Protein–RNA interactions for Protein: P28067

HLA-DMA, HLA class II histocompatibility antigen, DM alpha chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMAP28067 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC5.13□□□□□ -1.59
HLA-DMAP28067 AC097451.1-201ENST00000507388 653 ntTSL 3 BASIC5.13□□□□□ -1.59
HLA-DMAP28067 AC139713.2-204ENST00000511042 342 ntTSL 5 BASIC5.13□□□□□ -1.59
HLA-DMAP28067 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC5.13□□□□□ -1.59
HLA-DMAP28067 GAPDHP62-201ENST00000515313 990 ntBASIC5.13□□□□□ -1.59
HLA-DMAP28067 RN7SKP288-201ENST00000516227 268 ntBASIC5.13□□□□□ -1.59
HLA-DMAP28067 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC5.13□□□□□ -1.59
HLA-DMAP28067 AL355075.1-201ENST00000528210 468 ntTSL 2 BASIC5.13□□□□□ -1.59
HLA-DMAP28067 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC5.13□□□□□ -1.59
HLA-DMAP28067 AC234917.1-201ENST00000534006 316 ntTSL 3 BASIC5.13□□□□□ -1.59
HLA-DMAP28067 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC5.13□□□□□ -1.59
HLA-DMAP28067 AC025430.1-201ENST00000561324 498 ntTSL 3 BASIC5.13□□□□□ -1.59
HLA-DMAP28067 AC106730.2-201ENST00000566641 540 ntBASIC5.13□□□□□ -1.59
HLA-DMAP28067 AC010287.1-201ENST00000566916 357 ntBASIC5.13□□□□□ -1.59
HLA-DMAP28067 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC5.13□□□□□ -1.59
HLA-DMAP28067 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC5.13□□□□□ -1.59
HLA-DMAP28067 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC5.13□□□□□ -1.59
HLA-DMAP28067 AC010139.1-201ENST00000596963 445 ntTSL 5 BASIC5.13□□□□□ -1.59
HLA-DMAP28067 AL513327.3-201ENST00000602618 469 ntBASIC5.13□□□□□ -1.59
HLA-DMAP28067 AL353729.2-201ENST00000605859 1249 ntBASIC5.13□□□□□ -1.59
HLA-DMAP28067 Z95327.3-201ENST00000610385 572 ntBASIC5.13□□□□□ -1.59
HLA-DMAP28067 AC009283.1-201ENST00000615852 645 ntBASIC5.13□□□□□ -1.59
HLA-DMAP28067 AC245033.2-201ENST00000621893 421 ntTSL 3 BASIC5.13□□□□□ -1.59
HLA-DMAP28067 FRG1EP-201ENST00000634469 770 ntBASIC5.13□□□□□ -1.59
HLA-DMAP28067 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
HLA-DMAP28067 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.13□□□□□ -1.59
HLA-DMAP28067 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
HLA-DMAP28067 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
HLA-DMAP28067 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
HLA-DMAP28067 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
HLA-DMAP28067 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.13□□□□□ -1.59
HLA-DMAP28067 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC5.13□□□□□ -1.59
HLA-DMAP28067 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
HLA-DMAP28067 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.13□□□□□ -1.59
HLA-DMAP28067 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
HLA-DMAP28067 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.13□□□□□ -1.59
HLA-DMAP28067 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
HLA-DMAP28067 THAP12P9-201ENST00000503971 2360 ntBASIC5.13□□□□□ -1.59
HLA-DMAP28067 CDC27P2-201ENST00000425026 1922 ntBASIC5.13□□□□□ -1.59
HLA-DMAP28067 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.13□□□□□ -1.59
HLA-DMAP28067 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.13□□□□□ -1.59
HLA-DMAP28067 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC5.13□□□□□ -1.59
HLA-DMAP28067 SLC2A3P2-201ENST00000331747 1480 ntBASIC5.13□□□□□ -1.59
HLA-DMAP28067 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
HLA-DMAP28067 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.13□□□□□ -1.59
HLA-DMAP28067 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
HLA-DMAP28067 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
HLA-DMAP28067 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
HLA-DMAP28067 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
HLA-DMAP28067 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
HLA-DMAP28067 AC011933.2-201ENST00000578539 2790 ntBASIC5.12□□□□□ -1.59
HLA-DMAP28067 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
HLA-DMAP28067 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC5.12□□□□□ -1.59
HLA-DMAP28067 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
HLA-DMAP28067 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
HLA-DMAP28067 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
HLA-DMAP28067 MT1A-201ENST00000290705 396 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
HLA-DMAP28067 IMPA1-202ENST00000311489 1106 ntTSL 2 BASIC5.12□□□□□ -1.59
HLA-DMAP28067 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC5.12□□□□□ -1.59
HLA-DMAP28067 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC5.12□□□□□ -1.59
HLA-DMAP28067 AP001610.2-201ENST00000415820 422 ntTSL 3 BASIC5.12□□□□□ -1.59
HLA-DMAP28067 RPS14P4-201ENST00000415880 418 ntBASIC5.12□□□□□ -1.59
HLA-DMAP28067 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC5.12□□□□□ -1.59
HLA-DMAP28067 PRUNEP1-201ENST00000425846 705 ntBASIC5.12□□□□□ -1.59
HLA-DMAP28067 RPS7P14-201ENST00000426405 583 ntBASIC5.12□□□□□ -1.59
HLA-DMAP28067 SEPT7P3-201ENST00000455017 621 ntBASIC5.12□□□□□ -1.59
HLA-DMAP28067 RN7SL643P-201ENST00000471845 291 ntBASIC5.12□□□□□ -1.59
HLA-DMAP28067 RPS3AP49-201ENST00000472161 790 ntBASIC5.12□□□□□ -1.59
HLA-DMAP28067 AC018645.1-201ENST00000505003 109 ntBASIC5.12□□□□□ -1.59
HLA-DMAP28067 SNX18P24-201ENST00000505249 671 ntBASIC5.12□□□□□ -1.59
HLA-DMAP28067 AC010409.2-201ENST00000505780 478 ntBASIC5.12□□□□□ -1.59
HLA-DMAP28067 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC5.12□□□□□ -1.59
HLA-DMAP28067 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC5.12□□□□□ -1.59
HLA-DMAP28067 AC010634.1-201ENST00000513925 540 ntTSL 3 BASIC5.12□□□□□ -1.59
HLA-DMAP28067 RNA5SP418-201ENST00000515951 117 ntBASIC5.12□□□□□ -1.59
HLA-DMAP28067 SEPT10P1-201ENST00000517342 1162 ntBASIC5.12□□□□□ -1.59
HLA-DMAP28067 IGLVVII-41-1-201ENST00000518405 151 ntBASIC5.12□□□□□ -1.59
HLA-DMAP28067 AC069234.3-201ENST00000544939 569 ntTSL 4 BASIC5.12□□□□□ -1.59
HLA-DMAP28067 UBE2N-204ENST00000549833 960 ntTSL 3 BASIC5.12□□□□□ -1.59
HLA-DMAP28067 MIR7515HG-250ENST00000592565 856 ntTSL 5 BASIC5.12□□□□□ -1.59
HLA-DMAP28067 ZNF431-203ENST00000594425 610 ntTSL 2 BASIC5.12□□□□□ -1.59
HLA-DMAP28067 ZNF431-206ENST00000599296 586 ntTSL 5 BASIC5.12□□□□□ -1.59
HLA-DMAP28067 AL391425.1-201ENST00000613658 807 ntTSL 5 BASIC5.12□□□□□ -1.59
HLA-DMAP28067 AC021766.1-201ENST00000624404 741 ntBASIC5.12□□□□□ -1.59
HLA-DMAP28067 AL353747.4-202ENST00000625787 674 ntTSL 3 BASIC5.12□□□□□ -1.59
HLA-DMAP28067 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.12□□□□□ -1.59
HLA-DMAP28067 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.12□□□□□ -1.59
HLA-DMAP28067 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC5.12□□□□□ -1.59
HLA-DMAP28067 ING3-204ENST00000431467 1447 ntTSL 2 BASIC5.12□□□□□ -1.59
HLA-DMAP28067 AC011503.2-201ENST00000594230 1500 ntBASIC5.12□□□□□ -1.59
HLA-DMAP28067 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
HLA-DMAP28067 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.12□□□□□ -1.59
HLA-DMAP28067 C8orf34-AS1-201ENST00000512294 1600 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
HLA-DMAP28067 CTXN3-201ENST00000379445 1660 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
HLA-DMAP28067 NAMPTP1-201ENST00000440465 2514 ntBASIC5.12□□□□□ -1.59
HLA-DMAP28067 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC5.12□□□□□ -1.59
HLA-DMAP28067 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.11□□□□□ -1.59
HLA-DMAP28067 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.11□□□□□ -1.59
HLA-DMAP28067 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
HLA-DMAP28067 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms