Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 AP000431.1-201ENST00000424219 469 ntTSL 3 BASIC6.52□□□□□ -1.37
HOXC12P31275 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC6.52□□□□□ -1.37
HOXC12P31275 ELOCP8-201ENST00000439309 332 ntBASIC6.52□□□□□ -1.37
HOXC12P31275 AC007365.1-201ENST00000439964 627 ntTSL 2 BASIC6.52□□□□□ -1.37
HOXC12P31275 ELOCP15-201ENST00000442090 332 ntBASIC6.52□□□□□ -1.37
HOXC12P31275 AL356133.1-201ENST00000444762 372 ntBASIC6.52□□□□□ -1.37
HOXC12P31275 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC6.52□□□□□ -1.37
HOXC12P31275 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC6.52□□□□□ -1.37
HOXC12P31275 MTND2P19-201ENST00000449129 1012 ntBASIC6.52□□□□□ -1.37
HOXC12P31275 CDC42P1-201ENST00000456658 548 ntBASIC6.52□□□□□ -1.37
HOXC12P31275 RPLP0P1-201ENST00000457002 361 ntBASIC6.52□□□□□ -1.37
HOXC12P31275 AL391863.1-202ENST00000457427 612 ntTSL 5 BASIC6.52□□□□□ -1.37
HOXC12P31275 RN7SL741P-201ENST00000482473 289 ntBASIC6.52□□□□□ -1.37
HOXC12P31275 ANK3-213ENST00000486349 493 ntTSL 2 BASIC6.52□□□□□ -1.37
HOXC12P31275 RPL21P42-201ENST00000488408 464 ntBASIC6.52□□□□□ -1.37
HOXC12P31275 AC010655.2-201ENST00000493710 662 ntTSL 3 BASIC6.52□□□□□ -1.37
HOXC12P31275 PRELID3BP4-201ENST00000515476 571 ntBASIC6.52□□□□□ -1.37
HOXC12P31275 FBXO16-208ENST00000519471 398 ntTSL 2 BASIC6.52□□□□□ -1.37
HOXC12P31275 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC6.52□□□□□ -1.37
HOXC12P31275 IGKV2-29-201ENST00000521304 372 ntBASIC6.52□□□□□ -1.37
HOXC12P31275 RFPL1S-203ENST00000539579 330 ntBASIC6.52□□□□□ -1.37
HOXC12P31275 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC6.52□□□□□ -1.37
HOXC12P31275 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC6.52□□□□□ -1.37
HOXC12P31275 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC6.52□□□□□ -1.37
HOXC12P31275 CASC16-202ENST00000563844 610 ntTSL 3 BASIC6.52□□□□□ -1.37
HOXC12P31275 IGHV1OR15-3-201ENST00000564926 351 ntBASIC6.52□□□□□ -1.37
HOXC12P31275 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC6.52□□□□□ -1.37
HOXC12P31275 AC002400.1-201ENST00000569310 726 ntBASIC6.52□□□□□ -1.37
HOXC12P31275 AC010531.4-201ENST00000570286 576 ntTSL 4 BASIC6.52□□□□□ -1.37
HOXC12P31275 MIR5708-201ENST00000579723 85 ntBASIC6.52□□□□□ -1.37
HOXC12P31275 RN7SL835P-201ENST00000579920 262 ntBASIC6.52□□□□□ -1.37
HOXC12P31275 AC090616.2-202ENST00000584248 222 ntBASIC6.52□□□□□ -1.37
HOXC12P31275 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC6.52□□□□□ -1.37
HOXC12P31275 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC6.52□□□□□ -1.37
HOXC12P31275 ARF4-AS1-203ENST00000607782 552 ntTSL 3 BASIC6.52□□□□□ -1.37
HOXC12P31275 AC107075.1-201ENST00000613695 314 ntBASIC6.52□□□□□ -1.37
HOXC12P31275 AC090246.1-201ENST00000616499 426 ntBASIC6.52□□□□□ -1.37
HOXC12P31275 AC025262.3-201ENST00000623666 360 ntBASIC6.52□□□□□ -1.37
HOXC12P31275 CYB5B-201ENST00000307892 4286 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
HOXC12P31275 SLC24A1-212ENST00000546330 3246 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
HOXC12P31275 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
HOXC12P31275 EEF1A1P33-201ENST00000554413 1362 ntBASIC6.52□□□□□ -1.37
HOXC12P31275 EEF1A1P22-201ENST00000559385 1380 ntBASIC6.52□□□□□ -1.37
HOXC12P31275 OR4Q3-202ENST00000642117 2165 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
HOXC12P31275 LINC01441-201ENST00000433766 2290 ntTSL 2 BASIC6.52□□□□□ -1.37
HOXC12P31275 AL121835.2-201ENST00000624253 3502 ntBASIC6.52□□□□□ -1.37
HOXC12P31275 UBXN8-201ENST00000265616 1450 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
HOXC12P31275 NCKAP5-203ENST00000405974 3636 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
HOXC12P31275 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
HOXC12P31275 MUC5AC-201ENST00000621226 17448 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
HOXC12P31275 AOAH-210ENST00000617267 2398 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
HOXC12P31275 KCNK2-203ENST00000444842 3379 ntAPPRIS ALT1 TSL 1 (best) BASIC6.52□□□□□ -1.37
HOXC12P31275 FRMD7-203ENST00000464296 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
HOXC12P31275 AADACL3-201ENST00000359318 3662 ntAPPRIS P1 TSL 3 BASIC6.52□□□□□ -1.37
HOXC12P31275 MED21-201ENST00000282892 1753 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
HOXC12P31275 C5orf24-201ENST00000338051 4270 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
HOXC12P31275 RBPJP6-201ENST00000411556 1431 ntBASIC6.51□□□□□ -1.37
HOXC12P31275 CDHR3-201ENST00000317716 3813 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
HOXC12P31275 CEP85-201ENST00000252992 3935 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
HOXC12P31275 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC6.51□□□□□ -1.37
HOXC12P31275 EXOC6-201ENST00000260762 3564 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
HOXC12P31275 NIN-204ENST00000382043 4216 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
HOXC12P31275 FAM13A-AS1-202ENST00000511543 2453 ntTSL 2 BASIC6.51□□□□□ -1.37
HOXC12P31275 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
HOXC12P31275 RBMX2P2-201ENST00000257020 946 ntBASIC6.51□□□□□ -1.37
HOXC12P31275 RNA5SP429-201ENST00000363688 109 ntBASIC6.51□□□□□ -1.37
HOXC12P31275 RNA5SP396-201ENST00000364834 120 ntBASIC6.51□□□□□ -1.37
HOXC12P31275 RNU6-304P-201ENST00000364855 107 ntBASIC6.51□□□□□ -1.37
HOXC12P31275 RNA5SP238-201ENST00000365464 120 ntBASIC6.51□□□□□ -1.37
HOXC12P31275 RNU1-122P-201ENST00000365538 156 ntBASIC6.51□□□□□ -1.37
HOXC12P31275 RNU6-244P-201ENST00000391028 104 ntBASIC6.51□□□□□ -1.37
HOXC12P31275 RNU6-192P-201ENST00000391253 100 ntBASIC6.51□□□□□ -1.37
HOXC12P31275 AC008171.1-201ENST00000395058 200 ntBASIC6.51□□□□□ -1.37
HOXC12P31275 AL035419.1-201ENST00000397037 564 ntBASIC6.51□□□□□ -1.37
HOXC12P31275 GRIK1-AS1-202ENST00000412579 818 ntTSL 5 BASIC6.51□□□□□ -1.37
HOXC12P31275 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC6.51□□□□□ -1.37
HOXC12P31275 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC6.51□□□□□ -1.37
HOXC12P31275 AC106900.1-201ENST00000418620 456 ntTSL 5 BASIC6.51□□□□□ -1.37
HOXC12P31275 AC231533.2-201ENST00000419045 978 ntBASIC6.51□□□□□ -1.37
HOXC12P31275 OR5W1P-201ENST00000423705 938 ntBASIC6.51□□□□□ -1.37
HOXC12P31275 AL589794.1-201ENST00000424971 390 ntBASIC6.51□□□□□ -1.37
HOXC12P31275 AF274573.1-201ENST00000430535 494 ntBASIC6.51□□□□□ -1.37
HOXC12P31275 HNRNPA1P57-201ENST00000431359 530 ntTSL 4 BASIC6.51□□□□□ -1.37
HOXC12P31275 AL590399.4-201ENST00000436561 601 ntBASIC6.51□□□□□ -1.37
HOXC12P31275 LINC01762-205ENST00000437308 539 ntTSL 3 BASIC6.51□□□□□ -1.37
HOXC12P31275 AL445465.1-204ENST00000440220 447 ntTSL 3 BASIC6.51□□□□□ -1.37
HOXC12P31275 AQP4-203ENST00000440832 1169 ntTSL 5 BASIC6.51□□□□□ -1.37
HOXC12P31275 FUNDC2P2-202ENST00000443452 493 ntBASIC6.51□□□□□ -1.37
HOXC12P31275 AC083864.2-201ENST00000446024 482 ntTSL 3 BASIC6.51□□□□□ -1.37
HOXC12P31275 AL392046.1-201ENST00000450742 569 ntTSL 5 BASIC6.51□□□□□ -1.37
HOXC12P31275 MRPL42P4-201ENST00000453267 443 ntBASIC6.51□□□□□ -1.37
HOXC12P31275 AC026348.1-201ENST00000462549 1053 ntBASIC6.51□□□□□ -1.37
HOXC12P31275 RN7SL456P-201ENST00000469290 295 ntBASIC6.51□□□□□ -1.37
HOXC12P31275 RPL23AP37-201ENST00000479658 549 ntBASIC6.51□□□□□ -1.37
HOXC12P31275 OR9A1P-202ENST00000484361 945 ntBASIC6.51□□□□□ -1.37
HOXC12P31275 RPL23AP80-201ENST00000495605 424 ntBASIC6.51□□□□□ -1.37
HOXC12P31275 AC080014.1-201ENST00000496877 1201 ntBASIC6.51□□□□□ -1.37
HOXC12P31275 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC6.51□□□□□ -1.37
HOXC12P31275 SUMO2P4-201ENST00000504193 276 ntBASIC6.51□□□□□ -1.37
HOXC12P31275 MTCO3P7-201ENST00000510008 774 ntBASIC6.51□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 92.9 ms