Protein–RNA interactions for Protein: P37268

FDFT1, Squalene synthase, humanhuman

Predictions only

Length 417 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1P37268 RN7SL254P-201ENST00000460609 284 ntBASIC6.06□□□□□ -1.44
FDFT1P37268 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC6.06□□□□□ -1.44
FDFT1P37268 LINC02374-201ENST00000503637 743 ntTSL 3 BASIC6.06□□□□□ -1.44
FDFT1P37268 AC113367.2-201ENST00000505749 160 ntBASIC6.06□□□□□ -1.44
FDFT1P37268 ST13P12-201ENST00000508958 1094 ntBASIC6.06□□□□□ -1.44
FDFT1P37268 TPT1-AS1-209ENST00000520585 818 ntTSL 5 BASIC6.06□□□□□ -1.44
FDFT1P37268 AC078899.1-201ENST00000521432 1185 ntBASIC6.06□□□□□ -1.44
FDFT1P37268 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC6.06□□□□□ -1.44
FDFT1P37268 FAU-203ENST00000525297 355 ntTSL 5 BASIC6.06□□□□□ -1.44
FDFT1P37268 AP000620.1-201ENST00000527147 504 ntBASIC6.06□□□□□ -1.44
FDFT1P37268 AC090424.1-201ENST00000535243 736 ntBASIC6.06□□□□□ -1.44
FDFT1P37268 LDHC-203ENST00000535809 757 ntTSL 5 BASIC6.06□□□□□ -1.44
FDFT1P37268 AL121594.2-201ENST00000541658 472 ntBASIC6.06□□□□□ -1.44
FDFT1P37268 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC6.06□□□□□ -1.44
FDFT1P37268 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC6.06□□□□□ -1.44
FDFT1P37268 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC6.06□□□□□ -1.44
FDFT1P37268 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC6.06□□□□□ -1.44
FDFT1P37268 AC004232.2-201ENST00000574245 821 ntBASIC6.06□□□□□ -1.44
FDFT1P37268 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC6.06□□□□□ -1.44
FDFT1P37268 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC6.06□□□□□ -1.44
FDFT1P37268 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC6.06□□□□□ -1.44
FDFT1P37268 AC025857.2-201ENST00000602711 238 ntBASIC6.06□□□□□ -1.44
FDFT1P37268 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC6.06□□□□□ -1.44
FDFT1P37268 FAM27E2-201ENST00000619668 403 ntBASIC6.06□□□□□ -1.44
FDFT1P37268 5S_rRNA.29-201ENST00000641250 107 ntBASIC6.06□□□□□ -1.44
FDFT1P37268 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC6.06□□□□□ -1.44
FDFT1P37268 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
FDFT1P37268 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
FDFT1P37268 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
FDFT1P37268 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
FDFT1P37268 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC6.06□□□□□ -1.44
FDFT1P37268 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC6.06□□□□□ -1.44
FDFT1P37268 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
FDFT1P37268 AC137056.2-201ENST00000624055 1958 ntBASIC6.06□□□□□ -1.44
FDFT1P37268 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
FDFT1P37268 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC6.06□□□□□ -1.44
FDFT1P37268 SAMM50P1-201ENST00000455403 1399 ntBASIC6.06□□□□□ -1.44
FDFT1P37268 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
FDFT1P37268 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
FDFT1P37268 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
FDFT1P37268 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC6.05□□□□□ -1.44
FDFT1P37268 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC6.05□□□□□ -1.44
FDFT1P37268 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC6.05□□□□□ -1.44
FDFT1P37268 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC6.05□□□□□ -1.44
FDFT1P37268 C3orf14-201ENST00000232519 690 ntAPPRIS P1 TSL 3 BASIC6.05□□□□□ -1.44
FDFT1P37268 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC6.05□□□□□ -1.44
FDFT1P37268 MRPS21P2-201ENST00000424704 264 ntBASIC6.05□□□□□ -1.44
FDFT1P37268 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC6.05□□□□□ -1.44
FDFT1P37268 RPL5P2-201ENST00000429598 854 ntBASIC6.05□□□□□ -1.44
FDFT1P37268 RPSAP32-201ENST00000432681 526 ntBASIC6.05□□□□□ -1.44
FDFT1P37268 AC096775.1-201ENST00000437724 448 ntBASIC6.05□□□□□ -1.44
FDFT1P37268 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC6.05□□□□□ -1.44
FDFT1P37268 AC023245.1-201ENST00000468501 517 ntBASIC6.05□□□□□ -1.44
FDFT1P37268 AC092865.4-201ENST00000477936 615 ntBASIC6.05□□□□□ -1.44
FDFT1P37268 RPL29P23-201ENST00000486188 442 ntBASIC6.05□□□□□ -1.44
FDFT1P37268 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC6.05□□□□□ -1.44
FDFT1P37268 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC6.05□□□□□ -1.44
FDFT1P37268 LDHBP3-201ENST00000514909 822 ntBASIC6.05□□□□□ -1.44
FDFT1P37268 RNA5SP441-201ENST00000516809 88 ntBASIC6.05□□□□□ -1.44
FDFT1P37268 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC6.05□□□□□ -1.44
FDFT1P37268 GTF2IP11-201ENST00000526931 420 ntBASIC6.05□□□□□ -1.44
FDFT1P37268 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
FDFT1P37268 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC6.05□□□□□ -1.44
FDFT1P37268 AC007346.1-201ENST00000569208 867 ntBASIC6.05□□□□□ -1.44
FDFT1P37268 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC6.05□□□□□ -1.44
FDFT1P37268 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC6.05□□□□□ -1.44
FDFT1P37268 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC6.05□□□□□ -1.44
FDFT1P37268 AC073488.3-201ENST00000631611 778 ntBASIC6.05□□□□□ -1.44
FDFT1P37268 AC073488.6-201ENST00000632293 754 ntBASIC6.05□□□□□ -1.44
FDFT1P37268 AL357140.4-201ENST00000636827 412 ntBASIC6.05□□□□□ -1.44
FDFT1P37268 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC6.05□□□□□ -1.44
FDFT1P37268 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC6.05□□□□□ -1.44
FDFT1P37268 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC6.05□□□□□ -1.44
FDFT1P37268 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC6.05□□□□□ -1.44
FDFT1P37268 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
FDFT1P37268 RBPJP7-201ENST00000442803 1447 ntBASIC6.05□□□□□ -1.44
FDFT1P37268 RBPJP5-201ENST00000449433 1447 ntBASIC6.05□□□□□ -1.44
FDFT1P37268 AL158152.1-201ENST00000602652 1435 ntBASIC6.05□□□□□ -1.44
FDFT1P37268 AL078595.2-201ENST00000605309 1780 ntBASIC6.05□□□□□ -1.44
FDFT1P37268 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC6.05□□□□□ -1.44
FDFT1P37268 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
FDFT1P37268 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
FDFT1P37268 AC239868.2-201ENST00000564237 4527 ntBASIC6.04□□□□□ -1.44
FDFT1P37268 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC6.04□□□□□ -1.44
FDFT1P37268 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
FDFT1P37268 DYNC2LI1-210ENST00000605786 1346 ntAPPRIS ALT1 TSL 1 (best) BASIC6.04□□□□□ -1.44
FDFT1P37268 AC092451.3-201ENST00000625067 1343 ntBASIC6.04□□□□□ -1.44
FDFT1P37268 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC6.04□□□□□ -1.44
FDFT1P37268 C2CD6-201ENST00000286195 2104 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
FDFT1P37268 AC012254.3-201ENST00000591183 2117 ntBASIC6.04□□□□□ -1.44
FDFT1P37268 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
FDFT1P37268 AL355488.2-201ENST00000609909 2850 ntBASIC6.04□□□□□ -1.44
FDFT1P37268 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
FDFT1P37268 YWHAZP6-201ENST00000399764 738 ntBASIC6.04□□□□□ -1.44
FDFT1P37268 SNRPEP6-201ENST00000407465 277 ntBASIC6.04□□□□□ -1.44
FDFT1P37268 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC6.04□□□□□ -1.44
FDFT1P37268 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC6.04□□□□□ -1.44
FDFT1P37268 AL133268.4-201ENST00000424868 472 ntTSL 3 BASIC6.04□□□□□ -1.44
FDFT1P37268 AC024601.1-201ENST00000427247 524 ntTSL 3 BASIC6.04□□□□□ -1.44
FDFT1P37268 AC108479.1-201ENST00000431142 427 ntBASIC6.04□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 119.6 ms