Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC6.42□□□□□ -1.38
GFRA1P56159 ZNF549-204ENST00000602149 5505 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
GFRA1P56159 Metazoa_SRP.195-201ENST00000612667 287 ntBASIC6.42□□□□□ -1.38
GFRA1P56159 MIR6883-201ENST00000614952 78 ntBASIC6.42□□□□□ -1.38
GFRA1P56159 RNASE11-211ENST00000620912 883 ntAPPRIS P2 TSL 1 (best) BASIC6.42□□□□□ -1.38
GFRA1P56159 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC6.42□□□□□ -1.38
GFRA1P56159 AC024595.1-201ENST00000623088 387 ntBASIC6.42□□□□□ -1.38
GFRA1P56159 AL359757.1-201ENST00000623176 255 ntBASIC6.42□□□□□ -1.38
GFRA1P56159 LINC00251-201ENST00000627569 1055 ntTSL 3 BASIC6.42□□□□□ -1.38
GFRA1P56159 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC6.42□□□□□ -1.38
GFRA1P56159 AC084035.1-201ENST00000634543 607 ntBASIC6.42□□□□□ -1.38
GFRA1P56159 AC026108.1-201ENST00000635444 547 ntBASIC6.42□□□□□ -1.38
GFRA1P56159 AC087821.2-201ENST00000637086 450 ntBASIC6.42□□□□□ -1.38
GFRA1P56159 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC6.42□□□□□ -1.38
GFRA1P56159 OR2T6-202ENST00000641644 4670 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
GFRA1P56159 MFSD8-245ENST00000641743 948 ntBASIC6.42□□□□□ -1.38
GFRA1P56159 FBXW7-203ENST00000296555 3572 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
GFRA1P56159 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC6.42□□□□□ -1.38
GFRA1P56159 FBXO7-202ENST00000397426 1888 ntTSL 2 BASIC6.42□□□□□ -1.38
GFRA1P56159 SSR1-201ENST00000244763 9669 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
GFRA1P56159 HSP90AA2P-201ENST00000530115 2196 ntBASIC6.42□□□□□ -1.38
GFRA1P56159 LRRC28-201ENST00000301981 5971 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
GFRA1P56159 DNAJC5G-203ENST00000404433 1647 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
GFRA1P56159 AC090771.1-201ENST00000585803 1618 ntBASIC6.42□□□□□ -1.38
GFRA1P56159 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC6.42□□□□□ -1.38
GFRA1P56159 WDR19-207ENST00000506503 2513 ntTSL 2 BASIC6.42□□□□□ -1.38
GFRA1P56159 ACPP-201ENST00000336375 3125 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
GFRA1P56159 NPHP1-201ENST00000316534 3756 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
GFRA1P56159 AC068490.1-202ENST00000637384 3185 ntTSL 5 BASIC6.42□□□□□ -1.38
GFRA1P56159 GPR1-209ENST00000612892 2565 ntAPPRIS P1 TSL 4 BASIC6.42□□□□□ -1.38
GFRA1P56159 HSD17B13-201ENST00000302219 2269 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
GFRA1P56159 POF1B-202ENST00000373145 1972 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
GFRA1P56159 PSG6-201ENST00000187910 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
GFRA1P56159 EIF3L-203ENST00000412331 3220 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
GFRA1P56159 SLC30A6-201ENST00000282587 5089 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
GFRA1P56159 AC019197.1-202ENST00000414885 2639 ntTSL 5 BASIC6.42□□□□□ -1.38
GFRA1P56159 ALG13-224ENST00000610588 4175 ntTSL 2 BASIC6.42□□□□□ -1.38
GFRA1P56159 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
GFRA1P56159 KIAA1958-203ENST00000536272 7650 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
GFRA1P56159 KNL1-201ENST00000346991 9573 ntAPPRIS P4 TSL 1 (best) BASIC6.42□□□□□ -1.38
GFRA1P56159 POGZ-204ENST00000392723 6152 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
GFRA1P56159 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC6.42□□□□□ -1.38
GFRA1P56159 RAI14-208ENST00000506376 3091 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
GFRA1P56159 MID1-202ENST00000380779 6044 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
GFRA1P56159 UGT2B4-201ENST00000305107 2103 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
GFRA1P56159 OSBPL9P1-201ENST00000604744 1469 ntBASIC6.41□□□□□ -1.38
GFRA1P56159 MKKS-201ENST00000347364 6714 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
GFRA1P56159 ZG16-201ENST00000400752 3132 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
GFRA1P56159 MAPK10-392ENST00000642103 3126 ntAPPRIS P2 BASIC6.41□□□□□ -1.38
GFRA1P56159 LIN7A-204ENST00000552864 6112 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
GFRA1P56159 PSD3-220ENST00000615573 5843 ntTSL 5 BASIC6.41□□□□□ -1.38
GFRA1P56159 LINC02447-201ENST00000499242 1500 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
GFRA1P56159 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
GFRA1P56159 LRRC37A4P-201ENST00000579913 3243 ntTSL 2 BASIC6.41□□□□□ -1.38
GFRA1P56159 PZP-201ENST00000261336 4610 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
GFRA1P56159 ZNF107-206ENST00000620827 5685 ntAPPRIS P4 TSL 4 BASIC6.41□□□□□ -1.38
GFRA1P56159 ARHGAP42P4-201ENST00000549782 2934 ntBASIC6.41□□□□□ -1.38
GFRA1P56159 LIMA1-202ENST00000394943 3669 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
GFRA1P56159 PSMC6-218ENST00000606149 1560 ntAPPRIS ALT1 TSL 1 (best) BASIC6.41□□□□□ -1.38
GFRA1P56159 RGS7-201ENST00000348120 1980 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
GFRA1P56159 CNTN4-AS1-201ENST00000442749 1640 ntTSL 3 BASIC6.41□□□□□ -1.38
GFRA1P56159 C1QTNF7-201ENST00000295297 4516 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
GFRA1P56159 SULT1C3-201ENST00000329106 915 ntAPPRIS P1 TSL 2 BASIC6.41□□□□□ -1.38
GFRA1P56159 MIR525-201ENST00000384978 85 ntBASIC6.41□□□□□ -1.38
GFRA1P56159 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC6.41□□□□□ -1.38
GFRA1P56159 LINC02257-201ENST00000412445 605 ntTSL 2 BASIC6.41□□□□□ -1.38
GFRA1P56159 AC019130.1-201ENST00000413841 391 ntTSL 2 BASIC6.41□□□□□ -1.38
GFRA1P56159 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
GFRA1P56159 AL360013.1-201ENST00000419031 858 ntBASIC6.41□□□□□ -1.38
GFRA1P56159 OSTN-AS1-201ENST00000430375 515 ntTSL 5 BASIC6.41□□□□□ -1.38
GFRA1P56159 MIR181A1HG-202ENST00000432296 930 ntTSL 3 BASIC6.41□□□□□ -1.38
GFRA1P56159 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC6.41□□□□□ -1.38
GFRA1P56159 DEFA9P-201ENST00000433042 285 ntBASIC6.41□□□□□ -1.38
GFRA1P56159 AC027124.1-201ENST00000440852 466 ntBASIC6.41□□□□□ -1.38
GFRA1P56159 MTND3P1-201ENST00000441336 220 ntBASIC6.41□□□□□ -1.38
GFRA1P56159 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC6.41□□□□□ -1.38
GFRA1P56159 SEPT7P2-208ENST00000444755 505 ntTSL 3 BASIC6.41□□□□□ -1.38
GFRA1P56159 LRRC28-203ENST00000447360 1235 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
GFRA1P56159 AC005002.1-201ENST00000447458 540 ntBASIC6.41□□□□□ -1.38
GFRA1P56159 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC6.41□□□□□ -1.38
GFRA1P56159 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC6.41□□□□□ -1.38
GFRA1P56159 OR7E7P-201ENST00000455678 1012 ntBASIC6.41□□□□□ -1.38
GFRA1P56159 TREML3P-201ENST00000457327 501 ntBASIC6.41□□□□□ -1.38
GFRA1P56159 NMNAT1P3-201ENST00000457517 888 ntBASIC6.41□□□□□ -1.38
GFRA1P56159 AC131233.1-201ENST00000479200 955 ntBASIC6.41□□□□□ -1.38
GFRA1P56159 RN7SL518P-201ENST00000491887 280 ntBASIC6.41□□□□□ -1.38
GFRA1P56159 RPL12P7-201ENST00000493832 494 ntBASIC6.41□□□□□ -1.38
GFRA1P56159 CFI-204ENST00000510800 667 ntTSL 2 BASIC6.41□□□□□ -1.38
GFRA1P56159 AC017007.1-201ENST00000511960 415 ntBASIC6.41□□□□□ -1.38
GFRA1P56159 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC6.41□□□□□ -1.38
GFRA1P56159 RPL12P22-201ENST00000519073 490 ntBASIC6.41□□□□□ -1.38
GFRA1P56159 IGHVIII-25-1-201ENST00000522143 241 ntBASIC6.41□□□□□ -1.38
GFRA1P56159 AC130366.1-201ENST00000526505 1192 ntBASIC6.41□□□□□ -1.38
GFRA1P56159 LINC02384-207ENST00000542875 551 ntTSL 4 BASIC6.41□□□□□ -1.38
GFRA1P56159 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC6.41□□□□□ -1.38
GFRA1P56159 AL391156.1-201ENST00000554965 554 ntBASIC6.41□□□□□ -1.38
GFRA1P56159 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC6.41□□□□□ -1.38
GFRA1P56159 AC044913.1-201ENST00000557200 430 ntBASIC6.41□□□□□ -1.38
GFRA1P56159 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC6.41□□□□□ -1.38
GFRA1P56159 MIR3912-201ENST00000577566 105 ntBASIC6.41□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 74.7 ms