVB1 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC5.52□□□□□ -1.53
NHLRC1Q6VVB1 AL512593.1-201ENST00000444758 779 ntBASIC5.52□□□□□ -1.53
NHLRC1Q6VVB1 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 71.4 ms