Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SLC1A1P43005 TINAG-203ENST00000370869 782 ntTSL 3 BASIC6.19□□□□□ -1.42
SLC1A1P43005 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
SLC1A1P43005 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SLC1A1P43005 AL034417.1-201ENST00000399343 800 ntBASIC6.19□□□□□ -1.42
SLC1A1P43005 SNRPEP6-201ENST00000407465 277 ntBASIC6.19□□□□□ -1.42
SLC1A1P43005 MIR4435-2HG-203ENST00000409569 514 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
SLC1A1P43005 AC105275.1-201ENST00000417794 491 ntTSL 3 BASIC6.19□□□□□ -1.42
SLC1A1P43005 RPS4XP5-201ENST00000419038 768 ntBASIC6.19□□□□□ -1.42
SLC1A1P43005 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC6.19□□□□□ -1.42
SLC1A1P43005 LINC01728-201ENST00000428529 524 ntTSL 2 BASIC6.19□□□□□ -1.42
SLC1A1P43005 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC6.19□□□□□ -1.42
SLC1A1P43005 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC6.19□□□□□ -1.42
SLC1A1P43005 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC6.19□□□□□ -1.42
SLC1A1P43005 RN7SL254P-201ENST00000460609 284 ntBASIC6.19□□□□□ -1.42
SLC1A1P43005 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC6.19□□□□□ -1.42
SLC1A1P43005 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC6.19□□□□□ -1.42
SLC1A1P43005 MAST4-IT1-201ENST00000514241 658 ntBASIC6.19□□□□□ -1.42
SLC1A1P43005 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC6.19□□□□□ -1.42
SLC1A1P43005 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC6.19□□□□□ -1.42
SLC1A1P43005 MALAT1-203ENST00000544868 480 ntTSL 3 BASIC6.19□□□□□ -1.42
SLC1A1P43005 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC6.19□□□□□ -1.42
SLC1A1P43005 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC6.19□□□□□ -1.42
SLC1A1P43005 NANOGP3-201ENST00000605855 286 ntBASIC6.19□□□□□ -1.42
SLC1A1P43005 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC6.19□□□□□ -1.42
SLC1A1P43005 MALAT1-217ENST00000620902 352 ntTSL 3 BASIC6.19□□□□□ -1.42
SLC1A1P43005 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC6.19□□□□□ -1.42
SLC1A1P43005 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC6.19□□□□□ -1.42
SLC1A1P43005 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC6.19□□□□□ -1.42
SLC1A1P43005 AL357140.4-201ENST00000636827 412 ntBASIC6.19□□□□□ -1.42
SLC1A1P43005 ATM-229ENST00000639953 587 ntTSL 5 BASIC6.19□□□□□ -1.42
SLC1A1P43005 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SLC1A1P43005 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC6.19□□□□□ -1.42
SLC1A1P43005 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
SLC1A1P43005 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
SLC1A1P43005 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
SLC1A1P43005 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC6.19□□□□□ -1.42
SLC1A1P43005 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
SLC1A1P43005 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC6.19□□□□□ -1.42
SLC1A1P43005 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
SLC1A1P43005 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC6.18□□□□□ -1.42
SLC1A1P43005 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SLC1A1P43005 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
SLC1A1P43005 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SLC1A1P43005 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SLC1A1P43005 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
SLC1A1P43005 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
SLC1A1P43005 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
SLC1A1P43005 NAT1-210ENST00000545197 1827 ntTSL 5 BASIC6.18□□□□□ -1.42
SLC1A1P43005 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC6.18□□□□□ -1.42
SLC1A1P43005 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC6.18□□□□□ -1.42
SLC1A1P43005 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SLC1A1P43005 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SLC1A1P43005 GNAT3-201ENST00000398291 1159 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
SLC1A1P43005 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
SLC1A1P43005 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC6.18□□□□□ -1.42
SLC1A1P43005 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC6.18□□□□□ -1.42
SLC1A1P43005 AC024601.1-201ENST00000427247 524 ntTSL 3 BASIC6.18□□□□□ -1.42
SLC1A1P43005 RPSAP65-201ENST00000429660 595 ntBASIC6.18□□□□□ -1.42
SLC1A1P43005 FTO-202ENST00000431610 707 ntTSL 3 BASIC6.18□□□□□ -1.42
SLC1A1P43005 AC023141.3-201ENST00000436698 278 ntBASIC6.18□□□□□ -1.42
SLC1A1P43005 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC6.18□□□□□ -1.42
SLC1A1P43005 RPS12P17-201ENST00000438591 377 ntBASIC6.18□□□□□ -1.42
SLC1A1P43005 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC6.18□□□□□ -1.42
SLC1A1P43005 RNU1-88P-201ENST00000459274 128 ntBASIC6.18□□□□□ -1.42
SLC1A1P43005 AC078785.2-201ENST00000462010 1253 ntTSL 3 BASIC6.18□□□□□ -1.42
SLC1A1P43005 AC006539.1-201ENST00000481419 501 ntBASIC6.18□□□□□ -1.42
SLC1A1P43005 OR7E99P-201ENST00000505750 922 ntBASIC6.18□□□□□ -1.42
SLC1A1P43005 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC6.18□□□□□ -1.42
SLC1A1P43005 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC6.18□□□□□ -1.42
SLC1A1P43005 AP001000.1-201ENST00000526843 742 ntBASIC6.18□□□□□ -1.42
SLC1A1P43005 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SLC1A1P43005 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC6.18□□□□□ -1.42
SLC1A1P43005 AC011601.1-201ENST00000549710 577 ntTSL 3 BASIC6.18□□□□□ -1.42
SLC1A1P43005 LINC00640-204ENST00000557295 708 ntTSL 5 BASIC6.18□□□□□ -1.42
SLC1A1P43005 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC6.18□□□□□ -1.42
SLC1A1P43005 AC004232.2-201ENST00000574245 821 ntBASIC6.18□□□□□ -1.42
SLC1A1P43005 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC6.18□□□□□ -1.42
SLC1A1P43005 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC6.18□□□□□ -1.42
SLC1A1P43005 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC6.18□□□□□ -1.42
SLC1A1P43005 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SLC1A1P43005 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC6.18□□□□□ -1.42
SLC1A1P43005 AC145423.1-201ENST00000605712 336 ntBASIC6.18□□□□□ -1.42
SLC1A1P43005 AC015819.1-201ENST00000613588 663 ntBASIC6.18□□□□□ -1.42
SLC1A1P43005 AL109924.4-201ENST00000623089 670 ntBASIC6.18□□□□□ -1.42
SLC1A1P43005 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC6.18□□□□□ -1.42
SLC1A1P43005 AC073488.6-201ENST00000632293 754 ntBASIC6.18□□□□□ -1.42
SLC1A1P43005 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
SLC1A1P43005 PYROXD1-205ENST00000538582 3639 ntTSL 2 BASIC6.18□□□□□ -1.42
SLC1A1P43005 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SLC1A1P43005 AC239868.2-201ENST00000564237 4527 ntBASIC6.18□□□□□ -1.42
SLC1A1P43005 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SLC1A1P43005 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
SLC1A1P43005 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC6.18□□□□□ -1.42
SLC1A1P43005 NLRP3P1-201ENST00000622303 1785 ntBASIC6.18□□□□□ -1.42
SLC1A1P43005 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
SLC1A1P43005 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
SLC1A1P43005 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC6.18□□□□□ -1.42
SLC1A1P43005 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SLC1A1P43005 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 118.8 ms