Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC6.54□□□□□ -1.36
RB1P06400 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
RB1P06400 FGG-205ENST00000407946 1636 ntTSL 5 BASIC6.54□□□□□ -1.36
RB1P06400 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC6.53□□□□□ -1.36
RB1P06400 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC6.53□□□□□ -1.36
RB1P06400 TTLL5-217ENST00000556893 3071 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
RB1P06400 AC005332.9-201ENST00000620266 2921 ntBASIC6.53□□□□□ -1.36
RB1P06400 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
RB1P06400 CCR9-204ENST00000422395 1331 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
RB1P06400 AL117378.2-201ENST00000622916 1337 ntBASIC6.53□□□□□ -1.36
RB1P06400 SCAPER-203ENST00000538941 4853 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
RB1P06400 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
RB1P06400 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
RB1P06400 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
RB1P06400 MAPK10-261ENST00000641050 3109 ntBASIC6.53□□□□□ -1.36
RB1P06400 ING3-204ENST00000431467 1447 ntTSL 2 BASIC6.53□□□□□ -1.36
RB1P06400 EGFEM1P-205ENST00000483846 2327 ntTSL 5 BASIC6.53□□□□□ -1.36
RB1P06400 MTAP-210ENST00000580900 7557 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
RB1P06400 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
RB1P06400 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
RB1P06400 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
RB1P06400 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC6.53□□□□□ -1.36
RB1P06400 RNA5SP478-201ENST00000364657 115 ntBASIC6.53□□□□□ -1.36
RB1P06400 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC6.53□□□□□ -1.36
RB1P06400 AL096829.1-201ENST00000413677 457 ntBASIC6.53□□□□□ -1.36
RB1P06400 AL354890.1-201ENST00000413730 346 ntBASIC6.53□□□□□ -1.36
RB1P06400 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC6.53□□□□□ -1.36
RB1P06400 RPL35AP3-201ENST00000414680 288 ntBASIC6.53□□□□□ -1.36
RB1P06400 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC6.53□□□□□ -1.36
RB1P06400 FCF1P7-201ENST00000451185 558 ntBASIC6.53□□□□□ -1.36
RB1P06400 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC6.53□□□□□ -1.36
RB1P06400 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC6.53□□□□□ -1.36
RB1P06400 EIF3LP3-201ENST00000495197 822 ntBASIC6.53□□□□□ -1.36
RB1P06400 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC6.53□□□□□ -1.36
RB1P06400 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
RB1P06400 RNU6-751P-201ENST00000516382 101 ntBASIC6.53□□□□□ -1.36
RB1P06400 AC073581.1-201ENST00000519036 575 ntBASIC6.53□□□□□ -1.36
RB1P06400 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC6.53□□□□□ -1.36
RB1P06400 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC6.53□□□□□ -1.36
RB1P06400 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC6.53□□□□□ -1.36
RB1P06400 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC6.53□□□□□ -1.36
RB1P06400 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC6.53□□□□□ -1.36
RB1P06400 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC6.53□□□□□ -1.36
RB1P06400 MIR6719-201ENST00000622428 87 ntBASIC6.53□□□□□ -1.36
RB1P06400 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
RB1P06400 AL357562.1-201ENST00000624911 609 ntBASIC6.53□□□□□ -1.36
RB1P06400 AC053481.2-202ENST00000582394 1500 ntBASIC6.53□□□□□ -1.36
RB1P06400 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC6.53□□□□□ -1.36
RB1P06400 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
RB1P06400 LINC01616-201ENST00000561816 2280 ntBASIC6.53□□□□□ -1.36
RB1P06400 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
RB1P06400 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
RB1P06400 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
RB1P06400 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC6.53□□□□□ -1.36
RB1P06400 Z83820.1-201ENST00000456978 1499 ntBASIC6.53□□□□□ -1.36
RB1P06400 AC105235.1-201ENST00000623208 1816 ntBASIC6.53□□□□□ -1.36
RB1P06400 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC6.52□□□□□ -1.36
RB1P06400 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC6.52□□□□□ -1.36
RB1P06400 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.36
RB1P06400 FRMD5-211ENST00000618556 5059 ntTSL 5 BASIC6.52□□□□□ -1.36
RB1P06400 NKRF-204ENST00000542113 3351 ntTSL 3 BASIC6.52□□□□□ -1.37
RB1P06400 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
RB1P06400 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
RB1P06400 USP32-214ENST00000592339 4045 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
RB1P06400 LINC01903-201ENST00000580659 2149 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
RB1P06400 RPGRIP1L-206ENST00000564374 3877 ntTSL 2 BASIC6.52□□□□□ -1.37
RB1P06400 AC105114.1-201ENST00000624795 1862 ntBASIC6.52□□□□□ -1.37
RB1P06400 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
RB1P06400 ADTRP-201ENST00000229583 891 ntTSL 2 BASIC6.52□□□□□ -1.37
RB1P06400 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
RB1P06400 FUNDC2P3-201ENST00000334716 533 ntBASIC6.52□□□□□ -1.37
RB1P06400 SNORA43.1-201ENST00000364863 140 ntBASIC6.52□□□□□ -1.37
RB1P06400 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
RB1P06400 LSM5-203ENST00000409782 649 ntTSL 5 BASIC6.52□□□□□ -1.37
RB1P06400 AC013268.2-201ENST00000420753 337 ntBASIC6.52□□□□□ -1.37
RB1P06400 YY1P1-201ENST00000427625 668 ntBASIC6.52□□□□□ -1.37
RB1P06400 MRPS21P3-201ENST00000436696 262 ntBASIC6.52□□□□□ -1.37
RB1P06400 AC002504.1-201ENST00000438281 691 ntBASIC6.52□□□□□ -1.37
RB1P06400 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC6.52□□□□□ -1.37
RB1P06400 LINC01831-201ENST00000449772 493 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
RB1P06400 AC002075.1-201ENST00000457396 676 ntBASIC6.52□□□□□ -1.37
RB1P06400 RNU7-157P-201ENST00000459600 66 ntBASIC6.52□□□□□ -1.37
RB1P06400 AC008410.1-201ENST00000483777 339 ntBASIC6.52□□□□□ -1.37
RB1P06400 AC114728.1-201ENST00000488289 483 ntBASIC6.52□□□□□ -1.37
RB1P06400 RN7SL466P-201ENST00000497546 295 ntBASIC6.52□□□□□ -1.37
RB1P06400 SNORA58-201ENST00000505219 137 ntBASIC6.52□□□□□ -1.37
RB1P06400 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC6.52□□□□□ -1.37
RB1P06400 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC6.52□□□□□ -1.37
RB1P06400 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC6.52□□□□□ -1.37
RB1P06400 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC6.52□□□□□ -1.37
RB1P06400 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC6.52□□□□□ -1.37
RB1P06400 DCN-209ENST00000546745 1026 ntTSL 3 BASIC6.52□□□□□ -1.37
RB1P06400 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC6.52□□□□□ -1.37
RB1P06400 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC6.52□□□□□ -1.37
RB1P06400 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC6.52□□□□□ -1.37
RB1P06400 AC026992.2-201ENST00000570122 766 ntTSL 5 BASIC6.52□□□□□ -1.37
RB1P06400 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC6.52□□□□□ -1.37
RB1P06400 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC6.52□□□□□ -1.37
RB1P06400 AC104695.2-201ENST00000605056 775 ntBASIC6.52□□□□□ -1.37
RB1P06400 MIR6730-201ENST00000622213 67 ntBASIC6.52□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms