Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 AC092681.3-201ENST00000609463 678 ntBASIC5.74□□□□□ -1.49
ATG4BQ9Y4P1 Xist_exon4.1-201ENST00000615964 126 ntBASIC5.74□□□□□ -1.49
ATG4BQ9Y4P1 AC096861.1-201ENST00000616652 240 ntBASIC5.74□□□□□ -1.49
ATG4BQ9Y4P1 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC5.74□□□□□ -1.49
ATG4BQ9Y4P1 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC5.74□□□□□ -1.49
ATG4BQ9Y4P1 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC5.74□□□□□ -1.49
ATG4BQ9Y4P1 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
ATG4BQ9Y4P1 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
ATG4BQ9Y4P1 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC5.74□□□□□ -1.49
ATG4BQ9Y4P1 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
ATG4BQ9Y4P1 MAPK10-261ENST00000641050 3109 ntBASIC5.74□□□□□ -1.49
ATG4BQ9Y4P1 AC068769.1-201ENST00000474767 2426 ntBASIC5.74□□□□□ -1.49
ATG4BQ9Y4P1 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
ATG4BQ9Y4P1 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
ATG4BQ9Y4P1 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
ATG4BQ9Y4P1 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
ATG4BQ9Y4P1 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC5.73□□□□□ -1.49
ATG4BQ9Y4P1 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC5.73□□□□□ -1.49
ATG4BQ9Y4P1 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
ATG4BQ9Y4P1 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
ATG4BQ9Y4P1 BRAFP1-201ENST00000445336 2703 ntBASIC5.73□□□□□ -1.49
ATG4BQ9Y4P1 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
ATG4BQ9Y4P1 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC5.73□□□□□ -1.49
ATG4BQ9Y4P1 AC104966.1-201ENST00000467010 1464 ntBASIC5.73□□□□□ -1.49
ATG4BQ9Y4P1 RBMY1HP-201ENST00000382759 1389 ntBASIC5.73□□□□□ -1.49
ATG4BQ9Y4P1 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
ATG4BQ9Y4P1 AL121835.1-201ENST00000404250 354 ntBASIC5.73□□□□□ -1.49
ATG4BQ9Y4P1 SNORA77.2-201ENST00000408571 112 ntBASIC5.73□□□□□ -1.49
ATG4BQ9Y4P1 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC5.73□□□□□ -1.49
ATG4BQ9Y4P1 KATNBL1P2-201ENST00000433311 835 ntBASIC5.73□□□□□ -1.49
ATG4BQ9Y4P1 AL353662.1-201ENST00000439099 327 ntBASIC5.73□□□□□ -1.49
ATG4BQ9Y4P1 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC5.73□□□□□ -1.49
ATG4BQ9Y4P1 RPL5P10-201ENST00000445207 894 ntBASIC5.73□□□□□ -1.49
ATG4BQ9Y4P1 FTLP8-201ENST00000446770 267 ntBASIC5.73□□□□□ -1.49
ATG4BQ9Y4P1 Z83838.1-202ENST00000456225 839 ntBASIC5.73□□□□□ -1.49
ATG4BQ9Y4P1 AC124945.1-201ENST00000485133 188 ntBASIC5.73□□□□□ -1.49
ATG4BQ9Y4P1 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC5.73□□□□□ -1.49
ATG4BQ9Y4P1 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC5.73□□□□□ -1.49
ATG4BQ9Y4P1 RN7SKP5-201ENST00000517045 272 ntBASIC5.73□□□□□ -1.49
ATG4BQ9Y4P1 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC5.73□□□□□ -1.49
ATG4BQ9Y4P1 AC009879.1-201ENST00000520029 839 ntBASIC5.73□□□□□ -1.49
ATG4BQ9Y4P1 AC008429.4-201ENST00000521201 182 ntBASIC5.73□□□□□ -1.49
ATG4BQ9Y4P1 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC5.73□□□□□ -1.49
ATG4BQ9Y4P1 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC5.73□□□□□ -1.49
ATG4BQ9Y4P1 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC5.73□□□□□ -1.49
ATG4BQ9Y4P1 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC5.73□□□□□ -1.49
ATG4BQ9Y4P1 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC5.73□□□□□ -1.49
ATG4BQ9Y4P1 TEX41-218ENST00000596540 882 ntTSL 5 BASIC5.73□□□□□ -1.49
ATG4BQ9Y4P1 FAM27E2-201ENST00000619668 403 ntBASIC5.73□□□□□ -1.49
ATG4BQ9Y4P1 AL357562.1-201ENST00000624911 609 ntBASIC5.73□□□□□ -1.49
ATG4BQ9Y4P1 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC5.73□□□□□ -1.49
ATG4BQ9Y4P1 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
ATG4BQ9Y4P1 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
ATG4BQ9Y4P1 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
ATG4BQ9Y4P1 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
ATG4BQ9Y4P1 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
ATG4BQ9Y4P1 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC5.73□□□□□ -1.49
ATG4BQ9Y4P1 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC5.73□□□□□ -1.49
ATG4BQ9Y4P1 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC5.73□□□□□ -1.49
ATG4BQ9Y4P1 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
ATG4BQ9Y4P1 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC5.73□□□□□ -1.49
ATG4BQ9Y4P1 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC5.73□□□□□ -1.49
ATG4BQ9Y4P1 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
ATG4BQ9Y4P1 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
ATG4BQ9Y4P1 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC5.72□□□□□ -1.49
ATG4BQ9Y4P1 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
ATG4BQ9Y4P1 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
ATG4BQ9Y4P1 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC5.72□□□□□ -1.49
ATG4BQ9Y4P1 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
ATG4BQ9Y4P1 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC5.72□□□□□ -1.49
ATG4BQ9Y4P1 NCOA4P2-201ENST00000340589 1813 ntBASIC5.72□□□□□ -1.49
ATG4BQ9Y4P1 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
ATG4BQ9Y4P1 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC5.72□□□□□ -1.49
ATG4BQ9Y4P1 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC5.72□□□□□ -1.49
ATG4BQ9Y4P1 OR7E156P-201ENST00000400303 464 ntBASIC5.72□□□□□ -1.49
ATG4BQ9Y4P1 RPA3-204ENST00000406109 434 ntTSL 3 BASIC5.72□□□□□ -1.49
ATG4BQ9Y4P1 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC5.72□□□□□ -1.49
ATG4BQ9Y4P1 XIST-201ENST00000416330 750 ntTSL 2 BASIC5.72□□□□□ -1.49
ATG4BQ9Y4P1 AL356476.1-201ENST00000421481 480 ntTSL 5 BASIC5.72□□□□□ -1.49
ATG4BQ9Y4P1 RPL12P12-201ENST00000424633 501 ntBASIC5.72□□□□□ -1.49
ATG4BQ9Y4P1 AC002069.1-201ENST00000429649 1159 ntBASIC5.72□□□□□ -1.49
ATG4BQ9Y4P1 AC069154.1-201ENST00000432914 542 ntBASIC5.72□□□□□ -1.49
ATG4BQ9Y4P1 AC016027.4-201ENST00000450866 277 ntBASIC5.72□□□□□ -1.49
ATG4BQ9Y4P1 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
ATG4BQ9Y4P1 RPL23AP40-201ENST00000487630 390 ntBASIC5.72□□□□□ -1.49
ATG4BQ9Y4P1 CCDC11P1-201ENST00000503137 1162 ntBASIC5.72□□□□□ -1.49
ATG4BQ9Y4P1 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC5.72□□□□□ -1.49
ATG4BQ9Y4P1 RN7SKP35-201ENST00000517210 151 ntBASIC5.72□□□□□ -1.49
ATG4BQ9Y4P1 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
ATG4BQ9Y4P1 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC5.72□□□□□ -1.49
ATG4BQ9Y4P1 IGHVII-60-1-201ENST00000519079 256 ntBASIC5.72□□□□□ -1.49
ATG4BQ9Y4P1 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC5.72□□□□□ -1.49
ATG4BQ9Y4P1 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC5.72□□□□□ -1.49
ATG4BQ9Y4P1 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC5.72□□□□□ -1.49
ATG4BQ9Y4P1 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC5.72□□□□□ -1.49
ATG4BQ9Y4P1 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC5.72□□□□□ -1.49
ATG4BQ9Y4P1 STARD6-202ENST00000577499 696 ntTSL 2 BASIC5.72□□□□□ -1.49
ATG4BQ9Y4P1 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC5.72□□□□□ -1.49
ATG4BQ9Y4P1 AC119403.2-201ENST00000590960 598 ntBASIC5.72□□□□□ -1.49
ATG4BQ9Y4P1 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC5.72□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 121 ms