Protein–RNA interactions for Protein: P49639

HOXA1, Homeobox protein Hox-A1, humanhuman

Predicted RBP Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1P49639 PAGE4-201ENST00000218068 499 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
HOXA1P49639 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
HOXA1P49639 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
HOXA1P49639 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
HOXA1P49639 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
HOXA1P49639 RNU11-6P-201ENST00000391127 133 ntBASIC5.2□□□□□ -1.58
HOXA1P49639 RNA5SP35-201ENST00000391257 129 ntBASIC5.2□□□□□ -1.58
HOXA1P49639 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC5.2□□□□□ -1.58
HOXA1P49639 CD200R1L-201ENST00000398214 1296 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
HOXA1P49639 ATP6V1E1-203ENST00000399798 994 ntTSL 2 BASIC5.2□□□□□ -1.58
HOXA1P49639 AL136100.1-201ENST00000407696 330 ntBASIC5.2□□□□□ -1.58
HOXA1P49639 OR2A2-201ENST00000408979 1051 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
HOXA1P49639 AC114402.2-201ENST00000432760 643 ntBASIC5.2□□□□□ -1.58
HOXA1P49639 AC074367.1-201ENST00000438685 1125 ntBASIC5.2□□□□□ -1.58
HOXA1P49639 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC5.2□□□□□ -1.58
HOXA1P49639 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC5.2□□□□□ -1.58
HOXA1P49639 PARD3-AS1-201ENST00000446211 302 ntTSL 2 BASIC5.2□□□□□ -1.58
HOXA1P49639 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
HOXA1P49639 AL445228.1-201ENST00000449525 333 ntTSL 3 BASIC5.2□□□□□ -1.58
HOXA1P49639 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC5.2□□□□□ -1.58
HOXA1P49639 AL445687.2-201ENST00000458156 728 ntBASIC5.2□□□□□ -1.58
HOXA1P49639 RPS16P9-201ENST00000477220 427 ntBASIC5.2□□□□□ -1.58
HOXA1P49639 AC104825.1-201ENST00000503186 685 ntTSL 3 BASIC5.2□□□□□ -1.58
HOXA1P49639 AC092903.2-201ENST00000510244 427 ntTSL 5 BASIC5.2□□□□□ -1.58
HOXA1P49639 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC5.2□□□□□ -1.58
HOXA1P49639 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC5.2□□□□□ -1.58
HOXA1P49639 LINC02482-202ENST00000515205 422 ntTSL 2 BASIC5.2□□□□□ -1.58
HOXA1P49639 TBCA-209ENST00000522370 435 ntTSL 3 BASIC5.2□□□□□ -1.58
HOXA1P49639 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC5.2□□□□□ -1.58
HOXA1P49639 AP002336.1-201ENST00000531426 422 ntTSL 2 BASIC5.2□□□□□ -1.58
HOXA1P49639 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
HOXA1P49639 AC073896.2-202ENST00000549860 437 ntTSL 2 BASIC5.2□□□□□ -1.58
HOXA1P49639 RN7SL208P-201ENST00000577964 296 ntBASIC5.2□□□□□ -1.58
HOXA1P49639 PPIAL4C-201ENST00000585245 600 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
HOXA1P49639 AC005776.1-201ENST00000603164 290 ntBASIC5.2□□□□□ -1.58
HOXA1P49639 AL512413.1-201ENST00000606489 382 ntBASIC5.2□□□□□ -1.58
HOXA1P49639 AC093635.1-201ENST00000609028 555 ntBASIC5.2□□□□□ -1.58
HOXA1P49639 AC243829.2-201ENST00000617914 470 ntTSL 3 BASIC5.2□□□□□ -1.58
HOXA1P49639 AC026367.3-201ENST00000619032 590 ntBASIC5.2□□□□□ -1.58
HOXA1P49639 ALKAL2-208ENST00000619265 496 ntTSL 2 BASIC5.2□□□□□ -1.58
HOXA1P49639 AP006248.3-201ENST00000623580 594 ntBASIC5.2□□□□□ -1.58
HOXA1P49639 OR10R2-202ENST00000641067 1132 ntAPPRIS ALT2 BASIC5.2□□□□□ -1.58
HOXA1P49639 OR10R2-203ENST00000641400 975 ntAPPRIS ALT2 BASIC5.2□□□□□ -1.58
HOXA1P49639 AC026523.2-201ENST00000625039 7739 ntBASIC5.2□□□□□ -1.58
HOXA1P49639 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.2□□□□□ -1.58
HOXA1P49639 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
HOXA1P49639 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
HOXA1P49639 AL356479.1-203ENST00000411798 1440 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
HOXA1P49639 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
HOXA1P49639 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
HOXA1P49639 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
HOXA1P49639 SOCS5P3-201ENST00000425115 1576 ntBASIC5.2□□□□□ -1.58
HOXA1P49639 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
HOXA1P49639 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
HOXA1P49639 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
HOXA1P49639 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
HOXA1P49639 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC5.19□□□□□ -1.58
HOXA1P49639 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC5.19□□□□□ -1.58
HOXA1P49639 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
HOXA1P49639 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
HOXA1P49639 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
HOXA1P49639 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
HOXA1P49639 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
HOXA1P49639 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
HOXA1P49639 SAMMSON-213ENST00000641336 1521 ntBASIC5.19□□□□□ -1.58
HOXA1P49639 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
HOXA1P49639 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
HOXA1P49639 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC5.19□□□□□ -1.58
HOXA1P49639 LINC01931-201ENST00000295052 1832 ntTSL 2 BASIC5.19□□□□□ -1.58
HOXA1P49639 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
HOXA1P49639 CCL2-201ENST00000225831 741 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
HOXA1P49639 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
HOXA1P49639 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
HOXA1P49639 RNA5SP321-201ENST00000362722 111 ntBASIC5.19□□□□□ -1.58
HOXA1P49639 MIR99A-201ENST00000384906 81 ntBASIC5.19□□□□□ -1.58
HOXA1P49639 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
HOXA1P49639 RPLP1P10-201ENST00000413972 339 ntBASIC5.19□□□□□ -1.58
HOXA1P49639 UBE2V1P14-201ENST00000415815 558 ntBASIC5.19□□□□□ -1.58
HOXA1P49639 AC073115.2-201ENST00000416708 555 ntTSL 4 BASIC5.19□□□□□ -1.58
HOXA1P49639 GNRHR-202ENST00000420975 859 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
HOXA1P49639 CYCSP52-201ENST00000422857 310 ntBASIC5.19□□□□□ -1.58
HOXA1P49639 AC000089.1-201ENST00000424559 801 ntBASIC5.19□□□□□ -1.58
HOXA1P49639 AL445528.1-201ENST00000426330 420 ntBASIC5.19□□□□□ -1.58
HOXA1P49639 AC104076.1-201ENST00000428080 265 ntTSL 3 BASIC5.19□□□□□ -1.58
HOXA1P49639 AL136231.1-201ENST00000429407 730 ntBASIC5.19□□□□□ -1.58
HOXA1P49639 AL138733.2-201ENST00000431947 804 ntTSL 5 BASIC5.19□□□□□ -1.58
HOXA1P49639 GTF3AP6-201ENST00000432585 986 ntBASIC5.19□□□□□ -1.58
HOXA1P49639 NPM1P18-201ENST00000434232 732 ntBASIC5.19□□□□□ -1.58
HOXA1P49639 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC5.19□□□□□ -1.58
HOXA1P49639 AL161793.1-201ENST00000435021 445 ntTSL 3 BASIC5.19□□□□□ -1.58
HOXA1P49639 AP001048.1-201ENST00000436359 280 ntTSL 2 BASIC5.19□□□□□ -1.58
HOXA1P49639 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
HOXA1P49639 AC009237.1-201ENST00000442127 744 ntBASIC5.19□□□□□ -1.58
HOXA1P49639 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC5.19□□□□□ -1.58
HOXA1P49639 ZNF736P6Y-201ENST00000447526 1213 ntBASIC5.19□□□□□ -1.58
HOXA1P49639 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
HOXA1P49639 SEPT7P3-201ENST00000455017 621 ntBASIC5.19□□□□□ -1.58
HOXA1P49639 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC5.19□□□□□ -1.58
HOXA1P49639 RN7SL868P-201ENST00000485915 303 ntBASIC5.19□□□□□ -1.58
HOXA1P49639 SMR3B-202ENST00000504825 489 ntAPPRIS P1 TSL 3 BASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms