Protein–RNA interactions for Protein: P49916

LIG3, DNA ligase 3, humanhuman

Predictions only

Length 1,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3P49916 AC011595.1-201ENST00000548901 753 ntTSL 3 BASIC7.37□□□□□ -1.23
LIG3P49916 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC7.37□□□□□ -1.23
LIG3P49916 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC7.37□□□□□ -1.23
LIG3P49916 AC002400.1-201ENST00000569310 726 ntBASIC7.37□□□□□ -1.23
LIG3P49916 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC7.37□□□□□ -1.23
LIG3P49916 CCL2-202ENST00000580907 736 ntTSL 2 BASIC7.37□□□□□ -1.23
LIG3P49916 AC090774.2-201ENST00000584708 322 ntBASIC7.37□□□□□ -1.23
LIG3P49916 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC7.37□□□□□ -1.23
LIG3P49916 AL031601.1-201ENST00000605702 394 ntBASIC7.37□□□□□ -1.23
LIG3P49916 IFNA5-201ENST00000610521 987 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
LIG3P49916 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
LIG3P49916 AL158062.1-201ENST00000619632 745 ntBASIC7.37□□□□□ -1.23
LIG3P49916 uc_338.37-201ENST00000620113 186 ntBASIC7.37□□□□□ -1.23
LIG3P49916 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC7.37□□□□□ -1.23
LIG3P49916 AL359715.5-201ENST00000623431 443 ntBASIC7.37□□□□□ -1.23
LIG3P49916 AC010608.2-201ENST00000624830 470 ntBASIC7.37□□□□□ -1.23
LIG3P49916 CASC22-202ENST00000628396 802 ntTSL 5 BASIC7.37□□□□□ -1.23
LIG3P49916 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
LIG3P49916 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC7.37□□□□□ -1.23
LIG3P49916 CYP51A1-204ENST00000450723 1729 ntTSL 2 BASIC7.37□□□□□ -1.23
LIG3P49916 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
LIG3P49916 MAPK10-261ENST00000641050 3109 ntBASIC7.37□□□□□ -1.23
LIG3P49916 LINC01087-201ENST00000431979 3516 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
LIG3P49916 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
LIG3P49916 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC7.37□□□□□ -1.23
LIG3P49916 CEP97-206ENST00000494050 2870 ntAPPRIS ALT2 TSL 2 BASIC7.37□□□□□ -1.23
LIG3P49916 IFNA13-202ENST00000610660 1539 ntAPPRIS P2 BASIC7.37□□□□□ -1.23
LIG3P49916 SERPINA11-201ENST00000334708 1476 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
LIG3P49916 AL391261.1-201ENST00000555712 1479 ntBASIC7.36□□□□□ -1.23
LIG3P49916 MTCO1P18-201ENST00000455518 1419 ntBASIC7.36□□□□□ -1.23
LIG3P49916 AC005702.3-201ENST00000585345 1447 ntBASIC7.36□□□□□ -1.23
LIG3P49916 TRIM53CP-201ENST00000531490 1354 ntBASIC7.36□□□□□ -1.23
LIG3P49916 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
LIG3P49916 PLCH1-206ENST00000494598 3525 ntTSL 5 BASIC7.36□□□□□ -1.23
LIG3P49916 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC7.36□□□□□ -1.23
LIG3P49916 ST7-203ENST00000393443 2360 ntTSL 2 BASIC7.36□□□□□ -1.23
LIG3P49916 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC7.36□□□□□ -1.23
LIG3P49916 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
LIG3P49916 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
LIG3P49916 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
LIG3P49916 RPL10P16-201ENST00000325000 645 ntBASIC7.36□□□□□ -1.23
LIG3P49916 FUNDC2P3-201ENST00000334716 533 ntBASIC7.36□□□□□ -1.23
LIG3P49916 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC7.36□□□□□ -1.23
LIG3P49916 RNA5SP512-201ENST00000364550 120 ntBASIC7.36□□□□□ -1.23
LIG3P49916 ECHDC1-202ENST00000368289 909 ntTSL 5 BASIC7.36□□□□□ -1.23
LIG3P49916 S100B-203ENST00000397648 839 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
LIG3P49916 FABP12P1-201ENST00000401911 322 ntBASIC7.36□□□□□ -1.23
LIG3P49916 LINC01687-203ENST00000420255 897 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
LIG3P49916 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC7.36□□□□□ -1.23
LIG3P49916 AL050344.1-201ENST00000424084 490 ntTSL 3 BASIC7.36□□□□□ -1.23
LIG3P49916 FDPSP6-201ENST00000425091 512 ntBASIC7.36□□□□□ -1.23
LIG3P49916 C1DP1-201ENST00000426049 402 ntBASIC7.36□□□□□ -1.23
LIG3P49916 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC7.36□□□□□ -1.23
LIG3P49916 AL731892.1-201ENST00000437364 1192 ntBASIC7.36□□□□□ -1.23
LIG3P49916 NPM1P33-201ENST00000438918 872 ntBASIC7.36□□□□□ -1.23
LIG3P49916 AC114755.4-201ENST00000439114 443 ntBASIC7.36□□□□□ -1.23
LIG3P49916 ZNF138-205ENST00000440155 1066 ntAPPRIS P3 TSL 2 BASIC7.36□□□□□ -1.23
LIG3P49916 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC7.36□□□□□ -1.23
LIG3P49916 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC7.36□□□□□ -1.23
LIG3P49916 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC7.36□□□□□ -1.23
LIG3P49916 AC009961.3-201ENST00000449832 765 ntBASIC7.36□□□□□ -1.23
LIG3P49916 OSTCP1-201ENST00000455507 450 ntBASIC7.36□□□□□ -1.23
LIG3P49916 SNORA35.1-201ENST00000458908 128 ntBASIC7.36□□□□□ -1.23
LIG3P49916 RN7SL251P-201ENST00000464175 297 ntBASIC7.36□□□□□ -1.23
LIG3P49916 RPS7P11-201ENST00000484240 586 ntBASIC7.36□□□□□ -1.23
LIG3P49916 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC7.36□□□□□ -1.23
LIG3P49916 PRELID3BP7-201ENST00000503606 469 ntBASIC7.36□□□□□ -1.23
LIG3P49916 MTND5P13-201ENST00000513046 1079 ntBASIC7.36□□□□□ -1.23
LIG3P49916 NDUFB4P12-201ENST00000513465 390 ntBASIC7.36□□□□□ -1.23
LIG3P49916 FABP5P12-201ENST00000515543 389 ntBASIC7.36□□□□□ -1.23
LIG3P49916 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
LIG3P49916 AC013701.1-201ENST00000522657 465 ntBASIC7.36□□□□□ -1.23
LIG3P49916 AC103855.4-201ENST00000533158 265 ntBASIC7.36□□□□□ -1.23
LIG3P49916 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC7.36□□□□□ -1.23
LIG3P49916 AC135628.1-201ENST00000568867 534 ntBASIC7.36□□□□□ -1.23
LIG3P49916 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC7.36□□□□□ -1.23
LIG3P49916 MED31-202ENST00000574128 619 ntTSL 3 BASIC7.36□□□□□ -1.23
LIG3P49916 DLGAP1-AS3-201ENST00000577649 1258 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
LIG3P49916 AC016839.1-201ENST00000578162 867 ntBASIC7.36□□□□□ -1.23
LIG3P49916 MIR1273F-201ENST00000580581 99 ntBASIC7.36□□□□□ -1.23
LIG3P49916 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC7.36□□□□□ -1.23
LIG3P49916 PPP4R1-AS1-201ENST00000582435 379 ntTSL 2 BASIC7.36□□□□□ -1.23
LIG3P49916 AC068254.1-201ENST00000584753 483 ntTSL 3 BASIC7.36□□□□□ -1.23
LIG3P49916 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC7.36□□□□□ -1.23
LIG3P49916 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC7.36□□□□□ -1.23
LIG3P49916 DUXAP11-201ENST00000603858 526 ntBASIC7.36□□□□□ -1.23
LIG3P49916 AC108861.1-201ENST00000611634 585 ntTSL 4 BASIC7.36□□□□□ -1.23
LIG3P49916 AL158163.2-201ENST00000619110 700 ntBASIC7.36□□□□□ -1.23
LIG3P49916 AL121985.2-201ENST00000621192 555 ntBASIC7.36□□□□□ -1.23
LIG3P49916 AC022743.1-201ENST00000624990 664 ntBASIC7.36□□□□□ -1.23
LIG3P49916 LINC00598-209ENST00000635966 1148 ntTSL 5 BASIC7.36□□□□□ -1.23
LIG3P49916 CASC19-232ENST00000641480 1244 ntBASIC7.36□□□□□ -1.23
LIG3P49916 CBWD6-203ENST00000456520 1608 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
LIG3P49916 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
LIG3P49916 C1orf27-202ENST00000367470 3754 ntTSL 5 BASIC7.36□□□□□ -1.23
LIG3P49916 MCTP2-201ENST00000357742 7555 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
LIG3P49916 ZFP62-207ENST00000512132 4010 ntTSL 2 BASIC7.36□□□□□ -1.23
LIG3P49916 C4orf26-201ENST00000311623 1874 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
LIG3P49916 API5P1-201ENST00000424316 1510 ntBASIC7.36□□□□□ -1.23
LIG3P49916 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC7.36□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms