Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 RN7SL221P-201ENST00000466190 281 ntBASIC7.16□□□□□ -1.26
CLIP2Q9UDT6 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
CLIP2Q9UDT6 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC7.16□□□□□ -1.26
CLIP2Q9UDT6 UGT2A3P7-201ENST00000510485 734 ntBASIC7.16□□□□□ -1.26
CLIP2Q9UDT6 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC7.16□□□□□ -1.26
CLIP2Q9UDT6 DPPA3P2-202ENST00000557188 1219 ntBASIC7.16□□□□□ -1.26
CLIP2Q9UDT6 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC7.16□□□□□ -1.26
CLIP2Q9UDT6 PSMA4-209ENST00000559082 1094 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
CLIP2Q9UDT6 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC7.16□□□□□ -1.26
CLIP2Q9UDT6 AL136228.1-201ENST00000622221 319 ntBASIC7.16□□□□□ -1.26
CLIP2Q9UDT6 SNX18P12-201ENST00000624821 759 ntBASIC7.16□□□□□ -1.26
CLIP2Q9UDT6 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC7.16□□□□□ -1.26
CLIP2Q9UDT6 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC7.16□□□□□ -1.26
CLIP2Q9UDT6 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC7.16□□□□□ -1.26
CLIP2Q9UDT6 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
CLIP2Q9UDT6 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC7.16□□□□□ -1.26
CLIP2Q9UDT6 DCN-218ENST00000551354 2924 ntTSL 3 BASIC7.16□□□□□ -1.26
CLIP2Q9UDT6 ATP5A1P4-201ENST00000556888 1605 ntBASIC7.16□□□□□ -1.26
CLIP2Q9UDT6 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC7.16□□□□□ -1.26
CLIP2Q9UDT6 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
CLIP2Q9UDT6 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.26
CLIP2Q9UDT6 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC7.15□□□□□ -1.26
CLIP2Q9UDT6 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
CLIP2Q9UDT6 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC7.15□□□□□ -1.26
CLIP2Q9UDT6 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC7.15□□□□□ -1.26
CLIP2Q9UDT6 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
CLIP2Q9UDT6 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
CLIP2Q9UDT6 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
CLIP2Q9UDT6 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC7.15□□□□□ -1.26
CLIP2Q9UDT6 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
CLIP2Q9UDT6 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
CLIP2Q9UDT6 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
CLIP2Q9UDT6 AL096711.1-201ENST00000404780 554 ntBASIC7.15□□□□□ -1.26
CLIP2Q9UDT6 SLC20A1P1-201ENST00000413906 956 ntBASIC7.15□□□□□ -1.26
CLIP2Q9UDT6 AL158850.1-201ENST00000441249 914 ntTSL 3 BASIC7.15□□□□□ -1.26
CLIP2Q9UDT6 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC7.15□□□□□ -1.26
CLIP2Q9UDT6 AL022319.1-201ENST00000458183 1167 ntBASIC7.15□□□□□ -1.26
CLIP2Q9UDT6 AL355032.1-201ENST00000472981 438 ntBASIC7.15□□□□□ -1.26
CLIP2Q9UDT6 AC114728.1-201ENST00000488289 483 ntBASIC7.15□□□□□ -1.26
CLIP2Q9UDT6 Y_RNA.667-201ENST00000516212 107 ntBASIC7.15□□□□□ -1.26
CLIP2Q9UDT6 RNA5SP438-201ENST00000516561 112 ntBASIC7.15□□□□□ -1.26
CLIP2Q9UDT6 IGHVIII-47-1-201ENST00000518187 331 ntBASIC7.15□□□□□ -1.26
CLIP2Q9UDT6 AC060775.1-201ENST00000518241 520 ntBASIC7.15□□□□□ -1.26
CLIP2Q9UDT6 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC7.15□□□□□ -1.26
CLIP2Q9UDT6 CETN3-206ENST00000522864 738 ntTSL 3 BASIC7.15□□□□□ -1.26
CLIP2Q9UDT6 AC068305.2-201ENST00000550567 1205 ntBASIC7.15□□□□□ -1.26
CLIP2Q9UDT6 HNRNPCP1-201ENST00000556181 766 ntBASIC7.15□□□□□ -1.26
CLIP2Q9UDT6 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
CLIP2Q9UDT6 MIR4420-201ENST00000583944 77 ntBASIC7.15□□□□□ -1.26
CLIP2Q9UDT6 AC090236.2-201ENST00000587933 1101 ntBASIC7.15□□□□□ -1.26
CLIP2Q9UDT6 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC7.15□□□□□ -1.26
CLIP2Q9UDT6 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC7.15□□□□□ -1.26
CLIP2Q9UDT6 AL009031.1-202ENST00000632370 886 ntTSL 3 BASIC7.15□□□□□ -1.26
CLIP2Q9UDT6 AC129915.3-201ENST00000634128 948 ntBASIC7.15□□□□□ -1.26
CLIP2Q9UDT6 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC7.15□□□□□ -1.26
CLIP2Q9UDT6 AL391117.1-201ENST00000640003 1186 ntTSL 5 BASIC7.15□□□□□ -1.26
CLIP2Q9UDT6 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
CLIP2Q9UDT6 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC7.15□□□□□ -1.26
CLIP2Q9UDT6 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
CLIP2Q9UDT6 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC7.15□□□□□ -1.27
CLIP2Q9UDT6 AC096921.2-201ENST00000561507 1916 ntBASIC7.15□□□□□ -1.27
CLIP2Q9UDT6 AOX3P-204ENST00000491025 2107 ntBASIC7.15□□□□□ -1.27
CLIP2Q9UDT6 NSF-206ENST00000575068 2667 ntTSL 2 BASIC7.14□□□□□ -1.27
CLIP2Q9UDT6 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC7.14□□□□□ -1.27
CLIP2Q9UDT6 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC7.14□□□□□ -1.27
CLIP2Q9UDT6 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
CLIP2Q9UDT6 TMSB4XP2-201ENST00000335179 210 ntBASIC7.14□□□□□ -1.27
CLIP2Q9UDT6 OR51B4-201ENST00000380224 933 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
CLIP2Q9UDT6 RPL23AP17-201ENST00000401064 499 ntBASIC7.14□□□□□ -1.27
CLIP2Q9UDT6 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC7.14□□□□□ -1.27
CLIP2Q9UDT6 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC7.14□□□□□ -1.27
CLIP2Q9UDT6 RPL12P12-201ENST00000424633 501 ntBASIC7.14□□□□□ -1.27
CLIP2Q9UDT6 RPS29P14-201ENST00000431518 171 ntBASIC7.14□□□□□ -1.27
CLIP2Q9UDT6 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC7.14□□□□□ -1.27
CLIP2Q9UDT6 TRIM60P16-201ENST00000444048 694 ntBASIC7.14□□□□□ -1.27
CLIP2Q9UDT6 OR13K1P-201ENST00000444577 975 ntBASIC7.14□□□□□ -1.27
CLIP2Q9UDT6 AL512593.1-201ENST00000444758 779 ntBASIC7.14□□□□□ -1.27
CLIP2Q9UDT6 AC084754.1-201ENST00000463466 464 ntBASIC7.14□□□□□ -1.27
CLIP2Q9UDT6 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC7.14□□□□□ -1.27
CLIP2Q9UDT6 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
CLIP2Q9UDT6 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC7.14□□□□□ -1.27
CLIP2Q9UDT6 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
CLIP2Q9UDT6 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC7.14□□□□□ -1.27
CLIP2Q9UDT6 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC7.14□□□□□ -1.27
CLIP2Q9UDT6 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC7.14□□□□□ -1.27
CLIP2Q9UDT6 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC7.14□□□□□ -1.27
CLIP2Q9UDT6 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC7.14□□□□□ -1.27
CLIP2Q9UDT6 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC7.14□□□□□ -1.27
CLIP2Q9UDT6 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC7.14□□□□□ -1.27
CLIP2Q9UDT6 AF287957.1-201ENST00000607368 1595 ntBASIC7.14□□□□□ -1.27
CLIP2Q9UDT6 AC096861.1-201ENST00000616652 240 ntBASIC7.14□□□□□ -1.27
CLIP2Q9UDT6 AL357562.1-201ENST00000624911 609 ntBASIC7.14□□□□□ -1.27
CLIP2Q9UDT6 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC7.14□□□□□ -1.27
CLIP2Q9UDT6 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC7.14□□□□□ -1.27
CLIP2Q9UDT6 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
CLIP2Q9UDT6 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
CLIP2Q9UDT6 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
CLIP2Q9UDT6 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
CLIP2Q9UDT6 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
CLIP2Q9UDT6 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms