Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC5.98□□□□□ -1.45
CLRN1P58418 AC020978.2-201ENST00000563203 428 ntTSL 3 BASIC5.98□□□□□ -1.45
CLRN1P58418 AC009094.1-201ENST00000564443 426 ntBASIC5.98□□□□□ -1.45
CLRN1P58418 AC005951.1-201ENST00000576706 485 ntBASIC5.98□□□□□ -1.45
CLRN1P58418 LINC00906-202ENST00000587998 648 ntTSL 3 BASIC5.98□□□□□ -1.45
CLRN1P58418 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC5.98□□□□□ -1.45
CLRN1P58418 ZRANB2-AS2-215ENST00000596952 624 ntTSL 5 BASIC5.98□□□□□ -1.45
CLRN1P58418 Z98949.1-210ENST00000597548 766 ntTSL 5 BASIC5.98□□□□□ -1.45
CLRN1P58418 AC097467.3-210ENST00000597939 705 ntTSL 5 BASIC5.98□□□□□ -1.45
CLRN1P58418 AL358072.1-201ENST00000604156 575 ntBASIC5.98□□□□□ -1.45
CLRN1P58418 AC139493.1-201ENST00000604368 397 ntBASIC5.98□□□□□ -1.45
CLRN1P58418 Metazoa_SRP.129-201ENST00000619776 251 ntBASIC5.98□□□□□ -1.45
CLRN1P58418 AP000577.1-201ENST00000624366 878 ntBASIC5.98□□□□□ -1.45
CLRN1P58418 LGI1-209ENST00000627699 664 ntTSL 3 BASIC5.98□□□□□ -1.45
CLRN1P58418 UGP2-232ENST00000640075 567 ntTSL 5 BASIC5.98□□□□□ -1.45
CLRN1P58418 OR8G3P-202ENST00000641572 1255 ntBASIC5.98□□□□□ -1.45
CLRN1P58418 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
CLRN1P58418 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC5.98□□□□□ -1.45
CLRN1P58418 NDC80-201ENST00000261597 2172 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
CLRN1P58418 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
CLRN1P58418 ZNF227-213ENST00000621083 3055 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
CLRN1P58418 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
CLRN1P58418 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
CLRN1P58418 AL139384.2-201ENST00000613809 3590 ntBASIC5.98□□□□□ -1.45
CLRN1P58418 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
CLRN1P58418 RAI14-228ENST00000515799 3486 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
CLRN1P58418 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
CLRN1P58418 SORBS1-202ENST00000306402 5858 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
CLRN1P58418 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
CLRN1P58418 ZNF559-ZNF177-202ENST00000446085 2470 ntTSL 5 BASIC5.98□□□□□ -1.45
CLRN1P58418 ZNF812P-201ENST00000457674 1694 ntBASIC5.98□□□□□ -1.45
CLRN1P58418 AC007012.2-201ENST00000623206 1676 ntBASIC5.98□□□□□ -1.45
CLRN1P58418 AC007485.2-201ENST00000623493 1667 ntBASIC5.98□□□□□ -1.45
CLRN1P58418 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC5.98□□□□□ -1.45
CLRN1P58418 HRG-201ENST00000232003 2015 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
CLRN1P58418 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC5.97□□□□□ -1.45
CLRN1P58418 OR2AH1P-202ENST00000641232 2744 ntBASIC5.97□□□□□ -1.45
CLRN1P58418 ADH7-202ENST00000437033 2516 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
CLRN1P58418 ZNF410-202ENST00000334521 2193 ntTSL 5 BASIC5.97□□□□□ -1.45
CLRN1P58418 AC073342.2-201ENST00000595842 1800 ntBASIC5.97□□□□□ -1.45
CLRN1P58418 AC025809.2-201ENST00000625085 1802 ntBASIC5.97□□□□□ -1.45
CLRN1P58418 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC5.97□□□□□ -1.45
CLRN1P58418 FAM161A-202ENST00000404929 3762 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
CLRN1P58418 AC132825.1-201ENST00000463573 2247 ntBASIC5.97□□□□□ -1.45
CLRN1P58418 GDA-209ENST00000545168 5362 ntTSL 2 BASIC5.97□□□□□ -1.45
CLRN1P58418 OR1I1-201ENST00000209540 1242 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
CLRN1P58418 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
CLRN1P58418 RNA5SP302-201ENST00000364896 100 ntBASIC5.97□□□□□ -1.45
CLRN1P58418 MXI1-204ENST00000369612 879 ntTSL 3 BASIC5.97□□□□□ -1.45
CLRN1P58418 NQO1-202ENST00000379046 1105 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
CLRN1P58418 RNU6-31P-201ENST00000384388 108 ntBASIC5.97□□□□□ -1.45
CLRN1P58418 RNU6-1242P-201ENST00000391052 103 ntBASIC5.97□□□□□ -1.45
CLRN1P58418 SKINT1L-201ENST00000401057 817 ntBASIC5.97□□□□□ -1.45
CLRN1P58418 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC5.97□□□□□ -1.45
CLRN1P58418 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
CLRN1P58418 RN7SKP188-201ENST00000410789 317 ntBASIC5.97□□□□□ -1.45
CLRN1P58418 RN7SKP296-201ENST00000411185 341 ntBASIC5.97□□□□□ -1.45
CLRN1P58418 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
CLRN1P58418 AC007879.3-201ENST00000417096 556 ntTSL 4 BASIC5.97□□□□□ -1.45
CLRN1P58418 VNN3-205ENST00000417437 1117 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
CLRN1P58418 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC5.97□□□□□ -1.45
CLRN1P58418 MTND2P18-201ENST00000419962 1030 ntBASIC5.97□□□□□ -1.45
CLRN1P58418 RPS10P21-201ENST00000430654 475 ntBASIC5.97□□□□□ -1.45
CLRN1P58418 GTF2IP3-201ENST00000433887 494 ntBASIC5.97□□□□□ -1.45
CLRN1P58418 AC068888.2-201ENST00000435621 536 ntTSL 3 BASIC5.97□□□□□ -1.45
CLRN1P58418 MTND4P32-201ENST00000437189 1237 ntBASIC5.97□□□□□ -1.45
CLRN1P58418 RPS10P14-201ENST00000440748 502 ntBASIC5.97□□□□□ -1.45
CLRN1P58418 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC5.97□□□□□ -1.45
CLRN1P58418 AL353898.1-201ENST00000444055 238 ntBASIC5.97□□□□□ -1.45
CLRN1P58418 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC5.97□□□□□ -1.45
CLRN1P58418 LINC01832-201ENST00000446520 553 ntTSL 4 BASIC5.97□□□□□ -1.45
CLRN1P58418 LINC01831-201ENST00000449772 493 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
CLRN1P58418 AC026391.1-201ENST00000450677 537 ntTSL 3 BASIC5.97□□□□□ -1.45
CLRN1P58418 CYCSP42-201ENST00000450823 238 ntBASIC5.97□□□□□ -1.45
CLRN1P58418 LINC01364-201ENST00000452509 889 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
CLRN1P58418 RBMY2EP-202ENST00000456360 940 ntBASIC5.97□□□□□ -1.45
CLRN1P58418 FCRL2-205ENST00000469986 902 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
CLRN1P58418 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC5.97□□□□□ -1.45
CLRN1P58418 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC5.97□□□□□ -1.45
CLRN1P58418 AC073648.3-201ENST00000504939 925 ntBASIC5.97□□□□□ -1.45
CLRN1P58418 AC096754.1-201ENST00000508904 818 ntBASIC5.97□□□□□ -1.45
CLRN1P58418 B3GNTL1P1-201ENST00000509174 289 ntBASIC5.97□□□□□ -1.45
CLRN1P58418 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC5.97□□□□□ -1.45
CLRN1P58418 AC091849.1-201ENST00000509920 121 ntBASIC5.97□□□□□ -1.45
CLRN1P58418 AC139713.1-202ENST00000512366 460 ntBASIC5.97□□□□□ -1.45
CLRN1P58418 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC5.97□□□□□ -1.45
CLRN1P58418 LRRC6P1-201ENST00000532188 885 ntBASIC5.97□□□□□ -1.45
CLRN1P58418 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC5.97□□□□□ -1.45
CLRN1P58418 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC5.97□□□□□ -1.45
CLRN1P58418 RACGAP1-216ENST00000548961 387 ntTSL 3 BASIC5.97□□□□□ -1.45
CLRN1P58418 LINC02392-202ENST00000549313 574 ntTSL 4 BASIC5.97□□□□□ -1.45
CLRN1P58418 MIR4789-201ENST00000577469 82 ntBASIC5.97□□□□□ -1.45
CLRN1P58418 AC005244.1-201ENST00000582566 339 ntBASIC5.97□□□□□ -1.45
CLRN1P58418 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC5.97□□□□□ -1.45
CLRN1P58418 PPIAL4C-201ENST00000585245 600 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
CLRN1P58418 AC061975.8-201ENST00000587058 721 ntBASIC5.97□□□□□ -1.45
CLRN1P58418 AC011921.2-201ENST00000589465 152 ntBASIC5.97□□□□□ -1.45
CLRN1P58418 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC5.97□□□□□ -1.45
CLRN1P58418 AL953862.2-201ENST00000603089 820 ntBASIC5.97□□□□□ -1.45
CLRN1P58418 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC5.97□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 115.9 ms