Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC5.98□□□□□ -1.45
LDLRP01130 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
LDLRP01130 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC5.98□□□□□ -1.45
LDLRP01130 AC091167.5-201ENST00000605689 894 ntBASIC5.98□□□□□ -1.45
LDLRP01130 AC007100.1-201ENST00000606382 478 ntTSL 5 BASIC5.98□□□□□ -1.45
LDLRP01130 AC093388.1-201ENST00000609166 430 ntBASIC5.98□□□□□ -1.45
LDLRP01130 AC073389.3-201ENST00000609434 935 ntBASIC5.98□□□□□ -1.45
LDLRP01130 AC103798.2-201ENST00000624292 632 ntBASIC5.98□□□□□ -1.45
LDLRP01130 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
LDLRP01130 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
LDLRP01130 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
LDLRP01130 AC012078.1-201ENST00000405035 1646 ntBASIC5.98□□□□□ -1.45
LDLRP01130 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.98□□□□□ -1.45
LDLRP01130 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
LDLRP01130 AC022164.1-201ENST00000568767 2673 ntBASIC5.98□□□□□ -1.45
LDLRP01130 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
LDLRP01130 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
LDLRP01130 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
LDLRP01130 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
LDLRP01130 AC027575.3-201ENST00000583058 2747 ntBASIC5.97□□□□□ -1.45
LDLRP01130 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
LDLRP01130 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC5.97□□□□□ -1.45
LDLRP01130 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC5.97□□□□□ -1.45
LDLRP01130 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC5.97□□□□□ -1.45
LDLRP01130 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
LDLRP01130 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
LDLRP01130 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
LDLRP01130 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
LDLRP01130 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC5.97□□□□□ -1.45
LDLRP01130 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
LDLRP01130 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
LDLRP01130 ARGFX-201ENST00000334384 992 ntAPPRIS P1 TSL 3 BASIC5.97□□□□□ -1.45
LDLRP01130 RN7SKP81-201ENST00000365603 331 ntBASIC5.97□□□□□ -1.45
LDLRP01130 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
LDLRP01130 RNU11-201ENST00000387069 134 ntBASIC5.97□□□□□ -1.45
LDLRP01130 AL096800.1-201ENST00000405326 893 ntBASIC5.97□□□□□ -1.45
LDLRP01130 NACAP7-201ENST00000407371 609 ntBASIC5.97□□□□□ -1.45
LDLRP01130 HMGN1P20-201ENST00000411849 300 ntBASIC5.97□□□□□ -1.45
LDLRP01130 AC244453.4-201ENST00000419150 388 ntBASIC5.97□□□□□ -1.45
LDLRP01130 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
LDLRP01130 AC092865.3-201ENST00000425390 1026 ntBASIC5.97□□□□□ -1.45
LDLRP01130 HMGB1P32-201ENST00000425971 565 ntBASIC5.97□□□□□ -1.45
LDLRP01130 AC092651.1-201ENST00000426110 312 ntBASIC5.97□□□□□ -1.45
LDLRP01130 BRWD1P3-201ENST00000428816 390 ntBASIC5.97□□□□□ -1.45
LDLRP01130 CLUHP1-201ENST00000435012 1190 ntBASIC5.97□□□□□ -1.45
LDLRP01130 AL590399.4-201ENST00000436561 601 ntBASIC5.97□□□□□ -1.45
LDLRP01130 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
LDLRP01130 RPS27AP3-201ENST00000453803 454 ntBASIC5.97□□□□□ -1.45
LDLRP01130 AL035690.1-201ENST00000490892 383 ntBASIC5.97□□□□□ -1.45
LDLRP01130 AL390198.2-201ENST00000510553 222 ntBASIC5.97□□□□□ -1.45
LDLRP01130 AC106800.3-201ENST00000511389 308 ntBASIC5.97□□□□□ -1.45
LDLRP01130 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC5.97□□□□□ -1.45
LDLRP01130 HMGN1P17-201ENST00000513734 295 ntBASIC5.97□□□□□ -1.45
LDLRP01130 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC5.97□□□□□ -1.45
LDLRP01130 AC027308.1-201ENST00000517993 110 ntBASIC5.97□□□□□ -1.45
LDLRP01130 AC008429.4-201ENST00000521201 182 ntBASIC5.97□□□□□ -1.45
LDLRP01130 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC5.97□□□□□ -1.45
LDLRP01130 ASB8-203ENST00000535988 679 ntTSL 2 BASIC5.97□□□□□ -1.45
LDLRP01130 RERGL-203ENST00000538724 973 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
LDLRP01130 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC5.97□□□□□ -1.45
LDLRP01130 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC5.97□□□□□ -1.45
LDLRP01130 AC026956.1-201ENST00000558741 396 ntBASIC5.97□□□□□ -1.45
LDLRP01130 HMGN2P47-201ENST00000559378 272 ntBASIC5.97□□□□□ -1.45
LDLRP01130 AC234775.3-201ENST00000564612 656 ntBASIC5.97□□□□□ -1.45
LDLRP01130 SYPL1P2-201ENST00000582878 727 ntBASIC5.97□□□□□ -1.45
LDLRP01130 AC009303.3-201ENST00000591103 736 ntBASIC5.97□□□□□ -1.45
LDLRP01130 AL360012.1-201ENST00000602813 131 ntBASIC5.97□□□□□ -1.45
LDLRP01130 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC5.97□□□□□ -1.45
LDLRP01130 BACH1-IT2-202ENST00000608072 691 ntTSL 5 BASIC5.97□□□□□ -1.45
LDLRP01130 SMR3B-204ENST00000614072 783 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
LDLRP01130 AF117829.2-201ENST00000619538 361 ntBASIC5.97□□□□□ -1.45
LDLRP01130 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC5.97□□□□□ -1.45
LDLRP01130 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
LDLRP01130 AC125238.2-201ENST00000430003 1440 ntBASIC5.97□□□□□ -1.45
LDLRP01130 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC5.97□□□□□ -1.45
LDLRP01130 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
LDLRP01130 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
LDLRP01130 TET1P1-201ENST00000426627 2301 ntBASIC5.97□□□□□ -1.45
LDLRP01130 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC5.97□□□□□ -1.45
LDLRP01130 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC5.96□□□□□ -1.45
LDLRP01130 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
LDLRP01130 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.45
LDLRP01130 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
LDLRP01130 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
LDLRP01130 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
LDLRP01130 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
LDLRP01130 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
LDLRP01130 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC5.96□□□□□ -1.46
LDLRP01130 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
LDLRP01130 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
LDLRP01130 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC5.96□□□□□ -1.46
LDLRP01130 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC5.96□□□□□ -1.46
LDLRP01130 RPL11P4-201ENST00000332269 436 ntBASIC5.96□□□□□ -1.46
LDLRP01130 VTRNA3-1P-201ENST00000362552 102 ntBASIC5.96□□□□□ -1.46
LDLRP01130 RNU1-84P-201ENST00000365447 164 ntBASIC5.96□□□□□ -1.46
LDLRP01130 RNU11-6P-201ENST00000391127 133 ntBASIC5.96□□□□□ -1.46
LDLRP01130 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
LDLRP01130 RANP6-201ENST00000413691 644 ntBASIC5.96□□□□□ -1.46
LDLRP01130 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC5.96□□□□□ -1.46
LDLRP01130 AL929472.1-201ENST00000417484 429 ntBASIC5.96□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 66.9 ms