Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
SHC1P29353 RBMY1HP-201ENST00000382759 1389 ntBASIC5.49□□□□□ -1.53
SHC1P29353 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC5.49□□□□□ -1.53
SHC1P29353 NR1H5P-201ENST00000452683 1377 ntBASIC5.49□□□□□ -1.53
SHC1P29353 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
SHC1P29353 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC5.49□□□□□ -1.53
SHC1P29353 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
SHC1P29353 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
SHC1P29353 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC5.49□□□□□ -1.53
SHC1P29353 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
SHC1P29353 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
SHC1P29353 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.48□□□□□ -1.53
SHC1P29353 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC5.48□□□□□ -1.53
SHC1P29353 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC5.48□□□□□ -1.53
SHC1P29353 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC5.48□□□□□ -1.53
SHC1P29353 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
SHC1P29353 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
SHC1P29353 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC5.48□□□□□ -1.53
SHC1P29353 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC5.48□□□□□ -1.53
SHC1P29353 CRP-204ENST00000368112 787 ntTSL 2 BASIC5.48□□□□□ -1.53
SHC1P29353 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
SHC1P29353 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC5.48□□□□□ -1.53
SHC1P29353 RNU11-201ENST00000387069 134 ntBASIC5.48□□□□□ -1.53
SHC1P29353 CXADRP1-201ENST00000398098 1095 ntBASIC5.48□□□□□ -1.53
SHC1P29353 DNAJA1P3-201ENST00000399417 1194 ntBASIC5.48□□□□□ -1.53
SHC1P29353 SNORA77.2-201ENST00000408571 112 ntBASIC5.48□□□□□ -1.53
SHC1P29353 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC5.48□□□□□ -1.53
SHC1P29353 RPS7P8-201ENST00000418311 581 ntBASIC5.48□□□□□ -1.53
SHC1P29353 RPS15AP30-201ENST00000420976 390 ntBASIC5.48□□□□□ -1.53
SHC1P29353 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC5.48□□□□□ -1.53
SHC1P29353 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC5.48□□□□□ -1.53
SHC1P29353 AC097463.1-201ENST00000447288 481 ntBASIC5.48□□□□□ -1.53
SHC1P29353 PFN2-209ENST00000481275 560 ntTSL 4 BASIC5.48□□□□□ -1.53
SHC1P29353 LDHAP1-201ENST00000509421 992 ntBASIC5.48□□□□□ -1.53
SHC1P29353 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC5.48□□□□□ -1.53
SHC1P29353 RN7SKP238-201ENST00000516483 249 ntBASIC5.48□□□□□ -1.53
SHC1P29353 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC5.48□□□□□ -1.53
SHC1P29353 AC005363.1-201ENST00000530779 351 ntBASIC5.48□□□□□ -1.53
SHC1P29353 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC5.48□□□□□ -1.53
SHC1P29353 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC5.48□□□□□ -1.53
SHC1P29353 NPM1P42-201ENST00000560329 862 ntBASIC5.48□□□□□ -1.53
SHC1P29353 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC5.48□□□□□ -1.53
SHC1P29353 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC5.48□□□□□ -1.53
SHC1P29353 AC134669.1-201ENST00000581275 672 ntBASIC5.48□□□□□ -1.53
SHC1P29353 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC5.48□□□□□ -1.53
SHC1P29353 MIR132-201ENST00000591554 101 ntBASIC5.48□□□□□ -1.53
SHC1P29353 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC5.48□□□□□ -1.53
SHC1P29353 AL360012.1-201ENST00000602813 131 ntBASIC5.48□□□□□ -1.53
SHC1P29353 AL499605.1-201ENST00000604628 403 ntBASIC5.48□□□□□ -1.53
SHC1P29353 AC092266.1-201ENST00000610958 165 ntBASIC5.48□□□□□ -1.53
SHC1P29353 MIR6071-201ENST00000616741 78 ntBASIC5.48□□□□□ -1.53
SHC1P29353 CXADRP3-202ENST00000617265 1100 ntBASIC5.48□□□□□ -1.53
SHC1P29353 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC5.48□□□□□ -1.53
SHC1P29353 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC5.48□□□□□ -1.53
SHC1P29353 AC073488.3-201ENST00000631611 778 ntBASIC5.48□□□□□ -1.53
SHC1P29353 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC5.48□□□□□ -1.53
SHC1P29353 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC5.48□□□□□ -1.53
SHC1P29353 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC5.48□□□□□ -1.53
SHC1P29353 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
SHC1P29353 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
SHC1P29353 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC5.48□□□□□ -1.53
SHC1P29353 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
SHC1P29353 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
SHC1P29353 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC5.48□□□□□ -1.53
SHC1P29353 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
SHC1P29353 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
SHC1P29353 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC5.47□□□□□ -1.53
SHC1P29353 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC5.47□□□□□ -1.53
SHC1P29353 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
SHC1P29353 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
SHC1P29353 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
SHC1P29353 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
SHC1P29353 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
SHC1P29353 AC025470.1-201ENST00000510053 2032 ntBASIC5.47□□□□□ -1.53
SHC1P29353 AL162456.1-201ENST00000634535 2006 ntBASIC5.47□□□□□ -1.53
SHC1P29353 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
SHC1P29353 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
SHC1P29353 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
SHC1P29353 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
SHC1P29353 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC5.47□□□□□ -1.53
SHC1P29353 SNORD1C-201ENST00000363315 78 ntBASIC5.47□□□□□ -1.53
SHC1P29353 OR2L2-201ENST00000366479 1134 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
SHC1P29353 AL096711.1-201ENST00000404780 554 ntBASIC5.47□□□□□ -1.53
SHC1P29353 RPA3-204ENST00000406109 434 ntTSL 3 BASIC5.47□□□□□ -1.53
SHC1P29353 CYTOR-204ENST00000409898 560 ntTSL 5 BASIC5.47□□□□□ -1.53
SHC1P29353 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC5.47□□□□□ -1.53
SHC1P29353 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC5.47□□□□□ -1.53
SHC1P29353 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC5.47□□□□□ -1.53
SHC1P29353 OR5W1P-201ENST00000423705 938 ntBASIC5.47□□□□□ -1.53
SHC1P29353 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
SHC1P29353 AL731534.1-201ENST00000434711 269 ntBASIC5.47□□□□□ -1.53
SHC1P29353 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC5.47□□□□□ -1.53
SHC1P29353 AC110602.1-201ENST00000437414 318 ntBASIC5.47□□□□□ -1.53
SHC1P29353 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC5.47□□□□□ -1.53
SHC1P29353 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC5.47□□□□□ -1.53
SHC1P29353 RPL5P10-201ENST00000445207 894 ntBASIC5.47□□□□□ -1.53
SHC1P29353 RBMY2AP-201ENST00000445405 1157 ntBASIC5.47□□□□□ -1.53
SHC1P29353 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC5.47□□□□□ -1.53
SHC1P29353 REG1CP-206ENST00000447469 496 ntBASIC5.47□□□□□ -1.53
SHC1P29353 RBMY2CP-201ENST00000448575 1157 ntBASIC5.47□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms