Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
CLIP1P30622 PTPN3-203ENST00000412145 8765 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
CLIP1P30622 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC9.3□□□□□ -0.92
CLIP1P30622 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC9.3□□□□□ -0.92
CLIP1P30622 AC007842.1-201ENST00000597336 2039 ntBASIC9.3□□□□□ -0.92
CLIP1P30622 NAV3-202ENST00000536525 7386 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
CLIP1P30622 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC9.3□□□□□ -0.92
CLIP1P30622 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC9.3□□□□□ -0.92
CLIP1P30622 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC9.3□□□□□ -0.92
CLIP1P30622 AMELX-201ENST00000348912 737 ntTSL 5 BASIC9.3□□□□□ -0.92
CLIP1P30622 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
CLIP1P30622 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC9.3□□□□□ -0.92
CLIP1P30622 NME1P1-201ENST00000420914 382 ntBASIC9.3□□□□□ -0.92
CLIP1P30622 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC9.3□□□□□ -0.92
CLIP1P30622 DEFA9P-201ENST00000433042 285 ntBASIC9.3□□□□□ -0.92
CLIP1P30622 LINC01798-204ENST00000433396 682 ntTSL 3 BASIC9.3□□□□□ -0.92
CLIP1P30622 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC9.3□□□□□ -0.92
CLIP1P30622 AC099786.1-201ENST00000446238 670 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
CLIP1P30622 AL355032.1-201ENST00000472981 438 ntBASIC9.3□□□□□ -0.92
CLIP1P30622 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC9.3□□□□□ -0.92
CLIP1P30622 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC9.3□□□□□ -0.92
CLIP1P30622 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC9.3□□□□□ -0.92
CLIP1P30622 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
CLIP1P30622 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
CLIP1P30622 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
CLIP1P30622 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC9.3□□□□□ -0.92
CLIP1P30622 TCF4-278ENST00000636400 8343 ntTSL 5 BASIC9.3□□□□□ -0.92
CLIP1P30622 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC9.3□□□□□ -0.92
CLIP1P30622 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
CLIP1P30622 APOOL-202ENST00000613473 6445 ntAPPRIS ALT1 TSL 5 BASIC9.29□□□□□ -0.92
CLIP1P30622 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC9.29□□□□□ -0.92
CLIP1P30622 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
CLIP1P30622 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC9.29□□□□□ -0.92
CLIP1P30622 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC9.29□□□□□ -0.92
CLIP1P30622 DICER1-201ENST00000343455 10277 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
CLIP1P30622 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC9.29□□□□□ -0.92
CLIP1P30622 NUMB-201ENST00000355058 3342 ntAPPRIS ALT1 TSL 5 BASIC9.29□□□□□ -0.92
CLIP1P30622 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC9.29□□□□□ -0.92
CLIP1P30622 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC9.29□□□□□ -0.92
CLIP1P30622 RNA5-8SP5-201ENST00000365304 152 ntBASIC9.29□□□□□ -0.92
CLIP1P30622 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC9.29□□□□□ -0.92
CLIP1P30622 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
CLIP1P30622 AL391422.1-201ENST00000402155 436 ntBASIC9.29□□□□□ -0.92
CLIP1P30622 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
CLIP1P30622 FRG2FP-204ENST00000453982 852 ntBASIC9.29□□□□□ -0.92
CLIP1P30622 LCP2-201ENST00000046794 4678 ntAPPRIS P2 TSL 1 (best) BASIC9.29□□□□□ -0.92
CLIP1P30622 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC9.29□□□□□ -0.92
CLIP1P30622 RPL32P33-201ENST00000487023 394 ntBASIC9.29□□□□□ -0.92
CLIP1P30622 AL596275.2-208ENST00000641192 594 ntBASIC9.29□□□□□ -0.92
CLIP1P30622 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
CLIP1P30622 UNC13B-209ENST00000635942 14550 ntAPPRIS ALT2 TSL 5 BASIC9.29□□□□□ -0.92
CLIP1P30622 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
CLIP1P30622 PIK3CB-201ENST00000289153 5919 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
CLIP1P30622 MFSD8-219ENST00000641228 2559 ntBASIC9.28□□□□□ -0.92
CLIP1P30622 AC009948.3-201ENST00000603415 1798 ntBASIC9.28□□□□□ -0.92
CLIP1P30622 MARK2P4-201ENST00000503381 2380 ntBASIC9.28□□□□□ -0.92
CLIP1P30622 OR9K1P-201ENST00000326513 941 ntBASIC9.28□□□□□ -0.92
CLIP1P30622 AL159987.1-201ENST00000347911 293 ntBASIC9.28□□□□□ -0.92
CLIP1P30622 RN7SKP160-201ENST00000363804 340 ntBASIC9.28□□□□□ -0.92
CLIP1P30622 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
CLIP1P30622 AL121835.1-201ENST00000404250 354 ntBASIC9.28□□□□□ -0.92
CLIP1P30622 OR2AT2P-201ENST00000413438 905 ntBASIC9.28□□□□□ -0.92
CLIP1P30622 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC9.28□□□□□ -0.92
CLIP1P30622 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC9.28□□□□□ -0.92
CLIP1P30622 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC9.28□□□□□ -0.92
CLIP1P30622 SLC25A51P1-201ENST00000468432 871 ntBASIC9.28□□□□□ -0.92
CLIP1P30622 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
CLIP1P30622 AC073610.1-201ENST00000489971 396 ntBASIC9.28□□□□□ -0.92
CLIP1P30622 OR7E157P-201ENST00000494376 911 ntBASIC9.28□□□□□ -0.92
CLIP1P30622 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC9.28□□□□□ -0.92
CLIP1P30622 MRPS16P1-201ENST00000523462 412 ntBASIC9.28□□□□□ -0.92
CLIP1P30622 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC9.28□□□□□ -0.92
CLIP1P30622 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC9.28□□□□□ -0.92
CLIP1P30622 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC9.28□□□□□ -0.92
CLIP1P30622 HSPE1P2-201ENST00000554777 306 ntBASIC9.28□□□□□ -0.92
CLIP1P30622 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
CLIP1P30622 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC9.28□□□□□ -0.92
CLIP1P30622 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC9.28□□□□□ -0.92
CLIP1P30622 SUMO2P15-201ENST00000604285 278 ntBASIC9.28□□□□□ -0.92
CLIP1P30622 SDR42E1P1-201ENST00000611327 477 ntBASIC9.28□□□□□ -0.92
CLIP1P30622 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC9.28□□□□□ -0.92
CLIP1P30622 CASC19-243ENST00000641588 1546 ntBASIC9.28□□□□□ -0.92
CLIP1P30622 MDM4-207ENST00000454264 9926 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
CLIP1P30622 UBA2-202ENST00000439527 2802 ntTSL 2 BASIC9.28□□□□□ -0.92
CLIP1P30622 AL161756.3-201ENST00000641216 2071 ntBASIC9.27□□□□□ -0.92
CLIP1P30622 GREM1-203ENST00000622074 14606 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
CLIP1P30622 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
CLIP1P30622 NDRG3-204ENST00000373803 2978 ntTSL 5 BASIC9.27□□□□□ -0.93
CLIP1P30622 PYROXD1-201ENST00000240651 4055 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
CLIP1P30622 TCEANC2-201ENST00000234827 10436 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
CLIP1P30622 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
CLIP1P30622 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
CLIP1P30622 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC9.27□□□□□ -0.93
CLIP1P30622 AL022331.1-201ENST00000429025 477 ntBASIC9.27□□□□□ -0.93
CLIP1P30622 CLUHP1-201ENST00000435012 1190 ntBASIC9.27□□□□□ -0.93
CLIP1P30622 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC9.27□□□□□ -0.93
CLIP1P30622 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
CLIP1P30622 TSACC-207ENST00000470342 601 ntTSL 2 BASIC9.27□□□□□ -0.93
CLIP1P30622 COPS8P2-201ENST00000473228 627 ntBASIC9.27□□□□□ -0.93
CLIP1P30622 TRBV5-2-201ENST00000489095 273 ntBASIC9.27□□□□□ -0.93
Retrieved 100 of 98,524 protein–RNA pairs in 175.3 ms