Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 AC097467.3-215ENST00000609486 793 ntTSL 5 BASIC4.47□□□□□ -1.69
HLA-DQA1P01909 AC097467.3-214ENST00000610249 843 ntTSL 5 BASIC4.47□□□□□ -1.69
HLA-DQA1P01909 MBD5-221ENST00000637159 902 ntTSL 5 BASIC4.47□□□□□ -1.69
HLA-DQA1P01909 MTCO1P46-201ENST00000451639 1491 ntBASIC4.47□□□□□ -1.69
HLA-DQA1P01909 AC095038.1-201ENST00000429248 1591 ntBASIC4.47□□□□□ -1.69
HLA-DQA1P01909 AC007938.2-201ENST00000604666 2634 ntBASIC4.47□□□□□ -1.69
HLA-DQA1P01909 AC092701.1-201ENST00000623627 1551 ntBASIC4.47□□□□□ -1.69
HLA-DQA1P01909 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC4.47□□□□□ -1.69
HLA-DQA1P01909 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
HLA-DQA1P01909 AC006484.1-201ENST00000435086 1884 ntBASIC4.47□□□□□ -1.69
HLA-DQA1P01909 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
HLA-DQA1P01909 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC4.47□□□□□ -1.69
HLA-DQA1P01909 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC4.47□□□□□ -1.69
HLA-DQA1P01909 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
HLA-DQA1P01909 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.47□□□□□ -1.69
HLA-DQA1P01909 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC4.47□□□□□ -1.69
HLA-DQA1P01909 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC4.46□□□□□ -1.69
HLA-DQA1P01909 C8orf34-AS1-201ENST00000512294 1600 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
HLA-DQA1P01909 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
HLA-DQA1P01909 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC4.46□□□□□ -1.69
HLA-DQA1P01909 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.69
HLA-DQA1P01909 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
HLA-DQA1P01909 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC4.46□□□□□ -1.7
HLA-DQA1P01909 MAP3K19-206ENST00000392918 1460 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
HLA-DQA1P01909 AL353743.3-201ENST00000442109 1468 ntBASIC4.46□□□□□ -1.7
HLA-DQA1P01909 DCSTAMP-208ENST00000622554 1471 ntTSL 5 BASIC4.46□□□□□ -1.7
HLA-DQA1P01909 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC4.46□□□□□ -1.7
HLA-DQA1P01909 SMG1P4-204ENST00000523028 4131 ntBASIC4.46□□□□□ -1.7
HLA-DQA1P01909 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC4.46□□□□□ -1.7
HLA-DQA1P01909 RN7SKP130-201ENST00000364924 301 ntBASIC4.46□□□□□ -1.7
HLA-DQA1P01909 AP000812.1-201ENST00000378140 477 ntTSL 3 BASIC4.46□□□□□ -1.7
HLA-DQA1P01909 TP63-205ENST00000392461 1251 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
HLA-DQA1P01909 RN7SKP281-201ENST00000410472 352 ntBASIC4.46□□□□□ -1.7
HLA-DQA1P01909 AL359962.1-201ENST00000417969 303 ntTSL 5 BASIC4.46□□□□□ -1.7
HLA-DQA1P01909 AC009784.1-201ENST00000426484 460 ntBASIC4.46□□□□□ -1.7
HLA-DQA1P01909 AL451164.3-201ENST00000441377 447 ntTSL 5 BASIC4.46□□□□□ -1.7
HLA-DQA1P01909 LINC01832-201ENST00000446520 553 ntTSL 4 BASIC4.46□□□□□ -1.7
HLA-DQA1P01909 RPL7AP71-201ENST00000451120 739 ntBASIC4.46□□□□□ -1.7
HLA-DQA1P01909 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
HLA-DQA1P01909 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC4.46□□□□□ -1.7
HLA-DQA1P01909 ACA64.4-201ENST00000459070 127 ntBASIC4.46□□□□□ -1.7
HLA-DQA1P01909 TFP1-201ENST00000460564 572 ntTSL 4 BASIC4.46□□□□□ -1.7
HLA-DQA1P01909 TFP1-203ENST00000490470 561 ntTSL 4 BASIC4.46□□□□□ -1.7
HLA-DQA1P01909 AC023424.1-201ENST00000496058 459 ntBASIC4.46□□□□□ -1.7
HLA-DQA1P01909 AC093766.1-201ENST00000502606 866 ntTSL 3 BASIC4.46□□□□□ -1.7
HLA-DQA1P01909 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC4.46□□□□□ -1.7
HLA-DQA1P01909 SNX24-205ENST00000506996 588 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
HLA-DQA1P01909 AC109588.1-201ENST00000507759 726 ntTSL 3 BASIC4.46□□□□□ -1.7
HLA-DQA1P01909 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC4.46□□□□□ -1.7
HLA-DQA1P01909 GAPDHP62-201ENST00000515313 990 ntBASIC4.46□□□□□ -1.7
HLA-DQA1P01909 AC105150.1-201ENST00000518011 551 ntTSL 3 BASIC4.46□□□□□ -1.7
HLA-DQA1P01909 AC020937.1-201ENST00000519677 1013 ntBASIC4.46□□□□□ -1.7
HLA-DQA1P01909 SETP17-201ENST00000534163 817 ntBASIC4.46□□□□□ -1.7
HLA-DQA1P01909 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC4.46□□□□□ -1.7
HLA-DQA1P01909 GNG2-203ENST00000553432 577 ntTSL 4 BASIC4.46□□□□□ -1.7
HLA-DQA1P01909 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC4.46□□□□□ -1.7
HLA-DQA1P01909 AC025040.1-201ENST00000560375 1284 ntTSL 2 BASIC4.46□□□□□ -1.7
HLA-DQA1P01909 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC4.46□□□□□ -1.7
HLA-DQA1P01909 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC4.46□□□□□ -1.7
HLA-DQA1P01909 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
HLA-DQA1P01909 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC4.46□□□□□ -1.7
HLA-DQA1P01909 CCL15-204ENST00000617897 1073 ntAPPRIS P2 TSL 1 (best) BASIC4.46□□□□□ -1.7
HLA-DQA1P01909 CT45A6-202ENST00000620654 878 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
HLA-DQA1P01909 AC027559.1-201ENST00000636288 271 ntBASIC4.46□□□□□ -1.7
HLA-DQA1P01909 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
HLA-DQA1P01909 CDH12-208ENST00000522262 3028 ntTSL 2 BASIC4.46□□□□□ -1.7
HLA-DQA1P01909 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
HLA-DQA1P01909 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
HLA-DQA1P01909 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
HLA-DQA1P01909 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
HLA-DQA1P01909 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
HLA-DQA1P01909 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
HLA-DQA1P01909 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
HLA-DQA1P01909 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
HLA-DQA1P01909 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
HLA-DQA1P01909 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
HLA-DQA1P01909 PPP1R11-206ENST00000376773 1640 ntTSL 3 BASIC4.46□□□□□ -1.7
HLA-DQA1P01909 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC4.46□□□□□ -1.7
HLA-DQA1P01909 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC4.46□□□□□ -1.7
HLA-DQA1P01909 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
HLA-DQA1P01909 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
HLA-DQA1P01909 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
HLA-DQA1P01909 MUC2-202ENST00000613187 4845 ntBASIC4.46□□□□□ -1.7
HLA-DQA1P01909 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
HLA-DQA1P01909 AC126474.2-201ENST00000623268 1750 ntBASIC4.45□□□□□ -1.7
HLA-DQA1P01909 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
HLA-DQA1P01909 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC4.45□□□□□ -1.7
HLA-DQA1P01909 AC112198.2-201ENST00000426589 6996 ntBASIC4.45□□□□□ -1.7
HLA-DQA1P01909 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC4.45□□□□□ -1.7
HLA-DQA1P01909 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
HLA-DQA1P01909 CALB1-208ENST00000518457 1490 ntTSL 2 BASIC4.45□□□□□ -1.7
HLA-DQA1P01909 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
HLA-DQA1P01909 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
HLA-DQA1P01909 OR4D11-201ENST00000313253 936 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
HLA-DQA1P01909 SEC61G-201ENST00000352861 462 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
HLA-DQA1P01909 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
HLA-DQA1P01909 MGST1-205ENST00000396210 914 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
HLA-DQA1P01909 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC4.45□□□□□ -1.7
HLA-DQA1P01909 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC4.45□□□□□ -1.7
HLA-DQA1P01909 RNGTTP1-201ENST00000420965 728 ntBASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 85.7 ms