Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
UPK1AO00322 RNA5SP232-201ENST00000364144 119 ntBASIC5.6□□□□□ -1.51
UPK1AO00322 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
UPK1AO00322 GAS5-202ENST00000414075 413 ntTSL 2 BASIC5.6□□□□□ -1.51
UPK1AO00322 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC5.6□□□□□ -1.51
UPK1AO00322 AL354893.1-201ENST00000433735 348 ntBASIC5.6□□□□□ -1.51
UPK1AO00322 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
UPK1AO00322 TRGC2-201ENST00000436911 1013 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
UPK1AO00322 AC097463.1-201ENST00000447288 481 ntBASIC5.6□□□□□ -1.51
UPK1AO00322 EEF1B2P3-201ENST00000447718 678 ntBASIC5.6□□□□□ -1.51
UPK1AO00322 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC5.6□□□□□ -1.51
UPK1AO00322 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
UPK1AO00322 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC5.6□□□□□ -1.51
UPK1AO00322 HSD3BP3-201ENST00000514706 994 ntBASIC5.6□□□□□ -1.51
UPK1AO00322 RN7SKP288-201ENST00000516227 268 ntBASIC5.6□□□□□ -1.51
UPK1AO00322 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC5.6□□□□□ -1.51
UPK1AO00322 AC009879.1-201ENST00000520029 839 ntBASIC5.6□□□□□ -1.51
UPK1AO00322 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC5.6□□□□□ -1.51
UPK1AO00322 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
UPK1AO00322 TPPP2-208ENST00000530140 703 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
UPK1AO00322 LDHC-203ENST00000535809 757 ntTSL 5 BASIC5.6□□□□□ -1.51
UPK1AO00322 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC5.6□□□□□ -1.51
UPK1AO00322 AC092332.1-201ENST00000563684 829 ntBASIC5.6□□□□□ -1.51
UPK1AO00322 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC5.6□□□□□ -1.51
UPK1AO00322 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC5.6□□□□□ -1.51
UPK1AO00322 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC5.6□□□□□ -1.51
UPK1AO00322 MIR6889-201ENST00000613185 59 ntBASIC5.6□□□□□ -1.51
UPK1AO00322 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC5.6□□□□□ -1.51
UPK1AO00322 AC244100.4-201ENST00000617747 388 ntBASIC5.6□□□□□ -1.51
UPK1AO00322 AC007998.4-201ENST00000612496 2533 ntBASIC5.6□□□□□ -1.51
UPK1AO00322 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC5.6□□□□□ -1.51
UPK1AO00322 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC5.6□□□□□ -1.51
UPK1AO00322 THAP12P9-201ENST00000503971 2360 ntBASIC5.6□□□□□ -1.51
UPK1AO00322 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC5.6□□□□□ -1.51
UPK1AO00322 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
UPK1AO00322 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
UPK1AO00322 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
UPK1AO00322 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
UPK1AO00322 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
UPK1AO00322 DMD-228ENST00000541735 7080 ntTSL 5 BASIC5.6□□□□□ -1.51
UPK1AO00322 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
UPK1AO00322 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
UPK1AO00322 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC5.59□□□□□ -1.51
UPK1AO00322 HSPD1P9-201ENST00000420325 1636 ntBASIC5.59□□□□□ -1.51
UPK1AO00322 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
UPK1AO00322 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC5.59□□□□□ -1.51
UPK1AO00322 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.59□□□□□ -1.51
UPK1AO00322 AL158152.1-201ENST00000602652 1435 ntBASIC5.59□□□□□ -1.51
UPK1AO00322 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC5.59□□□□□ -1.51
UPK1AO00322 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
UPK1AO00322 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
UPK1AO00322 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
UPK1AO00322 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
UPK1AO00322 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
UPK1AO00322 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
UPK1AO00322 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
UPK1AO00322 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
UPK1AO00322 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
UPK1AO00322 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC5.59□□□□□ -1.51
UPK1AO00322 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC5.59□□□□□ -1.51
UPK1AO00322 MIR133A2-201ENST00000347538 102 ntBASIC5.59□□□□□ -1.51
UPK1AO00322 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
UPK1AO00322 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC5.59□□□□□ -1.51
UPK1AO00322 RN7SKP279-201ENST00000411383 298 ntBASIC5.59□□□□□ -1.51
UPK1AO00322 NME1P1-201ENST00000420914 382 ntBASIC5.59□□□□□ -1.51
UPK1AO00322 PLA2G12AP2-201ENST00000424744 264 ntBASIC5.59□□□□□ -1.51
UPK1AO00322 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC5.59□□□□□ -1.51
UPK1AO00322 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC5.59□□□□□ -1.51
UPK1AO00322 RPS23P9-201ENST00000448848 438 ntBASIC5.59□□□□□ -1.51
UPK1AO00322 AC104164.1-201ENST00000460282 590 ntBASIC5.59□□□□□ -1.51
UPK1AO00322 AC021006.1-201ENST00000489849 553 ntBASIC5.59□□□□□ -1.51
UPK1AO00322 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC5.59□□□□□ -1.51
UPK1AO00322 RN7SKP35-201ENST00000517210 151 ntBASIC5.59□□□□□ -1.51
UPK1AO00322 AC110056.1-201ENST00000525759 911 ntBASIC5.59□□□□□ -1.51
UPK1AO00322 OR8Q1P-201ENST00000526467 655 ntBASIC5.59□□□□□ -1.51
UPK1AO00322 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC5.59□□□□□ -1.51
UPK1AO00322 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC5.59□□□□□ -1.51
UPK1AO00322 ASB8-203ENST00000535988 679 ntTSL 2 BASIC5.59□□□□□ -1.51
UPK1AO00322 ZNF322P1-201ENST00000568013 1209 ntBASIC5.59□□□□□ -1.51
UPK1AO00322 MIR3154-201ENST00000577829 84 ntBASIC5.59□□□□□ -1.51
UPK1AO00322 MIR4502-201ENST00000580432 81 ntBASIC5.59□□□□□ -1.51
UPK1AO00322 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC5.59□□□□□ -1.51
UPK1AO00322 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
UPK1AO00322 AC015726.1-202ENST00000602532 475 ntTSL 5 BASIC5.59□□□□□ -1.51
UPK1AO00322 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC5.59□□□□□ -1.51
UPK1AO00322 AL359091.2-201ENST00000609303 556 ntBASIC5.59□□□□□ -1.51
UPK1AO00322 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC5.59□□□□□ -1.51
UPK1AO00322 AC015712.7-201ENST00000615211 635 ntBASIC5.59□□□□□ -1.51
UPK1AO00322 AC009120.7-201ENST00000623452 780 ntBASIC5.59□□□□□ -1.51
UPK1AO00322 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
UPK1AO00322 CASC19-274ENST00000642018 970 ntBASIC5.59□□□□□ -1.51
UPK1AO00322 AC008627.1-201ENST00000517511 1704 ntBASIC5.59□□□□□ -1.51
UPK1AO00322 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC5.59□□□□□ -1.51
UPK1AO00322 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
UPK1AO00322 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC5.59□□□□□ -1.51
UPK1AO00322 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.52
UPK1AO00322 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.52
UPK1AO00322 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
UPK1AO00322 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC5.59□□□□□ -1.52
UPK1AO00322 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 109 ms