Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 AC093084.1-201ENST00000424233 687 ntBASIC5.51□□□□□ -1.53
SCN1BQ07699 YY1P1-201ENST00000427625 668 ntBASIC5.51□□□□□ -1.53
SCN1BQ07699 AC073410.1-201ENST00000435125 589 ntBASIC5.51□□□□□ -1.53
SCN1BQ07699 RPS3AP38-201ENST00000435889 763 ntBASIC5.51□□□□□ -1.53
SCN1BQ07699 LRTOMT-209ENST00000440313 253 ntTSL 3 BASIC5.51□□□□□ -1.53
SCN1BQ07699 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC5.51□□□□□ -1.53
SCN1BQ07699 AL356133.1-201ENST00000444762 372 ntBASIC5.51□□□□□ -1.53
SCN1BQ07699 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC5.51□□□□□ -1.53
SCN1BQ07699 TREML3P-201ENST00000457327 501 ntBASIC5.51□□□□□ -1.53
SCN1BQ07699 RN7SKP198-201ENST00000459286 306 ntBASIC5.51□□□□□ -1.53
SCN1BQ07699 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC5.51□□□□□ -1.53
SCN1BQ07699 RNA5SP400-201ENST00000517155 111 ntBASIC5.51□□□□□ -1.53
SCN1BQ07699 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC5.51□□□□□ -1.53
SCN1BQ07699 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC5.51□□□□□ -1.53
SCN1BQ07699 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC5.51□□□□□ -1.53
SCN1BQ07699 OR4V1P-201ENST00000525394 1140 ntBASIC5.51□□□□□ -1.53
SCN1BQ07699 AC109635.6-201ENST00000525487 1113 ntBASIC5.51□□□□□ -1.53
SCN1BQ07699 OR8Q1P-201ENST00000526467 655 ntBASIC5.51□□□□□ -1.53
SCN1BQ07699 AC020611.2-201ENST00000535594 671 ntTSL 3 BASIC5.51□□□□□ -1.53
SCN1BQ07699 CBX5-204ENST00000550411 894 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SCN1BQ07699 AL356017.1-201ENST00000556796 594 ntTSL 4 BASIC5.51□□□□□ -1.53
SCN1BQ07699 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC5.51□□□□□ -1.53
SCN1BQ07699 AC092868.3-201ENST00000560515 784 ntBASIC5.51□□□□□ -1.53
SCN1BQ07699 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC5.51□□□□□ -1.53
SCN1BQ07699 AC084782.2-201ENST00000561934 839 ntTSL 3 BASIC5.51□□□□□ -1.53
SCN1BQ07699 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC5.51□□□□□ -1.53
SCN1BQ07699 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC5.51□□□□□ -1.53
SCN1BQ07699 ZNF677-211ENST00000601828 719 ntTSL 2 BASIC5.51□□□□□ -1.53
SCN1BQ07699 BMS1P14-201ENST00000615056 606 ntTSL 5 BASIC5.51□□□□□ -1.53
SCN1BQ07699 AC074140.1-201ENST00000621617 208 ntBASIC5.51□□□□□ -1.53
SCN1BQ07699 AC005514.1-201ENST00000623521 208 ntBASIC5.51□□□□□ -1.53
SCN1BQ07699 BANCR-201ENST00000624238 473 ntTSL 2 BASIC5.51□□□□□ -1.53
SCN1BQ07699 AC073488.9-201ENST00000631601 754 ntBASIC5.51□□□□□ -1.53
SCN1BQ07699 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SCN1BQ07699 AP000473.2-201ENST00000602659 1537 ntBASIC5.51□□□□□ -1.53
SCN1BQ07699 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SCN1BQ07699 AC007878.1-201ENST00000434786 1615 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SCN1BQ07699 AC010132.4-201ENST00000569883 1368 ntBASIC5.51□□□□□ -1.53
SCN1BQ07699 SPANXN2-201ENST00000598475 1378 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SCN1BQ07699 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
SCN1BQ07699 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
SCN1BQ07699 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SCN1BQ07699 AC004023.1-201ENST00000561473 1744 ntBASIC5.51□□□□□ -1.53
SCN1BQ07699 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SCN1BQ07699 AP005435.3-201ENST00000531260 3198 ntBASIC5.51□□□□□ -1.53
SCN1BQ07699 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SCN1BQ07699 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
SCN1BQ07699 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
SCN1BQ07699 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
SCN1BQ07699 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SCN1BQ07699 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.5□□□□□ -1.53
SCN1BQ07699 KRTAP19-6-201ENST00000334046 330 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
SCN1BQ07699 OR6P1-201ENST00000334632 954 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
SCN1BQ07699 PLAC1-201ENST00000359237 1131 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
SCN1BQ07699 RNU6-249P-201ENST00000363016 102 ntBASIC5.5□□□□□ -1.53
SCN1BQ07699 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC5.5□□□□□ -1.53
SCN1BQ07699 SNORA5.1-201ENST00000384275 131 ntBASIC5.5□□□□□ -1.53
SCN1BQ07699 GNRHR-202ENST00000420975 859 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SCN1BQ07699 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC5.5□□□□□ -1.53
SCN1BQ07699 AL356806.1-201ENST00000422524 916 ntBASIC5.5□□□□□ -1.53
SCN1BQ07699 KIF4CP-201ENST00000422742 1279 ntBASIC5.5□□□□□ -1.53
SCN1BQ07699 SETP10-201ENST00000424368 814 ntBASIC5.5□□□□□ -1.53
SCN1BQ07699 AHCYP8-201ENST00000425108 209 ntBASIC5.5□□□□□ -1.53
SCN1BQ07699 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC5.5□□□□□ -1.53
SCN1BQ07699 IGLV3-4-201ENST00000432300 244 ntBASIC5.5□□□□□ -1.53
SCN1BQ07699 ATP6V1G1P4-201ENST00000438388 335 ntBASIC5.5□□□□□ -1.53
SCN1BQ07699 LIX1L-AS1-206ENST00000447686 846 ntTSL 2 BASIC5.5□□□□□ -1.53
SCN1BQ07699 NDUFA5P8-201ENST00000449019 346 ntBASIC5.5□□□□□ -1.53
SCN1BQ07699 MORF4L1P4-201ENST00000450245 976 ntBASIC5.5□□□□□ -1.53
SCN1BQ07699 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC5.5□□□□□ -1.53
SCN1BQ07699 AL356157.1-201ENST00000456722 732 ntTSL 3 BASIC5.5□□□□□ -1.53
SCN1BQ07699 HNRNPDLP3-201ENST00000456745 380 ntBASIC5.5□□□□□ -1.53
SCN1BQ07699 RPL19P11-201ENST00000495944 589 ntBASIC5.5□□□□□ -1.53
SCN1BQ07699 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC5.5□□□□□ -1.53
SCN1BQ07699 AC106800.3-201ENST00000511389 308 ntBASIC5.5□□□□□ -1.53
SCN1BQ07699 AC134698.1-201ENST00000511619 643 ntBASIC5.5□□□□□ -1.53
SCN1BQ07699 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC5.5□□□□□ -1.53
SCN1BQ07699 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC5.5□□□□□ -1.53
SCN1BQ07699 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC5.5□□□□□ -1.53
SCN1BQ07699 AC067904.2-201ENST00000517322 1283 ntBASIC5.5□□□□□ -1.53
SCN1BQ07699 IGLVVII-41-1-201ENST00000518405 151 ntBASIC5.5□□□□□ -1.53
SCN1BQ07699 AC018442.3-201ENST00000523025 183 ntBASIC5.5□□□□□ -1.53
SCN1BQ07699 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC5.5□□□□□ -1.53
SCN1BQ07699 LRTOMT-217ENST00000539587 428 ntTSL 2 BASIC5.5□□□□□ -1.53
SCN1BQ07699 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC5.5□□□□□ -1.53
SCN1BQ07699 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC5.5□□□□□ -1.53
SCN1BQ07699 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC5.5□□□□□ -1.53
SCN1BQ07699 GNG2-203ENST00000553432 577 ntTSL 4 BASIC5.5□□□□□ -1.53
SCN1BQ07699 PPIAL4A-201ENST00000577856 660 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
SCN1BQ07699 MIR3189-201ENST00000578735 73 ntBASIC5.5□□□□□ -1.53
SCN1BQ07699 ZNF431-203ENST00000594425 610 ntTSL 2 BASIC5.5□□□□□ -1.53
SCN1BQ07699 AC091133.5-201ENST00000603088 301 ntBASIC5.5□□□□□ -1.53
SCN1BQ07699 SNORD96A-201ENST00000606577 79 ntBASIC5.5□□□□□ -1.53
SCN1BQ07699 LIPF-205ENST00000608620 1290 ntTSL 2 BASIC5.5□□□□□ -1.53
SCN1BQ07699 AL589182.1-201ENST00000611785 320 ntTSL 5 BASIC5.5□□□□□ -1.53
SCN1BQ07699 Metazoa_SRP.195-201ENST00000612667 287 ntBASIC5.5□□□□□ -1.53
SCN1BQ07699 AC003992.1-201ENST00000635364 557 ntBASIC5.5□□□□□ -1.53
SCN1BQ07699 MBD5-221ENST00000637159 902 ntTSL 5 BASIC5.5□□□□□ -1.53
SCN1BQ07699 AC087565.2-201ENST00000637695 952 ntTSL 5 BASIC5.5□□□□□ -1.53
SCN1BQ07699 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC5.5□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms