Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC6.04□□□□□ -1.44
CDH3P22223 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC6.04□□□□□ -1.44
CDH3P22223 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CDH3P22223 RN7SKP121-201ENST00000410842 305 ntBASIC6.04□□□□□ -1.44
CDH3P22223 UBE2V1P14-201ENST00000415815 558 ntBASIC6.04□□□□□ -1.44
CDH3P22223 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC6.04□□□□□ -1.44
CDH3P22223 RPSAP65-201ENST00000429660 595 ntBASIC6.04□□□□□ -1.44
CDH3P22223 AC007679.3-201ENST00000434035 414 ntBASIC6.04□□□□□ -1.44
CDH3P22223 KRTAP2-5P-201ENST00000446109 396 ntBASIC6.04□□□□□ -1.44
CDH3P22223 SEPHS1P4-201ENST00000446112 1176 ntBASIC6.04□□□□□ -1.44
CDH3P22223 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC6.04□□□□□ -1.44
CDH3P22223 AC009963.3-201ENST00000458090 486 ntBASIC6.04□□□□□ -1.44
CDH3P22223 RPL5P16-201ENST00000471467 790 ntBASIC6.04□□□□□ -1.44
CDH3P22223 AP002884.1-201ENST00000479691 655 ntBASIC6.04□□□□□ -1.44
CDH3P22223 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC6.04□□□□□ -1.44
CDH3P22223 AC026782.2-201ENST00000510845 636 ntBASIC6.04□□□□□ -1.44
CDH3P22223 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC6.04□□□□□ -1.44
CDH3P22223 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC6.04□□□□□ -1.44
CDH3P22223 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC6.04□□□□□ -1.44
CDH3P22223 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC6.04□□□□□ -1.44
CDH3P22223 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC6.04□□□□□ -1.44
CDH3P22223 AC233702.7-202ENST00000582941 211 ntBASIC6.04□□□□□ -1.44
CDH3P22223 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC6.04□□□□□ -1.44
CDH3P22223 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC6.04□□□□□ -1.44
CDH3P22223 AL499605.1-201ENST00000604628 403 ntBASIC6.04□□□□□ -1.44
CDH3P22223 AC091167.5-201ENST00000605689 894 ntBASIC6.04□□□□□ -1.44
CDH3P22223 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC6.04□□□□□ -1.44
CDH3P22223 AC010998.3-201ENST00000613871 631 ntBASIC6.04□□□□□ -1.44
CDH3P22223 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC6.04□□□□□ -1.44
CDH3P22223 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC6.04□□□□□ -1.44
CDH3P22223 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC6.04□□□□□ -1.44
CDH3P22223 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC6.04□□□□□ -1.44
CDH3P22223 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC6.04□□□□□ -1.44
CDH3P22223 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC6.04□□□□□ -1.44
CDH3P22223 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CDH3P22223 ZNF101P1-201ENST00000435701 1720 ntBASIC6.04□□□□□ -1.44
CDH3P22223 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC6.04□□□□□ -1.44
CDH3P22223 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
CDH3P22223 EEF1A1P24-201ENST00000451469 1378 ntBASIC6.04□□□□□ -1.44
CDH3P22223 SAMM50P1-201ENST00000455403 1399 ntBASIC6.04□□□□□ -1.44
CDH3P22223 EEF1A1P9-201ENST00000514975 1383 ntBASIC6.04□□□□□ -1.44
CDH3P22223 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
CDH3P22223 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
CDH3P22223 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC6.04□□□□□ -1.44
CDH3P22223 NLN-202ENST00000502464 8354 ntTSL 5 BASIC6.03□□□□□ -1.44
CDH3P22223 AC104966.1-201ENST00000467010 1464 ntBASIC6.03□□□□□ -1.44
CDH3P22223 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC6.03□□□□□ -1.44
CDH3P22223 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC6.03□□□□□ -1.44
CDH3P22223 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CDH3P22223 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC6.03□□□□□ -1.44
CDH3P22223 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CDH3P22223 RNA5SP433-201ENST00000364491 114 ntBASIC6.03□□□□□ -1.44
CDH3P22223 OR2L2-201ENST00000366479 1134 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
CDH3P22223 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
CDH3P22223 AL050305.1-201ENST00000399993 1230 ntBASIC6.03□□□□□ -1.44
CDH3P22223 OR7E156P-201ENST00000400303 464 ntBASIC6.03□□□□□ -1.44
CDH3P22223 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CDH3P22223 AC009506.2-201ENST00000420635 840 ntBASIC6.03□□□□□ -1.44
CDH3P22223 AC069154.1-201ENST00000432914 542 ntBASIC6.03□□□□□ -1.44
CDH3P22223 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC6.03□□□□□ -1.44
CDH3P22223 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC6.03□□□□□ -1.44
CDH3P22223 MORF4-201ENST00000447135 971 ntBASIC6.03□□□□□ -1.44
CDH3P22223 HIGD1AP16-201ENST00000450986 258 ntBASIC6.03□□□□□ -1.44
CDH3P22223 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC6.03□□□□□ -1.44
CDH3P22223 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC6.03□□□□□ -1.44
CDH3P22223 PFN1P8-201ENST00000497012 543 ntBASIC6.03□□□□□ -1.44
CDH3P22223 AC105420.1-201ENST00000504389 582 ntBASIC6.03□□□□□ -1.44
CDH3P22223 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
CDH3P22223 AC097486.1-201ENST00000515331 210 ntBASIC6.03□□□□□ -1.44
CDH3P22223 AC009879.1-201ENST00000520029 839 ntBASIC6.03□□□□□ -1.44
CDH3P22223 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC6.03□□□□□ -1.44
CDH3P22223 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC6.03□□□□□ -1.44
CDH3P22223 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC6.03□□□□□ -1.44
CDH3P22223 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC6.03□□□□□ -1.44
CDH3P22223 AC134669.1-201ENST00000581275 672 ntBASIC6.03□□□□□ -1.44
CDH3P22223 AP001267.4-201ENST00000602598 545 ntBASIC6.03□□□□□ -1.44
CDH3P22223 AC079315.1-201ENST00000602952 623 ntBASIC6.03□□□□□ -1.44
CDH3P22223 FAM27E2-201ENST00000619668 403 ntBASIC6.03□□□□□ -1.44
CDH3P22223 AC025262.3-201ENST00000623666 360 ntBASIC6.03□□□□□ -1.44
CDH3P22223 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC6.03□□□□□ -1.44
CDH3P22223 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CDH3P22223 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CDH3P22223 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC6.03□□□□□ -1.44
CDH3P22223 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CDH3P22223 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC6.03□□□□□ -1.44
CDH3P22223 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CDH3P22223 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CDH3P22223 AC097063.1-201ENST00000426714 1797 ntBASIC6.03□□□□□ -1.44
CDH3P22223 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC6.03□□□□□ -1.44
CDH3P22223 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC6.03□□□□□ -1.44
CDH3P22223 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
CDH3P22223 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
CDH3P22223 ATP5A1P4-201ENST00000556888 1605 ntBASIC6.03□□□□□ -1.44
CDH3P22223 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.44
CDH3P22223 AC079753.1-201ENST00000623243 3868 ntBASIC6.02□□□□□ -1.45
CDH3P22223 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC6.02□□□□□ -1.45
CDH3P22223 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
CDH3P22223 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
CDH3P22223 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC6.02□□□□□ -1.45
CDH3P22223 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms