Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 AAK1-203ENST00000409085 11345 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
FOXN3O00409 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
FOXN3O00409 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
FOXN3O00409 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC6.67□□□□□ -1.34
FOXN3O00409 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
FOXN3O00409 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC6.67□□□□□ -1.34
FOXN3O00409 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
FOXN3O00409 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC6.67□□□□□ -1.34
FOXN3O00409 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC6.66□□□□□ -1.34
FOXN3O00409 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC6.66□□□□□ -1.34
FOXN3O00409 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
FOXN3O00409 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
FOXN3O00409 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
FOXN3O00409 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC6.66□□□□□ -1.34
FOXN3O00409 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC6.66□□□□□ -1.34
FOXN3O00409 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC6.66□□□□□ -1.34
FOXN3O00409 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC6.66□□□□□ -1.34
FOXN3O00409 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC6.66□□□□□ -1.34
FOXN3O00409 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC6.66□□□□□ -1.34
FOXN3O00409 AL139352.1-201ENST00000255183 1001 ntTSL 2 BASIC6.66□□□□□ -1.34
FOXN3O00409 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
FOXN3O00409 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC6.66□□□□□ -1.34
FOXN3O00409 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
FOXN3O00409 AL451142.1-201ENST00000375867 775 ntBASIC6.66□□□□□ -1.34
FOXN3O00409 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC6.66□□□□□ -1.34
FOXN3O00409 CDY17P-201ENST00000414121 1282 ntBASIC6.66□□□□□ -1.34
FOXN3O00409 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC6.66□□□□□ -1.34
FOXN3O00409 CDY8P-201ENST00000428380 1279 ntBASIC6.66□□□□□ -1.34
FOXN3O00409 BMP6P1-201ENST00000431230 679 ntBASIC6.66□□□□□ -1.34
FOXN3O00409 AC094019.1-201ENST00000434678 472 ntBASIC6.66□□□□□ -1.34
FOXN3O00409 PPIAP10-201ENST00000438675 458 ntBASIC6.66□□□□□ -1.34
FOXN3O00409 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC6.66□□□□□ -1.34
FOXN3O00409 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
FOXN3O00409 AC245291.3-201ENST00000443400 292 ntBASIC6.66□□□□□ -1.34
FOXN3O00409 GAPDHP23-201ENST00000444823 993 ntBASIC6.66□□□□□ -1.34
FOXN3O00409 CDY20P-201ENST00000447528 1279 ntBASIC6.66□□□□□ -1.34
FOXN3O00409 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
FOXN3O00409 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC6.66□□□□□ -1.34
FOXN3O00409 AC112187.1-201ENST00000455837 479 ntBASIC6.66□□□□□ -1.34
FOXN3O00409 SLC25A51P1-201ENST00000468432 871 ntBASIC6.66□□□□□ -1.34
FOXN3O00409 AC012123.2-201ENST00000485809 248 ntBASIC6.66□□□□□ -1.34
FOXN3O00409 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC6.66□□□□□ -1.34
FOXN3O00409 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC6.66□□□□□ -1.34
FOXN3O00409 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC6.66□□□□□ -1.34
FOXN3O00409 AC138517.1-201ENST00000515724 568 ntBASIC6.66□□□□□ -1.34
FOXN3O00409 AC067904.2-201ENST00000517322 1283 ntBASIC6.66□□□□□ -1.34
FOXN3O00409 TPT1-AS1-209ENST00000520585 818 ntTSL 5 BASIC6.66□□□□□ -1.34
FOXN3O00409 OR6M2P-201ENST00000529831 871 ntBASIC6.66□□□□□ -1.34
FOXN3O00409 AC092451.2-201ENST00000538746 658 ntBASIC6.66□□□□□ -1.34
FOXN3O00409 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC6.66□□□□□ -1.34
FOXN3O00409 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC6.66□□□□□ -1.34
FOXN3O00409 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC6.66□□□□□ -1.34
FOXN3O00409 AC016839.1-201ENST00000578162 867 ntBASIC6.66□□□□□ -1.34
FOXN3O00409 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC6.66□□□□□ -1.34
FOXN3O00409 AP001496.3-201ENST00000580230 913 ntBASIC6.66□□□□□ -1.34
FOXN3O00409 DYNLL1P1-201ENST00000595442 269 ntBASIC6.66□□□□□ -1.34
FOXN3O00409 QTRT1P1-201ENST00000604344 1078 ntBASIC6.66□□□□□ -1.34
FOXN3O00409 PPATP2-201ENST00000605635 508 ntBASIC6.66□□□□□ -1.34
FOXN3O00409 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC6.66□□□□□ -1.34
FOXN3O00409 AC022106.1-201ENST00000612834 766 ntBASIC6.66□□□□□ -1.34
FOXN3O00409 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC6.66□□□□□ -1.34
FOXN3O00409 MIR6823-201ENST00000622118 61 ntBASIC6.66□□□□□ -1.34
FOXN3O00409 AP006248.3-201ENST00000623580 594 ntBASIC6.66□□□□□ -1.34
FOXN3O00409 AL162377.2-201ENST00000624532 337 ntBASIC6.66□□□□□ -1.34
FOXN3O00409 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
FOXN3O00409 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC6.66□□□□□ -1.34
FOXN3O00409 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC6.66□□□□□ -1.34
FOXN3O00409 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC6.66□□□□□ -1.34
FOXN3O00409 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
FOXN3O00409 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
FOXN3O00409 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC6.66□□□□□ -1.34
FOXN3O00409 OFD1P15Y-201ENST00000411536 1392 ntBASIC6.66□□□□□ -1.34
FOXN3O00409 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC6.66□□□□□ -1.34
FOXN3O00409 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC6.66□□□□□ -1.34
FOXN3O00409 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
FOXN3O00409 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
FOXN3O00409 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
FOXN3O00409 AL592494.2-201ENST00000425455 1548 ntBASIC6.66□□□□□ -1.34
FOXN3O00409 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
FOXN3O00409 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC6.65□□□□□ -1.34
FOXN3O00409 HOXD8-202ENST00000429017 1608 ntTSL 2 BASIC6.65□□□□□ -1.34
FOXN3O00409 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC6.65□□□□□ -1.34
FOXN3O00409 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC6.65□□□□□ -1.34
FOXN3O00409 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
FOXN3O00409 AL355377.1-201ENST00000621125 1653 ntBASIC6.65□□□□□ -1.34
FOXN3O00409 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC6.65□□□□□ -1.34
FOXN3O00409 AC068769.1-201ENST00000474767 2426 ntBASIC6.65□□□□□ -1.34
FOXN3O00409 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC6.65□□□□□ -1.34
FOXN3O00409 RNA5SP346-201ENST00000363541 121 ntBASIC6.65□□□□□ -1.34
FOXN3O00409 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC6.65□□□□□ -1.34
FOXN3O00409 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC6.65□□□□□ -1.34
FOXN3O00409 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
FOXN3O00409 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC6.65□□□□□ -1.34
FOXN3O00409 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
FOXN3O00409 CBX1P3-201ENST00000413296 527 ntBASIC6.65□□□□□ -1.34
FOXN3O00409 LINC01058-201ENST00000420694 448 ntTSL 5 BASIC6.65□□□□□ -1.34
FOXN3O00409 AC073464.3-201ENST00000422564 712 ntBASIC6.65□□□□□ -1.34
FOXN3O00409 AC013410.2-201ENST00000422627 201 ntBASIC6.65□□□□□ -1.34
FOXN3O00409 LINC01728-201ENST00000428529 524 ntTSL 2 BASIC6.65□□□□□ -1.34
FOXN3O00409 UBE2V1P6-201ENST00000430840 422 ntBASIC6.65□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 97.3 ms