Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
FREM3P0C091 DOCK11P1-201ENST00000553480 5932 ntBASIC5.37□□□□□ -1.55
FREM3P0C091 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC5.37□□□□□ -1.55
FREM3P0C091 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
FREM3P0C091 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
FREM3P0C091 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
FREM3P0C091 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC5.37□□□□□ -1.55
FREM3P0C091 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
FREM3P0C091 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC5.37□□□□□ -1.55
FREM3P0C091 GAPDHP48-201ENST00000436626 961 ntBASIC5.37□□□□□ -1.55
FREM3P0C091 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC5.37□□□□□ -1.55
FREM3P0C091 RPL23AP40-201ENST00000487630 390 ntBASIC5.37□□□□□ -1.55
FREM3P0C091 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
FREM3P0C091 HMGN2P36-201ENST00000529541 409 ntBASIC5.37□□□□□ -1.55
FREM3P0C091 OR4A6P-201ENST00000534364 970 ntBASIC5.37□□□□□ -1.55
FREM3P0C091 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC5.37□□□□□ -1.55
FREM3P0C091 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC5.37□□□□□ -1.55
FREM3P0C091 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC5.37□□□□□ -1.55
FREM3P0C091 COX6CP7-201ENST00000597056 208 ntBASIC5.37□□□□□ -1.55
FREM3P0C091 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC5.37□□□□□ -1.55
FREM3P0C091 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC5.37□□□□□ -1.55
FREM3P0C091 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
FREM3P0C091 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
FREM3P0C091 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
FREM3P0C091 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
FREM3P0C091 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
FREM3P0C091 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
FREM3P0C091 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
FREM3P0C091 TRIP11-201ENST00000267622 9996 ntAPPRIS P2 TSL 1 (best) BASIC5.36□□□□□ -1.55
FREM3P0C091 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
FREM3P0C091 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
FREM3P0C091 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
FREM3P0C091 RN7SKP29-201ENST00000410957 272 ntBASIC5.36□□□□□ -1.55
FREM3P0C091 BX323845.3-201ENST00000428215 527 ntBASIC5.36□□□□□ -1.55
FREM3P0C091 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC5.36□□□□□ -1.55
FREM3P0C091 AL161636.2-201ENST00000445179 927 ntBASIC5.36□□□□□ -1.55
FREM3P0C091 AC011476.1-201ENST00000466725 307 ntBASIC5.36□□□□□ -1.55
FREM3P0C091 RPS26P39-201ENST00000469206 341 ntBASIC5.36□□□□□ -1.55
FREM3P0C091 RNA5SP271-201ENST00000516700 88 ntBASIC5.36□□□□□ -1.55
FREM3P0C091 IGLV3-30-201ENST00000524362 298 ntBASIC5.36□□□□□ -1.55
FREM3P0C091 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC5.36□□□□□ -1.55
FREM3P0C091 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC5.36□□□□□ -1.55
FREM3P0C091 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
FREM3P0C091 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
FREM3P0C091 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
FREM3P0C091 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
FREM3P0C091 AC009135.2-201ENST00000624136 1768 ntBASIC5.36□□□□□ -1.55
FREM3P0C091 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
FREM3P0C091 NCAPG2-202ENST00000409339 5253 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
FREM3P0C091 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
FREM3P0C091 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC5.36□□□□□ -1.55
FREM3P0C091 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
FREM3P0C091 NUMB-201ENST00000355058 3342 ntAPPRIS ALT1 TSL 5 BASIC5.36□□□□□ -1.55
FREM3P0C091 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.36□□□□□ -1.55
FREM3P0C091 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
FREM3P0C091 RN7SKP292-201ENST00000365522 317 ntBASIC5.36□□□□□ -1.55
FREM3P0C091 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
FREM3P0C091 AC087752.1-201ENST00000391360 558 ntBASIC5.36□□□□□ -1.55
FREM3P0C091 CDY17P-201ENST00000414121 1282 ntBASIC5.36□□□□□ -1.55
FREM3P0C091 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC5.36□□□□□ -1.55
FREM3P0C091 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC5.36□□□□□ -1.55
FREM3P0C091 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC5.36□□□□□ -1.55
FREM3P0C091 BX119321.1-201ENST00000428912 797 ntBASIC5.36□□□□□ -1.55
FREM3P0C091 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC5.36□□□□□ -1.55
FREM3P0C091 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC5.36□□□□□ -1.55
FREM3P0C091 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC5.36□□□□□ -1.55
FREM3P0C091 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC5.36□□□□□ -1.55
FREM3P0C091 AC109439.2-201ENST00000502421 564 ntTSL 4 BASIC5.36□□□□□ -1.55
FREM3P0C091 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC5.36□□□□□ -1.55
FREM3P0C091 AC090424.1-201ENST00000535243 736 ntBASIC5.36□□□□□ -1.55
FREM3P0C091 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
FREM3P0C091 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC5.36□□□□□ -1.55
FREM3P0C091 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
FREM3P0C091 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC5.36□□□□□ -1.55
FREM3P0C091 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC5.36□□□□□ -1.55
FREM3P0C091 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
FREM3P0C091 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC5.36□□□□□ -1.55
FREM3P0C091 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
FREM3P0C091 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC5.35□□□□□ -1.55
FREM3P0C091 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
FREM3P0C091 AC004690.2-201ENST00000472838 1754 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
FREM3P0C091 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
FREM3P0C091 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC5.35□□□□□ -1.55
FREM3P0C091 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
FREM3P0C091 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC5.35□□□□□ -1.55
FREM3P0C091 AC106872.5-201ENST00000508856 1416 ntBASIC5.35□□□□□ -1.55
FREM3P0C091 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
FREM3P0C091 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
FREM3P0C091 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC5.35□□□□□ -1.55
FREM3P0C091 AC019205.1-201ENST00000421830 730 ntBASIC5.35□□□□□ -1.55
FREM3P0C091 AC099677.3-201ENST00000427081 395 ntBASIC5.35□□□□□ -1.55
FREM3P0C091 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC5.35□□□□□ -1.55
FREM3P0C091 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC5.35□□□□□ -1.55
FREM3P0C091 PPIAP20-201ENST00000449839 135 ntBASIC5.35□□□□□ -1.55
FREM3P0C091 AC110749.1-201ENST00000462007 357 ntBASIC5.35□□□□□ -1.55
FREM3P0C091 RPS3AP15-201ENST00000483874 781 ntBASIC5.35□□□□□ -1.55
FREM3P0C091 RN7SL57P-201ENST00000493687 290 ntBASIC5.35□□□□□ -1.55
FREM3P0C091 RN7SL101P-201ENST00000496350 279 ntBASIC5.35□□□□□ -1.55
FREM3P0C091 AC104109.1-201ENST00000498563 436 ntBASIC5.35□□□□□ -1.55
FREM3P0C091 OR5H7P-201ENST00000514084 930 ntBASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 86.3 ms