Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC5.26□□□□□ -1.57
CX3CR1P49238 TINAG-203ENST00000370869 782 ntTSL 3 BASIC5.26□□□□□ -1.57
CX3CR1P49238 MIR188-201ENST00000385034 86 ntBASIC5.26□□□□□ -1.57
CX3CR1P49238 MYL6P5-201ENST00000412707 459 ntBASIC5.26□□□□□ -1.57
CX3CR1P49238 RPL35AP31-201ENST00000418340 337 ntBASIC5.26□□□□□ -1.57
CX3CR1P49238 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC5.26□□□□□ -1.57
CX3CR1P49238 RPL12P12-201ENST00000424633 501 ntBASIC5.26□□□□□ -1.57
CX3CR1P49238 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC5.26□□□□□ -1.57
CX3CR1P49238 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC5.26□□□□□ -1.57
CX3CR1P49238 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC5.26□□□□□ -1.57
CX3CR1P49238 AC097359.1-201ENST00000447946 463 ntBASIC5.26□□□□□ -1.57
CX3CR1P49238 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CX3CR1P49238 OR52I1-201ENST00000450052 1050 ntBASIC5.26□□□□□ -1.57
CX3CR1P49238 AC002553.3-201ENST00000453002 341 ntBASIC5.26□□□□□ -1.57
CX3CR1P49238 OR7E22P-201ENST00000478335 1035 ntBASIC5.26□□□□□ -1.57
CX3CR1P49238 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC5.26□□□□□ -1.57
CX3CR1P49238 AC005017.1-201ENST00000482002 490 ntBASIC5.26□□□□□ -1.57
CX3CR1P49238 AP002453.1-201ENST00000492327 668 ntBASIC5.26□□□□□ -1.57
CX3CR1P49238 AC138409.2-202ENST00000507274 458 ntBASIC5.26□□□□□ -1.57
CX3CR1P49238 NACAP5-201ENST00000509863 636 ntBASIC5.26□□□□□ -1.57
CX3CR1P49238 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC5.26□□□□□ -1.57
CX3CR1P49238 LDHC-203ENST00000535809 757 ntTSL 5 BASIC5.26□□□□□ -1.57
CX3CR1P49238 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC5.26□□□□□ -1.57
CX3CR1P49238 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC5.26□□□□□ -1.57
CX3CR1P49238 HMGN2P47-201ENST00000559378 272 ntBASIC5.26□□□□□ -1.57
CX3CR1P49238 MT1CP-201ENST00000567054 174 ntBASIC5.26□□□□□ -1.57
CX3CR1P49238 AC119403.2-201ENST00000590960 598 ntBASIC5.26□□□□□ -1.57
CX3CR1P49238 WBP1LP12-201ENST00000604449 331 ntBASIC5.26□□□□□ -1.57
CX3CR1P49238 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC5.26□□□□□ -1.57
CX3CR1P49238 AC022021.1-201ENST00000634334 843 ntTSL 5 BASIC5.26□□□□□ -1.57
CX3CR1P49238 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CX3CR1P49238 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
CX3CR1P49238 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
CX3CR1P49238 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CX3CR1P49238 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.26□□□□□ -1.57
CX3CR1P49238 CASC19-255ENST00000641733 1385 ntBASIC5.26□□□□□ -1.57
CX3CR1P49238 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
CX3CR1P49238 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC5.26□□□□□ -1.57
CX3CR1P49238 AC119674.1-202ENST00000641333 1860 ntBASIC5.26□□□□□ -1.57
CX3CR1P49238 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.26□□□□□ -1.57
CX3CR1P49238 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC5.26□□□□□ -1.57
CX3CR1P49238 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC5.26□□□□□ -1.57
CX3CR1P49238 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CX3CR1P49238 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CX3CR1P49238 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.25□□□□□ -1.57
CX3CR1P49238 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC5.25□□□□□ -1.57
CX3CR1P49238 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC5.25□□□□□ -1.57
CX3CR1P49238 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CX3CR1P49238 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.25□□□□□ -1.57
CX3CR1P49238 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CX3CR1P49238 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CX3CR1P49238 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CX3CR1P49238 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CX3CR1P49238 ING3-204ENST00000431467 1447 ntTSL 2 BASIC5.25□□□□□ -1.57
CX3CR1P49238 AL359955.1-201ENST00000455242 3275 ntBASIC5.25□□□□□ -1.57
CX3CR1P49238 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
CX3CR1P49238 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
CX3CR1P49238 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC5.25□□□□□ -1.57
CX3CR1P49238 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CX3CR1P49238 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CX3CR1P49238 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC5.25□□□□□ -1.57
CX3CR1P49238 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC5.25□□□□□ -1.57
CX3CR1P49238 PAGE2B-201ENST00000374971 493 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CX3CR1P49238 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
CX3CR1P49238 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
CX3CR1P49238 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
CX3CR1P49238 NMD3P2-201ENST00000421815 761 ntBASIC5.25□□□□□ -1.57
CX3CR1P49238 RPL7AP51-201ENST00000422016 760 ntBASIC5.25□□□□□ -1.57
CX3CR1P49238 LINC01370-202ENST00000445606 731 ntTSL 5 BASIC5.25□□□□□ -1.57
CX3CR1P49238 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CX3CR1P49238 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC5.25□□□□□ -1.57
CX3CR1P49238 HBBP1-202ENST00000454892 455 ntTSL 2 BASIC5.25□□□□□ -1.57
CX3CR1P49238 CEACAMP11-201ENST00000455211 583 ntBASIC5.25□□□□□ -1.57
CX3CR1P49238 AC083795.1-201ENST00000491760 320 ntBASIC5.25□□□□□ -1.57
CX3CR1P49238 RPS27P20-201ENST00000492051 246 ntBASIC5.25□□□□□ -1.57
CX3CR1P49238 RN7SL284P-201ENST00000498823 275 ntBASIC5.25□□□□□ -1.57
CX3CR1P49238 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CX3CR1P49238 AC036111.2-201ENST00000533247 901 ntBASIC5.25□□□□□ -1.57
CX3CR1P49238 AL359232.1-202ENST00000556874 1206 ntTSL 2 BASIC5.25□□□□□ -1.57
CX3CR1P49238 AL157871.4-201ENST00000557226 385 ntTSL 2 BASIC5.25□□□□□ -1.57
CX3CR1P49238 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC5.25□□□□□ -1.57
CX3CR1P49238 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC5.25□□□□□ -1.57
CX3CR1P49238 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC5.25□□□□□ -1.57
CX3CR1P49238 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC5.25□□□□□ -1.57
CX3CR1P49238 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC5.25□□□□□ -1.57
CX3CR1P49238 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC5.25□□□□□ -1.57
CX3CR1P49238 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CX3CR1P49238 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC5.25□□□□□ -1.57
CX3CR1P49238 AL645933.2-201ENST00000606743 1207 ntBASIC5.25□□□□□ -1.57
CX3CR1P49238 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC5.25□□□□□ -1.57
CX3CR1P49238 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.25□□□□□ -1.57
CX3CR1P49238 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CX3CR1P49238 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CX3CR1P49238 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC5.25□□□□□ -1.57
CX3CR1P49238 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CX3CR1P49238 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
CX3CR1P49238 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CX3CR1P49238 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CX3CR1P49238 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
CX3CR1P49238 AC140479.2-201ENST00000421567 3130 ntBASIC5.25□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 69.7 ms