Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
SLC28A1O00337 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC5.76□□□□□ -1.49
SLC28A1O00337 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
SLC28A1O00337 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC5.76□□□□□ -1.49
SLC28A1O00337 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC5.76□□□□□ -1.49
SLC28A1O00337 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC5.76□□□□□ -1.49
SLC28A1O00337 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC5.76□□□□□ -1.49
SLC28A1O00337 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
SLC28A1O00337 SNORA21-201ENST00000362423 132 ntBASIC5.76□□□□□ -1.49
SLC28A1O00337 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
SLC28A1O00337 CLHC1-204ENST00000407122 2139 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
SLC28A1O00337 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC5.76□□□□□ -1.49
SLC28A1O00337 UBQLN1P1-207ENST00000441056 1169 ntBASIC5.76□□□□□ -1.49
SLC28A1O00337 RPSAP40-201ENST00000442343 891 ntBASIC5.76□□□□□ -1.49
SLC28A1O00337 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC5.76□□□□□ -1.49
SLC28A1O00337 AL603882.1-201ENST00000463059 681 ntBASIC5.76□□□□□ -1.49
SLC28A1O00337 RPS7P10-201ENST00000464254 603 ntBASIC5.76□□□□□ -1.49
SLC28A1O00337 H3F3AP5-201ENST00000475267 429 ntBASIC5.76□□□□□ -1.49
SLC28A1O00337 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC5.76□□□□□ -1.49
SLC28A1O00337 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC5.76□□□□□ -1.49
SLC28A1O00337 ST13P12-201ENST00000508958 1094 ntBASIC5.76□□□□□ -1.49
SLC28A1O00337 AK6-204ENST00000512561 587 ntTSL 5 BASIC5.76□□□□□ -1.49
SLC28A1O00337 AC025766.1-201ENST00000514061 409 ntTSL 5 BASIC5.76□□□□□ -1.49
SLC28A1O00337 AC138517.1-201ENST00000515724 568 ntBASIC5.76□□□□□ -1.49
SLC28A1O00337 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
SLC28A1O00337 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC5.76□□□□□ -1.49
SLC28A1O00337 AL137224.1-201ENST00000527984 389 ntTSL 2 BASIC5.76□□□□□ -1.49
SLC28A1O00337 OR4A42P-201ENST00000531397 938 ntBASIC5.76□□□□□ -1.49
SLC28A1O00337 NPIPB14P-203ENST00000532298 987 ntBASIC5.76□□□□□ -1.49
SLC28A1O00337 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC5.76□□□□□ -1.49
SLC28A1O00337 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC5.76□□□□□ -1.49
SLC28A1O00337 AC013652.2-202ENST00000558948 910 ntTSL 3 BASIC5.76□□□□□ -1.49
SLC28A1O00337 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC5.76□□□□□ -1.49
SLC28A1O00337 AL163952.1-202ENST00000569625 600 ntBASIC5.76□□□□□ -1.49
SLC28A1O00337 TTC39C-AS1-201ENST00000579713 817 ntTSL 5 BASIC5.76□□□□□ -1.49
SLC28A1O00337 AL161457.2-206ENST00000592778 802 ntTSL 5 BASIC5.76□□□□□ -1.49
SLC28A1O00337 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC5.76□□□□□ -1.49
SLC28A1O00337 AL353684.1-201ENST00000622677 1120 ntBASIC5.76□□□□□ -1.49
SLC28A1O00337 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC5.76□□□□□ -1.49
SLC28A1O00337 AC000095.2-202ENST00000637415 154 ntBASIC5.76□□□□□ -1.49
SLC28A1O00337 AC010325.3-201ENST00000641084 394 ntBASIC5.76□□□□□ -1.49
SLC28A1O00337 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC5.76□□□□□ -1.49
SLC28A1O00337 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
SLC28A1O00337 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
SLC28A1O00337 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC5.76□□□□□ -1.49
SLC28A1O00337 AL359955.1-201ENST00000455242 3275 ntBASIC5.76□□□□□ -1.49
SLC28A1O00337 ICE2P1-201ENST00000512800 1849 ntBASIC5.76□□□□□ -1.49
SLC28A1O00337 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC5.75□□□□□ -1.49
SLC28A1O00337 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
SLC28A1O00337 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
SLC28A1O00337 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
SLC28A1O00337 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
SLC28A1O00337 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
SLC28A1O00337 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC5.75□□□□□ -1.49
SLC28A1O00337 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
SLC28A1O00337 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
SLC28A1O00337 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
SLC28A1O00337 RNA5SP211-201ENST00000365516 117 ntBASIC5.75□□□□□ -1.49
SLC28A1O00337 AL132875.1-201ENST00000403623 949 ntBASIC5.75□□□□□ -1.49
SLC28A1O00337 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC5.75□□□□□ -1.49
SLC28A1O00337 AC004012.1-201ENST00000416593 534 ntTSL 4 BASIC5.75□□□□□ -1.49
SLC28A1O00337 AC130360.1-201ENST00000425489 1117 ntBASIC5.75□□□□□ -1.49
SLC28A1O00337 AC104463.2-201ENST00000428573 314 ntTSL 5 BASIC5.75□□□□□ -1.49
SLC28A1O00337 TRIM60P16-201ENST00000444048 694 ntBASIC5.75□□□□□ -1.49
SLC28A1O00337 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC5.75□□□□□ -1.49
SLC28A1O00337 AC104164.1-201ENST00000460282 590 ntBASIC5.75□□□□□ -1.49
SLC28A1O00337 PFN1P6-201ENST00000476786 399 ntBASIC5.75□□□□□ -1.49
SLC28A1O00337 NR1I3-229ENST00000511748 480 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
SLC28A1O00337 SETP21-201ENST00000514799 892 ntBASIC5.75□□□□□ -1.49
SLC28A1O00337 RNU4-18P-201ENST00000516751 149 ntBASIC5.75□□□□□ -1.49
SLC28A1O00337 RNU6-943P-201ENST00000516960 98 ntBASIC5.75□□□□□ -1.49
SLC28A1O00337 AC078899.1-201ENST00000521432 1185 ntBASIC5.75□□□□□ -1.49
SLC28A1O00337 KCTD9P6-201ENST00000522306 950 ntBASIC5.75□□□□□ -1.49
SLC28A1O00337 AC130365.2-201ENST00000525882 1201 ntBASIC5.75□□□□□ -1.49
SLC28A1O00337 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC5.75□□□□□ -1.49
SLC28A1O00337 AC135626.1-201ENST00000556983 435 ntBASIC5.75□□□□□ -1.49
SLC28A1O00337 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC5.75□□□□□ -1.49
SLC28A1O00337 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
SLC28A1O00337 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC5.75□□□□□ -1.49
SLC28A1O00337 AP001357.1-201ENST00000586304 1053 ntBASIC5.75□□□□□ -1.49
SLC28A1O00337 AC060780.2-201ENST00000589047 198 ntBASIC5.75□□□□□ -1.49
SLC28A1O00337 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC5.75□□□□□ -1.49
SLC28A1O00337 RFPL4AP6-201ENST00000616792 846 ntBASIC5.75□□□□□ -1.49
SLC28A1O00337 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC5.75□□□□□ -1.49
SLC28A1O00337 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
SLC28A1O00337 SEMA5A-AS1-201ENST00000510879 1679 ntTSL 2 BASIC5.75□□□□□ -1.49
SLC28A1O00337 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC5.75□□□□□ -1.49
SLC28A1O00337 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
SLC28A1O00337 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
SLC28A1O00337 AC119674.1-202ENST00000641333 1860 ntBASIC5.75□□□□□ -1.49
SLC28A1O00337 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC5.74□□□□□ -1.49
SLC28A1O00337 AL158152.1-201ENST00000602652 1435 ntBASIC5.74□□□□□ -1.49
SLC28A1O00337 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SLC28A1O00337 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SLC28A1O00337 HOXD8-202ENST00000429017 1608 ntTSL 2 BASIC5.74□□□□□ -1.49
SLC28A1O00337 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SLC28A1O00337 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SLC28A1O00337 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
SLC28A1O00337 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
SLC28A1O00337 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC5.74□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 68.1 ms