Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC6.27□□□□□ -1.4
CISHQ9NSE2 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC6.27□□□□□ -1.41
CISHQ9NSE2 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
CISHQ9NSE2 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
CISHQ9NSE2 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
CISHQ9NSE2 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC6.27□□□□□ -1.41
CISHQ9NSE2 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC6.27□□□□□ -1.41
CISHQ9NSE2 SELE-204ENST00000367776 3576 ntTSL 5 BASIC6.27□□□□□ -1.41
CISHQ9NSE2 SELE-205ENST00000367777 3576 ntTSL 5 BASIC6.27□□□□□ -1.41
CISHQ9NSE2 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
CISHQ9NSE2 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
CISHQ9NSE2 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC6.27□□□□□ -1.41
CISHQ9NSE2 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
CISHQ9NSE2 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC6.27□□□□□ -1.41
CISHQ9NSE2 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
CISHQ9NSE2 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC6.27□□□□□ -1.41
CISHQ9NSE2 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.41
CISHQ9NSE2 LINC01793-201ENST00000409590 2036 ntTSL 2 BASIC6.27□□□□□ -1.41
CISHQ9NSE2 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC6.27□□□□□ -1.41
CISHQ9NSE2 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
CISHQ9NSE2 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
CISHQ9NSE2 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
CISHQ9NSE2 MIR621-201ENST00000384919 96 ntBASIC6.27□□□□□ -1.41
CISHQ9NSE2 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC6.27□□□□□ -1.41
CISHQ9NSE2 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
CISHQ9NSE2 AC073410.1-201ENST00000435125 589 ntBASIC6.27□□□□□ -1.41
CISHQ9NSE2 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
CISHQ9NSE2 PCBP2P1-201ENST00000437262 977 ntBASIC6.27□□□□□ -1.41
CISHQ9NSE2 H3F3BP1-201ENST00000440551 403 ntBASIC6.27□□□□□ -1.41
CISHQ9NSE2 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
CISHQ9NSE2 AC023141.8-201ENST00000442554 208 ntBASIC6.27□□□□□ -1.41
CISHQ9NSE2 HMGN1P2-201ENST00000445197 310 ntBASIC6.27□□□□□ -1.41
CISHQ9NSE2 GAS5-218ENST00000448718 565 ntTSL 2 BASIC6.27□□□□□ -1.41
CISHQ9NSE2 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC6.27□□□□□ -1.41
CISHQ9NSE2 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
CISHQ9NSE2 RN7SL57P-201ENST00000493687 290 ntBASIC6.27□□□□□ -1.41
CISHQ9NSE2 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
CISHQ9NSE2 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC6.27□□□□□ -1.41
CISHQ9NSE2 AC114781.3-201ENST00000512083 142 ntBASIC6.27□□□□□ -1.41
CISHQ9NSE2 snoU109.5-201ENST00000516231 132 ntBASIC6.27□□□□□ -1.41
CISHQ9NSE2 OR4A6P-201ENST00000534364 970 ntBASIC6.27□□□□□ -1.41
CISHQ9NSE2 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC6.27□□□□□ -1.41
CISHQ9NSE2 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC6.27□□□□□ -1.41
CISHQ9NSE2 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC6.27□□□□□ -1.41
CISHQ9NSE2 AL138895.2-201ENST00000603019 178 ntBASIC6.27□□□□□ -1.41
CISHQ9NSE2 AC067773.1-201ENST00000603284 1094 ntBASIC6.27□□□□□ -1.41
CISHQ9NSE2 AC108865.2-201ENST00000606881 432 ntBASIC6.27□□□□□ -1.41
CISHQ9NSE2 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC6.27□□□□□ -1.41
CISHQ9NSE2 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
CISHQ9NSE2 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC6.27□□□□□ -1.41
CISHQ9NSE2 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
CISHQ9NSE2 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
CISHQ9NSE2 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC6.27□□□□□ -1.41
CISHQ9NSE2 CCDC77-201ENST00000239830 2371 ntAPPRIS P3 TSL 2 BASIC6.26□□□□□ -1.41
CISHQ9NSE2 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC6.26□□□□□ -1.41
CISHQ9NSE2 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CISHQ9NSE2 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC6.26□□□□□ -1.41
CISHQ9NSE2 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CISHQ9NSE2 AC110716.2-201ENST00000563865 3945 ntBASIC6.26□□□□□ -1.41
CISHQ9NSE2 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CISHQ9NSE2 ZNF969P-201ENST00000510345 2341 ntBASIC6.26□□□□□ -1.41
CISHQ9NSE2 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
CISHQ9NSE2 AC073365.1-203ENST00000641055 1992 ntBASIC6.26□□□□□ -1.41
CISHQ9NSE2 RNU1-150P-201ENST00000362491 162 ntBASIC6.26□□□□□ -1.41
CISHQ9NSE2 RNA5SP500-201ENST00000364486 119 ntBASIC6.26□□□□□ -1.41
CISHQ9NSE2 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
CISHQ9NSE2 MIR1203-201ENST00000408812 85 ntBASIC6.26□□□□□ -1.41
CISHQ9NSE2 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC6.26□□□□□ -1.41
CISHQ9NSE2 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC6.26□□□□□ -1.41
CISHQ9NSE2 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC6.26□□□□□ -1.41
CISHQ9NSE2 HLA-DPA3-207ENST00000454398 229 ntBASIC6.26□□□□□ -1.41
CISHQ9NSE2 AC093166.4-201ENST00000457867 318 ntBASIC6.26□□□□□ -1.41
CISHQ9NSE2 RN7SKP67-201ENST00000515905 235 ntBASIC6.26□□□□□ -1.41
CISHQ9NSE2 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC6.26□□□□□ -1.41
CISHQ9NSE2 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC6.26□□□□□ -1.41
CISHQ9NSE2 AC018558.5-201ENST00000565840 952 ntBASIC6.26□□□□□ -1.41
CISHQ9NSE2 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC6.26□□□□□ -1.41
CISHQ9NSE2 AC006115.2-201ENST00000596823 202 ntBASIC6.26□□□□□ -1.41
CISHQ9NSE2 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC6.26□□□□□ -1.41
CISHQ9NSE2 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC6.26□□□□□ -1.41
CISHQ9NSE2 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC6.26□□□□□ -1.41
CISHQ9NSE2 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC6.26□□□□□ -1.41
CISHQ9NSE2 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC6.26□□□□□ -1.41
CISHQ9NSE2 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC6.26□□□□□ -1.41
CISHQ9NSE2 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC6.26□□□□□ -1.41
CISHQ9NSE2 AC087269.2-201ENST00000641764 975 ntBASIC6.26□□□□□ -1.41
CISHQ9NSE2 PDZK1P1-202ENST00000425209 1350 ntBASIC6.26□□□□□ -1.41
CISHQ9NSE2 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CISHQ9NSE2 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC6.26□□□□□ -1.41
CISHQ9NSE2 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC6.26□□□□□ -1.41
CISHQ9NSE2 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CISHQ9NSE2 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC6.26□□□□□ -1.41
CISHQ9NSE2 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC6.26□□□□□ -1.41
CISHQ9NSE2 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CISHQ9NSE2 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC6.26□□□□□ -1.41
CISHQ9NSE2 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
CISHQ9NSE2 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC6.26□□□□□ -1.41
CISHQ9NSE2 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
CISHQ9NSE2 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC6.25□□□□□ -1.41
CISHQ9NSE2 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 73.7 ms