Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 AC092681.1-201ENST00000297369 291 ntBASIC4.52□□□□□ -1.69
CCL20P78556 FHIT-201ENST00000341848 174 ntTSL 3 BASIC4.52□□□□□ -1.69
CCL20P78556 RNA5SP326-201ENST00000363209 110 ntBASIC4.52□□□□□ -1.69
CCL20P78556 MIR188-201ENST00000385034 86 ntBASIC4.52□□□□□ -1.69
CCL20P78556 TRBV6-7-201ENST00000390373 344 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
CCL20P78556 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
CCL20P78556 SDHC-203ENST00000392169 369 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CCL20P78556 AC019178.1-201ENST00000392337 440 ntBASIC4.52□□□□□ -1.69
CCL20P78556 EEF1GP6-201ENST00000402309 905 ntBASIC4.52□□□□□ -1.69
CCL20P78556 SOD1P1-201ENST00000407803 440 ntBASIC4.52□□□□□ -1.69
CCL20P78556 CTSL3P-202ENST00000412179 788 ntBASIC4.52□□□□□ -1.69
CCL20P78556 CLIC4P3-201ENST00000422221 752 ntBASIC4.52□□□□□ -1.69
CCL20P78556 VN1R21P-201ENST00000426703 765 ntBASIC4.52□□□□□ -1.69
CCL20P78556 RPL3P11-201ENST00000434028 1146 ntBASIC4.52□□□□□ -1.69
CCL20P78556 CHCHD4P5-201ENST00000436684 427 ntBASIC4.52□□□□□ -1.69
CCL20P78556 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC4.52□□□□□ -1.69
CCL20P78556 ZNF619P1-201ENST00000446539 752 ntBASIC4.52□□□□□ -1.69
CCL20P78556 AL022068.1-208ENST00000447250 1016 ntTSL 2 BASIC4.52□□□□□ -1.69
CCL20P78556 AC097359.1-201ENST00000447946 463 ntBASIC4.52□□□□□ -1.69
CCL20P78556 OR52E3P-201ENST00000452083 936 ntBASIC4.52□□□□□ -1.69
CCL20P78556 RN7SL314P-201ENST00000490735 292 ntBASIC4.52□□□□□ -1.69
CCL20P78556 AC010655.2-201ENST00000493710 662 ntTSL 3 BASIC4.52□□□□□ -1.69
CCL20P78556 RN7SL445P-201ENST00000495609 293 ntBASIC4.52□□□□□ -1.69
CCL20P78556 KHDC1P1-201ENST00000511053 508 ntBASIC4.52□□□□□ -1.69
CCL20P78556 AC093664.1-201ENST00000511779 289 ntBASIC4.52□□□□□ -1.69
CCL20P78556 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC4.52□□□□□ -1.69
CCL20P78556 LINC02506-201ENST00000513211 734 ntTSL 3 BASIC4.52□□□□□ -1.69
CCL20P78556 MAST4-IT1-201ENST00000514241 658 ntBASIC4.52□□□□□ -1.69
CCL20P78556 AC105345.2-201ENST00000515186 664 ntTSL 3 BASIC4.52□□□□□ -1.69
CCL20P78556 AC092709.1-201ENST00000521355 1045 ntBASIC4.52□□□□□ -1.69
CCL20P78556 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC4.52□□□□□ -1.69
CCL20P78556 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC4.52□□□□□ -1.69
CCL20P78556 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC4.52□□□□□ -1.69
CCL20P78556 AC136285.2-201ENST00000562873 378 ntTSL 3 BASIC4.52□□□□□ -1.69
CCL20P78556 MRPS21P8-201ENST00000569196 235 ntBASIC4.52□□□□□ -1.69
CCL20P78556 MIR4262-201ENST00000578394 54 ntBASIC4.52□□□□□ -1.69
CCL20P78556 RN7SL131P-201ENST00000579043 256 ntBASIC4.52□□□□□ -1.69
CCL20P78556 EXOSC3P2-201ENST00000594464 497 ntBASIC4.52□□□□□ -1.69
CCL20P78556 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC4.52□□□□□ -1.69
CCL20P78556 IGLCOR22-2-201ENST00000605398 313 ntBASIC4.52□□□□□ -1.69
CCL20P78556 AL589743.6-201ENST00000611025 117 ntBASIC4.52□□□□□ -1.69
CCL20P78556 MIR6834-201ENST00000622807 81 ntBASIC4.52□□□□□ -1.69
CCL20P78556 VIPR1-AS1-221ENST00000626992 602 ntTSL 5 BASIC4.52□□□□□ -1.69
CCL20P78556 DRG1-207ENST00000629688 309 ntTSL 5 BASIC4.52□□□□□ -1.69
CCL20P78556 KCNJ10-204ENST00000637644 1239 ntTSL 5 BASIC4.52□□□□□ -1.69
CCL20P78556 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC4.52□□□□□ -1.69
CCL20P78556 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
CCL20P78556 MTND5P12-201ENST00000502851 1449 ntBASIC4.52□□□□□ -1.69
CCL20P78556 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CCL20P78556 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC4.52□□□□□ -1.69
CCL20P78556 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC4.52□□□□□ -1.69
CCL20P78556 AC068870.1-201ENST00000563737 2455 ntBASIC4.52□□□□□ -1.69
CCL20P78556 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CCL20P78556 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CCL20P78556 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
CCL20P78556 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC4.52□□□□□ -1.69
CCL20P78556 MS4A6A-213ENST00000530839 1383 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
CCL20P78556 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC4.52□□□□□ -1.69
CCL20P78556 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
CCL20P78556 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC4.52□□□□□ -1.69
CCL20P78556 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC4.51□□□□□ -1.69
CCL20P78556 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC4.51□□□□□ -1.69
CCL20P78556 AC018717.1-201ENST00000457712 1505 ntBASIC4.51□□□□□ -1.69
CCL20P78556 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
CCL20P78556 LYPD6B-202ENST00000409029 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
CCL20P78556 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CCL20P78556 CEACAM1-213ENST00000599389 1342 ntTSL 5 BASIC4.51□□□□□ -1.69
CCL20P78556 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CCL20P78556 AL731532.2-201ENST00000623542 1953 ntBASIC4.51□□□□□ -1.69
CCL20P78556 AL031595.2-201ENST00000624215 19071 ntBASIC4.51□□□□□ -1.69
CCL20P78556 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
CCL20P78556 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC4.51□□□□□ -1.69
CCL20P78556 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CCL20P78556 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CCL20P78556 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC4.51□□□□□ -1.69
CCL20P78556 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CCL20P78556 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC4.51□□□□□ -1.69
CCL20P78556 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC4.51□□□□□ -1.69
CCL20P78556 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC4.51□□□□□ -1.69
CCL20P78556 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC4.51□□□□□ -1.69
CCL20P78556 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CCL20P78556 OR5B2-201ENST00000302581 1049 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
CCL20P78556 RNA5SP301-201ENST00000362537 121 ntBASIC4.51□□□□□ -1.69
CCL20P78556 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CCL20P78556 HHLA3-203ENST00000370940 775 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
CCL20P78556 RNA5SP241-201ENST00000391326 114 ntBASIC4.51□□□□□ -1.69
CCL20P78556 S100B-203ENST00000397648 839 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CCL20P78556 AL157702.1-201ENST00000398764 426 ntBASIC4.51□□□□□ -1.69
CCL20P78556 HIBCH-207ENST00000410045 854 ntTSL 3 BASIC4.51□□□□□ -1.69
CCL20P78556 RPL21P50-201ENST00000417698 477 ntBASIC4.51□□□□□ -1.69
CCL20P78556 DPPA2P2-201ENST00000418220 897 ntBASIC4.51□□□□□ -1.69
CCL20P78556 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC4.51□□□□□ -1.69
CCL20P78556 GTF3AP6-201ENST00000432585 986 ntBASIC4.51□□□□□ -1.69
CCL20P78556 AL162231.2-201ENST00000434627 665 ntTSL 2 BASIC4.51□□□□□ -1.69
CCL20P78556 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC4.51□□□□□ -1.69
CCL20P78556 EMC3-AS1-205ENST00000438698 534 ntBASIC4.51□□□□□ -1.69
CCL20P78556 AL022157.1-201ENST00000439622 665 ntTSL 2 BASIC4.51□□□□□ -1.69
CCL20P78556 OR52I1-201ENST00000450052 1050 ntBASIC4.51□□□□□ -1.69
CCL20P78556 AC016027.4-201ENST00000450866 277 ntBASIC4.51□□□□□ -1.69
CCL20P78556 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 94.6 ms