Protein–RNA interactions for Protein: Q04656

ATP7A, Copper-transporting ATPase 1, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP7AQ04656 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC8.57□□□□□ -1.04
ATP7AQ04656 AC108449.2-201ENST00000560865 552 ntTSL 3 BASIC8.57□□□□□ -1.04
ATP7AQ04656 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC8.57□□□□□ -1.04
ATP7AQ04656 AC010245.2-201ENST00000606908 1167 ntBASIC8.57□□□□□ -1.04
ATP7AQ04656 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC8.57□□□□□ -1.04
ATP7AQ04656 FBXW7-203ENST00000296555 3572 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
ATP7AQ04656 ANKFY1-201ENST00000341657 7418 ntAPPRIS ALT1 TSL 5 BASIC8.57□□□□□ -1.04
ATP7AQ04656 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC8.57□□□□□ -1.04
ATP7AQ04656 ARPP21-203ENST00000396482 2416 ntTSL 2 BASIC8.57□□□□□ -1.04
ATP7AQ04656 AC008957.3-201ENST00000624112 2242 ntBASIC8.57□□□□□ -1.04
ATP7AQ04656 AC023421.1-201ENST00000590535 1785 ntBASIC8.56□□□□□ -1.04
ATP7AQ04656 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC8.56□□□□□ -1.04
ATP7AQ04656 TBCK-201ENST00000273980 8101 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.04
ATP7AQ04656 RIOK2-202ENST00000508447 2149 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
ATP7AQ04656 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC8.56□□□□□ -1.04
ATP7AQ04656 AL589647.1-201ENST00000402485 466 ntBASIC8.56□□□□□ -1.04
ATP7AQ04656 AL390774.1-201ENST00000411924 246 ntBASIC8.56□□□□□ -1.04
ATP7AQ04656 RPS6P23-201ENST00000413224 722 ntBASIC8.56□□□□□ -1.04
ATP7AQ04656 NIFKP3-201ENST00000417799 865 ntBASIC8.56□□□□□ -1.04
ATP7AQ04656 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC8.56□□□□□ -1.04
ATP7AQ04656 PSMD10P3-201ENST00000437000 448 ntBASIC8.56□□□□□ -1.04
ATP7AQ04656 ELOCP3-201ENST00000439303 348 ntBASIC8.56□□□□□ -1.04
ATP7AQ04656 AC072052.1-201ENST00000496556 306 ntBASIC8.56□□□□□ -1.04
ATP7AQ04656 AC105384.2-201ENST00000508433 640 ntBASIC8.56□□□□□ -1.04
ATP7AQ04656 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC8.56□□□□□ -1.04
ATP7AQ04656 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC8.56□□□□□ -1.04
ATP7AQ04656 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC8.56□□□□□ -1.04
ATP7AQ04656 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC8.56□□□□□ -1.04
ATP7AQ04656 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC8.56□□□□□ -1.04
ATP7AQ04656 ARHGAP28-201ENST00000262227 5369 ntAPPRIS ALT2 TSL 1 (best) BASIC8.56□□□□□ -1.04
ATP7AQ04656 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC8.56□□□□□ -1.04
ATP7AQ04656 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC8.56□□□□□ -1.04
ATP7AQ04656 MIPOL1-201ENST00000327441 7185 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
ATP7AQ04656 KLF18-201ENST00000634670 3159 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.04
ATP7AQ04656 NBPF9-206ENST00000613969 4624 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
ATP7AQ04656 MAP4K4-219ENST00000625522 7458 ntAPPRIS P5 TSL 5 BASIC8.56□□□□□ -1.04
ATP7AQ04656 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
ATP7AQ04656 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
ATP7AQ04656 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC8.56□□□□□ -1.04
ATP7AQ04656 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC8.56□□□□□ -1.04
ATP7AQ04656 KCNMA1-266ENST00000639601 11920 ntAPPRIS ALT2 TSL 5 BASIC8.55□□□□□ -1.04
ATP7AQ04656 OR51E1-201ENST00000396952 3612 ntAPPRIS P1 BASIC8.55□□□□□ -1.04
ATP7AQ04656 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
ATP7AQ04656 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC8.55□□□□□ -1.04
ATP7AQ04656 MIR133B-201ENST00000362210 119 ntBASIC8.55□□□□□ -1.04
ATP7AQ04656 RNA5SP335-201ENST00000363817 110 ntBASIC8.55□□□□□ -1.04
ATP7AQ04656 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC8.55□□□□□ -1.04
ATP7AQ04656 AC108161.1-201ENST00000461060 402 ntBASIC8.55□□□□□ -1.04
ATP7AQ04656 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC8.55□□□□□ -1.04
ATP7AQ04656 CYP4F27P-201ENST00000514557 494 ntBASIC8.55□□□□□ -1.04
ATP7AQ04656 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC8.55□□□□□ -1.04
ATP7AQ04656 AC020765.1-201ENST00000604296 328 ntBASIC8.55□□□□□ -1.04
ATP7AQ04656 AL049539.1-201ENST00000611964 459 ntBASIC8.55□□□□□ -1.04
ATP7AQ04656 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC8.55□□□□□ -1.04
ATP7AQ04656 AC073342.3-201ENST00000624211 193 ntBASIC8.55□□□□□ -1.04
ATP7AQ04656 MFSD8-219ENST00000641228 2559 ntBASIC8.55□□□□□ -1.04
ATP7AQ04656 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC8.55□□□□□ -1.04
ATP7AQ04656 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC8.55□□□□□ -1.04
ATP7AQ04656 SLC17A8-201ENST00000323346 3983 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
ATP7AQ04656 LINC01128-205ENST00000445118 6606 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
ATP7AQ04656 AC005821.1-203ENST00000577270 3145 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
ATP7AQ04656 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC8.55□□□□□ -1.04
ATP7AQ04656 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC8.55□□□□□ -1.04
ATP7AQ04656 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
ATP7AQ04656 KPNA1-201ENST00000344337 6830 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
ATP7AQ04656 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
ATP7AQ04656 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC8.55□□□□□ -1.04
ATP7AQ04656 TMEM269-204ENST00000637012 3354 ntAPPRIS ALT2 TSL 5 BASIC8.55□□□□□ -1.04
ATP7AQ04656 ATOX1-203ENST00000521264 4341 ntTSL 2 BASIC8.55□□□□□ -1.04
ATP7AQ04656 AP2B1-215ENST00000616681 3267 ntTSL 2 BASIC8.55□□□□□ -1.04
ATP7AQ04656 HSD17B13-201ENST00000302219 2269 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
ATP7AQ04656 AC093010.2-202ENST00000493033 3023 ntTSL 2 BASIC8.55□□□□□ -1.04
ATP7AQ04656 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC8.55□□□□□ -1.04
ATP7AQ04656 AC005294.1-201ENST00000355509 281 ntBASIC8.54□□□□□ -1.04
ATP7AQ04656 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
ATP7AQ04656 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC8.54□□□□□ -1.04
ATP7AQ04656 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC8.54□□□□□ -1.04
ATP7AQ04656 RPL7P61-201ENST00000451721 751 ntBASIC8.54□□□□□ -1.04
ATP7AQ04656 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC8.54□□□□□ -1.04
ATP7AQ04656 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
ATP7AQ04656 AL035690.1-201ENST00000490892 383 ntBASIC8.54□□□□□ -1.04
ATP7AQ04656 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC8.54□□□□□ -1.04
ATP7AQ04656 AC110775.1-201ENST00000513721 462 ntBASIC8.54□□□□□ -1.04
ATP7AQ04656 AC132068.1-201ENST00000623805 459 ntBASIC8.54□□□□□ -1.04
ATP7AQ04656 AP001784.1-201ENST00000624107 428 ntBASIC8.54□□□□□ -1.04
ATP7AQ04656 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
ATP7AQ04656 SLC14A1-201ENST00000321925 3971 ntAPPRIS P3 TSL 1 (best) BASIC8.54□□□□□ -1.04
ATP7AQ04656 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC8.54□□□□□ -1.04
ATP7AQ04656 LIPG-201ENST00000261292 10441 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
ATP7AQ04656 GSTCD-201ENST00000360505 2154 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
ATP7AQ04656 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC8.54□□□□□ -1.04
ATP7AQ04656 HDAC9-214ENST00000441542 3210 ntAPPRIS P4 TSL 1 (best) BASIC8.54□□□□□ -1.04
ATP7AQ04656 AL353763.1-201ENST00000624467 1628 ntBASIC8.54□□□□□ -1.04
ATP7AQ04656 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
ATP7AQ04656 NIN-204ENST00000382043 4216 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
ATP7AQ04656 ECT2-206ENST00000417960 4363 ntAPPRIS ALT1 TSL 1 (best) BASIC8.54□□□□□ -1.04
ATP7AQ04656 USP9YP3-201ENST00000434481 1766 ntBASIC8.54□□□□□ -1.04
ATP7AQ04656 NBPF11-202ENST00000614015 4630 ntAPPRIS P2 TSL 2 BASIC8.54□□□□□ -1.04
ATP7AQ04656 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
ATP7AQ04656 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 116.4 ms