Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
CHRNA1P02708 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC6.55□□□□□ -1.36
CHRNA1P02708 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
CHRNA1P02708 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
CHRNA1P02708 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
CHRNA1P02708 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
CHRNA1P02708 AL391361.1-201ENST00000405580 489 ntBASIC6.55□□□□□ -1.36
CHRNA1P02708 MTND4LP17-201ENST00000414607 293 ntBASIC6.55□□□□□ -1.36
CHRNA1P02708 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC6.55□□□□□ -1.36
CHRNA1P02708 MARK2P12-201ENST00000420129 585 ntBASIC6.55□□□□□ -1.36
CHRNA1P02708 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC6.55□□□□□ -1.36
CHRNA1P02708 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC6.55□□□□□ -1.36
CHRNA1P02708 GAPDHP48-201ENST00000436626 961 ntBASIC6.55□□□□□ -1.36
CHRNA1P02708 AC002504.1-201ENST00000438281 691 ntBASIC6.55□□□□□ -1.36
CHRNA1P02708 RPS7P3-201ENST00000443360 580 ntBASIC6.55□□□□□ -1.36
CHRNA1P02708 OR13K1P-201ENST00000444577 975 ntBASIC6.55□□□□□ -1.36
CHRNA1P02708 AL022237.1-201ENST00000446663 358 ntBASIC6.55□□□□□ -1.36
CHRNA1P02708 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
CHRNA1P02708 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC6.55□□□□□ -1.36
CHRNA1P02708 KCTD9P4-201ENST00000526766 1166 ntBASIC6.55□□□□□ -1.36
CHRNA1P02708 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC6.55□□□□□ -1.36
CHRNA1P02708 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC6.55□□□□□ -1.36
CHRNA1P02708 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
CHRNA1P02708 AC015802.2-201ENST00000589690 189 ntBASIC6.55□□□□□ -1.36
CHRNA1P02708 CASC22-202ENST00000628396 802 ntTSL 5 BASIC6.55□□□□□ -1.36
CHRNA1P02708 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
CHRNA1P02708 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC6.55□□□□□ -1.36
CHRNA1P02708 ADA2-206ENST00000449907 4278 ntAPPRIS ALT2 TSL 2 BASIC6.55□□□□□ -1.36
CHRNA1P02708 VEGFD-201ENST00000297904 2037 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
CHRNA1P02708 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC6.55□□□□□ -1.36
CHRNA1P02708 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
CHRNA1P02708 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
CHRNA1P02708 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
CHRNA1P02708 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC6.55□□□□□ -1.36
CHRNA1P02708 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
CHRNA1P02708 CR788268.1-201ENST00000603931 1809 ntBASIC6.55□□□□□ -1.36
CHRNA1P02708 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
CHRNA1P02708 PARP4P2-201ENST00000446672 3326 ntBASIC6.55□□□□□ -1.36
CHRNA1P02708 ZBTB8B-201ENST00000609129 12834 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
CHRNA1P02708 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
CHRNA1P02708 AL117378.2-201ENST00000622916 1337 ntBASIC6.54□□□□□ -1.36
CHRNA1P02708 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
CHRNA1P02708 IGSF6-201ENST00000268389 2785 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
CHRNA1P02708 MR1-209ENST00000617803 7584 ntTSL 5 BASIC6.54□□□□□ -1.36
CHRNA1P02708 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
CHRNA1P02708 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC6.54□□□□□ -1.36
CHRNA1P02708 AC022034.1-201ENST00000512867 2156 ntBASIC6.54□□□□□ -1.36
CHRNA1P02708 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC6.54□□□□□ -1.36
CHRNA1P02708 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
CHRNA1P02708 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
CHRNA1P02708 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC6.54□□□□□ -1.36
CHRNA1P02708 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC6.54□□□□□ -1.36
CHRNA1P02708 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
CHRNA1P02708 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
CHRNA1P02708 SNORA64.1-201ENST00000362600 132 ntBASIC6.54□□□□□ -1.36
CHRNA1P02708 RNA5SP394-201ENST00000364216 119 ntBASIC6.54□□□□□ -1.36
CHRNA1P02708 TPT1-204ENST00000379060 764 ntTSL 5 BASIC6.54□□□□□ -1.36
CHRNA1P02708 MIR143-201ENST00000385300 106 ntBASIC6.54□□□□□ -1.36
CHRNA1P02708 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC6.54□□□□□ -1.36
CHRNA1P02708 MRPL53P1-201ENST00000414323 319 ntBASIC6.54□□□□□ -1.36
CHRNA1P02708 RPL34P3-201ENST00000421454 338 ntBASIC6.54□□□□□ -1.36
CHRNA1P02708 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC6.54□□□□□ -1.36
CHRNA1P02708 AC127526.2-201ENST00000426436 775 ntBASIC6.54□□□□□ -1.36
CHRNA1P02708 AL445928.1-201ENST00000435545 222 ntBASIC6.54□□□□□ -1.36
CHRNA1P02708 AC103563.5-201ENST00000455643 364 ntBASIC6.54□□□□□ -1.36
CHRNA1P02708 RN7SL629P-201ENST00000489622 285 ntBASIC6.54□□□□□ -1.36
CHRNA1P02708 AOX3P-204ENST00000491025 2107 ntBASIC6.54□□□□□ -1.36
CHRNA1P02708 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC6.54□□□□□ -1.36
CHRNA1P02708 IGLV3-30-201ENST00000524362 298 ntBASIC6.54□□□□□ -1.36
CHRNA1P02708 HMGN2P36-201ENST00000529541 409 ntBASIC6.54□□□□□ -1.36
CHRNA1P02708 LDHC-203ENST00000535809 757 ntTSL 5 BASIC6.54□□□□□ -1.36
CHRNA1P02708 LDHC-205ENST00000537486 583 ntTSL 5 BASIC6.54□□□□□ -1.36
CHRNA1P02708 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC6.54□□□□□ -1.36
CHRNA1P02708 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC6.54□□□□□ -1.36
CHRNA1P02708 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
CHRNA1P02708 AL589674.2-201ENST00000604304 337 ntBASIC6.54□□□□□ -1.36
CHRNA1P02708 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC6.54□□□□□ -1.36
CHRNA1P02708 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC6.54□□□□□ -1.36
CHRNA1P02708 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
CHRNA1P02708 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC6.54□□□□□ -1.36
CHRNA1P02708 EXPH5-203ENST00000525344 6542 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
CHRNA1P02708 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
CHRNA1P02708 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
CHRNA1P02708 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC6.54□□□□□ -1.36
CHRNA1P02708 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC6.54□□□□□ -1.36
CHRNA1P02708 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
CHRNA1P02708 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC6.53□□□□□ -1.36
CHRNA1P02708 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
CHRNA1P02708 AC006600.2-201ENST00000624834 2506 ntBASIC6.53□□□□□ -1.36
CHRNA1P02708 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
CHRNA1P02708 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
CHRNA1P02708 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC6.53□□□□□ -1.36
CHRNA1P02708 FTO-215ENST00000636491 1676 ntTSL 5 BASIC6.53□□□□□ -1.36
CHRNA1P02708 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC6.53□□□□□ -1.36
CHRNA1P02708 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
CHRNA1P02708 NUDT13-206ENST00000537969 2151 ntTSL 2 BASIC6.53□□□□□ -1.36
CHRNA1P02708 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
CHRNA1P02708 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
CHRNA1P02708 HMGB1P20-201ENST00000402555 677 ntBASIC6.53□□□□□ -1.36
CHRNA1P02708 LINC00463-201ENST00000413501 1147 ntTSL 3 BASIC6.53□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms