Protein–RNA interactions for Protein: P10645

CHGA, Chromogranin-A, humanhuman

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGAP10645 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
CHGAP10645 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
CHGAP10645 TXNRD1-219ENST00000529546 2018 ntTSL 2 BASIC10.73□□□□□ -0.69
CHGAP10645 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
CHGAP10645 BRAFP1-201ENST00000445336 2703 ntBASIC10.73□□□□□ -0.69
CHGAP10645 AC127459.1-201ENST00000563129 2768 ntBASIC10.73□□□□□ -0.69
CHGAP10645 HDAC1P1-201ENST00000455482 1445 ntBASIC10.73□□□□□ -0.69
CHGAP10645 DCP1B-205ENST00000540622 1547 ntTSL 5 BASIC10.73□□□□□ -0.69
CHGAP10645 AL353753.1-201ENST00000612217 2320 ntTSL 2 BASIC10.73□□□□□ -0.69
CHGAP10645 KIF15-201ENST00000326047 4842 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
CHGAP10645 NEDD1-201ENST00000266742 4046 ntAPPRIS P1 TSL 2 BASIC10.73□□□□□ -0.69
CHGAP10645 MYT1L-AS1-202ENST00000448106 3230 ntTSL 2 BASIC10.73□□□□□ -0.69
CHGAP10645 MGAM-208ENST00000549489 6525 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
CHGAP10645 ZNF790-208ENST00000615484 2451 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
CHGAP10645 ZNF888-202ENST00000638862 4195 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
CHGAP10645 CD96-202ENST00000352690 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
CHGAP10645 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
CHGAP10645 RECQL5-203ENST00000420326 3710 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
CHGAP10645 BRD7P2-201ENST00000466133 1944 ntBASIC10.72□□□□□ -0.69
CHGAP10645 ZNF189-204ENST00000615466 2316 ntTSL 3 BASIC10.72□□□□□ -0.69
CHGAP10645 MYO1A-203ENST00000442789 3658 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
CHGAP10645 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
CHGAP10645 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
CHGAP10645 OR10D1P-201ENST00000355343 936 ntBASIC10.72□□□□□ -0.69
CHGAP10645 FGFR2-213ENST00000369061 3803 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
CHGAP10645 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
CHGAP10645 PAGE2-201ENST00000374965 456 ntTSL 2 BASIC10.72□□□□□ -0.69
CHGAP10645 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC10.72□□□□□ -0.69
CHGAP10645 Y_RNA.554-201ENST00000384672 102 ntBASIC10.72□□□□□ -0.69
CHGAP10645 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
CHGAP10645 CREM-214ENST00000395887 849 ntTSL 5 BASIC10.72□□□□□ -0.69
CHGAP10645 RPL17P50-201ENST00000396131 546 ntBASIC10.72□□□□□ -0.69
CHGAP10645 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
CHGAP10645 AC023469.1-201ENST00000409243 469 ntTSL 3 BASIC10.72□□□□□ -0.69
CHGAP10645 AL353651.1-201ENST00000415629 355 ntTSL 5 BASIC10.72□□□□□ -0.69
CHGAP10645 UBTFL3-201ENST00000418934 1024 ntBASIC10.72□□□□□ -0.69
CHGAP10645 Z97055.1-201ENST00000419730 712 ntBASIC10.72□□□□□ -0.69
CHGAP10645 FAM183DP-201ENST00000421987 399 ntBASIC10.72□□□□□ -0.69
CHGAP10645 GLRXP1-201ENST00000423261 334 ntBASIC10.72□□□□□ -0.69
CHGAP10645 AC112492.2-201ENST00000432774 1030 ntBASIC10.72□□□□□ -0.69
CHGAP10645 BRWD1-IT1-201ENST00000435608 489 ntTSL 3 BASIC10.72□□□□□ -0.69
CHGAP10645 AC097499.1-201ENST00000444277 208 ntBASIC10.72□□□□□ -0.69
CHGAP10645 PAXBP1P1-201ENST00000449315 447 ntBASIC10.72□□□□□ -0.69
CHGAP10645 OR52E7P-201ENST00000452394 933 ntBASIC10.72□□□□□ -0.69
CHGAP10645 CREM-224ENST00000468236 582 ntTSL 3 BASIC10.72□□□□□ -0.69
CHGAP10645 AL121769.1-201ENST00000469473 401 ntBASIC10.72□□□□□ -0.69
CHGAP10645 RN7SL790P-201ENST00000474043 298 ntBASIC10.72□□□□□ -0.69
CHGAP10645 CREM-236ENST00000487763 429 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
CHGAP10645 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
CHGAP10645 AC117473.1-201ENST00000508616 392 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
CHGAP10645 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC10.72□□□□□ -0.69
CHGAP10645 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC10.72□□□□□ -0.69
CHGAP10645 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC10.72□□□□□ -0.69
CHGAP10645 IGKV2-29-201ENST00000521304 372 ntBASIC10.72□□□□□ -0.69
CHGAP10645 AC104248.1-201ENST00000522244 481 ntTSL 3 BASIC10.72□□□□□ -0.69
CHGAP10645 OR4A7P-201ENST00000531463 910 ntBASIC10.72□□□□□ -0.69
CHGAP10645 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
CHGAP10645 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC10.72□□□□□ -0.69
CHGAP10645 LINC02308-201ENST00000555001 637 ntTSL 2 BASIC10.72□□□□□ -0.69
CHGAP10645 AC004825.1-201ENST00000555068 586 ntBASIC10.72□□□□□ -0.69
CHGAP10645 AL358334.3-201ENST00000557343 535 ntTSL 3 BASIC10.72□□□□□ -0.69
CHGAP10645 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC10.72□□□□□ -0.69
CHGAP10645 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC10.72□□□□□ -0.69
CHGAP10645 IQCK-206ENST00000564186 882 ntAPPRIS ALT2 TSL 2 BASIC10.72□□□□□ -0.69
CHGAP10645 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC10.72□□□□□ -0.69
CHGAP10645 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC10.72□□□□□ -0.69
CHGAP10645 LINC00469-203ENST00000579749 583 ntTSL 5 BASIC10.72□□□□□ -0.69
CHGAP10645 AC016405.2-201ENST00000607393 312 ntBASIC10.72□□□□□ -0.69
CHGAP10645 WDR11-AS1-204ENST00000608667 522 ntTSL 5 BASIC10.72□□□□□ -0.69
CHGAP10645 AC093635.1-201ENST00000609028 555 ntBASIC10.72□□□□□ -0.69
CHGAP10645 AL121757.2-201ENST00000611223 313 ntBASIC10.72□□□□□ -0.69
CHGAP10645 TP53TG1_2.1-201ENST00000611226 182 ntBASIC10.72□□□□□ -0.69
CHGAP10645 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
CHGAP10645 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
CHGAP10645 PPFIA2-202ENST00000407050 3903 ntTSL 2 BASIC10.72□□□□□ -0.69
CHGAP10645 PITRM1-AS1-201ENST00000430356 3998 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
CHGAP10645 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
CHGAP10645 B3GALT5-202ENST00000380618 2763 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
CHGAP10645 VN2R3P-201ENST00000422626 1412 ntBASIC10.72□□□□□ -0.69
CHGAP10645 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
CHGAP10645 ANKRD20A10P-201ENST00000457591 1515 ntBASIC10.72□□□□□ -0.69
CHGAP10645 KAT6A-203ENST00000406337 9241 ntAPPRIS P3 TSL 5 BASIC10.72□□□□□ -0.69
CHGAP10645 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC10.72□□□□□ -0.69
CHGAP10645 ZC3H13-201ENST00000242848 8018 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
CHGAP10645 SP140-203ENST00000392045 3246 ntAPPRIS P3 TSL 2 BASIC10.72□□□□□ -0.69
CHGAP10645 TMX2-201ENST00000278422 1631 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
CHGAP10645 SLC16A4-202ENST00000369781 2082 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
CHGAP10645 MGAM-209ENST00000620571 6483 ntTSL 5 BASIC10.72□□□□□ -0.69
CHGAP10645 KIAA0100-201ENST00000389003 6852 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
CHGAP10645 KIAA0100-203ENST00000544884 6856 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
CHGAP10645 SPRYD4-201ENST00000338146 10779 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
CHGAP10645 ASPM-203ENST00000367409 10887 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
CHGAP10645 CYP27C1-201ENST00000335247 4401 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
CHGAP10645 SECISBP2L-201ENST00000261847 6779 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
CHGAP10645 BFAR-201ENST00000261658 3039 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
CHGAP10645 EFCAB1-201ENST00000262103 2051 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
CHGAP10645 CTDSPL-201ENST00000273179 4459 ntAPPRIS P4 TSL 1 (best) BASIC10.71□□□□□ -0.69
CHGAP10645 SLC13A3-202ENST00000290317 3994 ntTSL 5 BASIC10.71□□□□□ -0.69
CHGAP10645 CASP10-203ENST00000313728 1521 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
CHGAP10645 RNU6-707P-201ENST00000364647 95 ntBASIC10.71□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 109.3 ms