Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 TTTY4-201ENST00000436568 1346 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
PDLIM7Q9NR12 TTTY4C-201ENST00000456123 1346 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
PDLIM7Q9NR12 UTY-213ENST00000612274 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC7.3□□□□□ -1.24
PDLIM7Q9NR12 TMEFF2-203ENST00000409056 3364 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
PDLIM7Q9NR12 KIAA1549L-201ENST00000265654 4492 ntAPPRIS ALT2 TSL 2 BASIC7.3□□□□□ -1.24
PDLIM7Q9NR12 ATF6-201ENST00000367942 7496 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
PDLIM7Q9NR12 RIOK2-202ENST00000508447 2149 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
PDLIM7Q9NR12 CLASP2-225ENST00000635664 4176 ntTSL 5 BASIC7.3□□□□□ -1.24
PDLIM7Q9NR12 AC007359.1-202ENST00000419158 2939 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
PDLIM7Q9NR12 AC008175.1-201ENST00000446299 2939 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
PDLIM7Q9NR12 MYLK-206ENST00000418370 7282 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
PDLIM7Q9NR12 AC093225.1-201ENST00000506867 1408 ntBASIC7.3□□□□□ -1.24
PDLIM7Q9NR12 GABRA6-207ENST00000523217 2393 ntTSL 5 BASIC7.3□□□□□ -1.24
PDLIM7Q9NR12 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC7.3□□□□□ -1.24
PDLIM7Q9NR12 ABI1-207ENST00000376142 3576 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
PDLIM7Q9NR12 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
PDLIM7Q9NR12 ATP5F1P2-201ENST00000398143 760 ntBASIC7.3□□□□□ -1.24
PDLIM7Q9NR12 RPL5P20-201ENST00000403848 896 ntBASIC7.3□□□□□ -1.24
PDLIM7Q9NR12 AL139805.1-201ENST00000407837 289 ntBASIC7.3□□□□□ -1.24
PDLIM7Q9NR12 RN7SKP108-201ENST00000411367 328 ntBASIC7.3□□□□□ -1.24
PDLIM7Q9NR12 SLC20A1P1-201ENST00000413906 956 ntBASIC7.3□□□□□ -1.24
PDLIM7Q9NR12 GNRHR-202ENST00000420975 859 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
PDLIM7Q9NR12 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC7.3□□□□□ -1.24
PDLIM7Q9NR12 BRWD1P3-201ENST00000428816 390 ntBASIC7.3□□□□□ -1.24
PDLIM7Q9NR12 CLUHP1-201ENST00000435012 1190 ntBASIC7.3□□□□□ -1.24
PDLIM7Q9NR12 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC7.3□□□□□ -1.24
PDLIM7Q9NR12 AC010240.2-201ENST00000445363 1205 ntBASIC7.3□□□□□ -1.24
PDLIM7Q9NR12 MTND1P29-201ENST00000448112 647 ntBASIC7.3□□□□□ -1.24
PDLIM7Q9NR12 AC112492.1-201ENST00000449607 712 ntBASIC7.3□□□□□ -1.24
PDLIM7Q9NR12 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC7.3□□□□□ -1.24
PDLIM7Q9NR12 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC7.3□□□□□ -1.24
PDLIM7Q9NR12 H3F3AP3-201ENST00000497682 407 ntBASIC7.3□□□□□ -1.24
PDLIM7Q9NR12 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC7.3□□□□□ -1.24
PDLIM7Q9NR12 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC7.3□□□□□ -1.24
PDLIM7Q9NR12 AC083906.1-201ENST00000509298 406 ntBASIC7.3□□□□□ -1.24
PDLIM7Q9NR12 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC7.3□□□□□ -1.24
PDLIM7Q9NR12 RNU6-311P-201ENST00000516224 102 ntBASIC7.3□□□□□ -1.24
PDLIM7Q9NR12 ODF1-202ENST00000518835 368 ntTSL 3 BASIC7.3□□□□□ -1.24
PDLIM7Q9NR12 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC7.3□□□□□ -1.24
PDLIM7Q9NR12 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC7.3□□□□□ -1.24
PDLIM7Q9NR12 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC7.3□□□□□ -1.24
PDLIM7Q9NR12 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC7.3□□□□□ -1.24
PDLIM7Q9NR12 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC7.3□□□□□ -1.24
PDLIM7Q9NR12 MTND3P13-201ENST00000574391 343 ntBASIC7.3□□□□□ -1.24
PDLIM7Q9NR12 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC7.3□□□□□ -1.24
PDLIM7Q9NR12 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
PDLIM7Q9NR12 FAM60CP-201ENST00000591086 664 ntBASIC7.3□□□□□ -1.24
PDLIM7Q9NR12 ZNF675-208ENST00000601010 669 ntTSL 5 BASIC7.3□□□□□ -1.24
PDLIM7Q9NR12 AL157899.1-201ENST00000604110 936 ntBASIC7.3□□□□□ -1.24
PDLIM7Q9NR12 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC7.3□□□□□ -1.24
PDLIM7Q9NR12 RNU6-1192P-201ENST00000612197 107 ntBASIC7.3□□□□□ -1.24
PDLIM7Q9NR12 AC009090.3-201ENST00000616553 565 ntBASIC7.3□□□□□ -1.24
PDLIM7Q9NR12 RNU6-489P-201ENST00000618289 107 ntBASIC7.3□□□□□ -1.24
PDLIM7Q9NR12 AC091304.6-201ENST00000619761 202 ntBASIC7.3□□□□□ -1.24
PDLIM7Q9NR12 AL669942.2-201ENST00000620352 697 ntBASIC7.3□□□□□ -1.24
PDLIM7Q9NR12 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC7.3□□□□□ -1.24
PDLIM7Q9NR12 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC7.3□□□□□ -1.24
PDLIM7Q9NR12 ATP10B-202ENST00000327245 7566 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
PDLIM7Q9NR12 PHLDB2-202ENST00000393925 5543 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
PDLIM7Q9NR12 CDH12-201ENST00000382254 4164 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
PDLIM7Q9NR12 ACSL5-203ENST00000356116 3353 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
PDLIM7Q9NR12 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC7.3□□□□□ -1.24
PDLIM7Q9NR12 DDX43P2-201ENST00000604753 1354 ntBASIC7.3□□□□□ -1.24
PDLIM7Q9NR12 MLLT10-202ENST00000377059 4850 ntAPPRIS ALT2 TSL 1 (best) BASIC7.3□□□□□ -1.24
PDLIM7Q9NR12 TMEM170B-201ENST00000379426 8362 ntAPPRIS P1 TSL 4 BASIC7.3□□□□□ -1.24
PDLIM7Q9NR12 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
PDLIM7Q9NR12 NCOA4P3-201ENST00000513203 1877 ntBASIC7.3□□□□□ -1.24
PDLIM7Q9NR12 DAZ1-201ENST00000382510 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC7.3□□□□□ -1.24
PDLIM7Q9NR12 AC104581.5-201ENST00000624171 7141 ntBASIC7.3□□□□□ -1.24
PDLIM7Q9NR12 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC7.3□□□□□ -1.24
PDLIM7Q9NR12 FAM161A-202ENST00000404929 3762 ntAPPRIS ALT2 TSL 1 (best) BASIC7.3□□□□□ -1.24
PDLIM7Q9NR12 TMEM68-219ENST00000617977 4512 ntTSL 5 BASIC7.29□□□□□ -1.24
PDLIM7Q9NR12 GGCX-201ENST00000233838 7569 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
PDLIM7Q9NR12 GCNA-201ENST00000373695 3213 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
PDLIM7Q9NR12 AC008147.2-201ENST00000552061 4713 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
PDLIM7Q9NR12 IGF1R-206ENST00000558762 11726 ntAPPRIS ALT1 TSL 1 (best) BASIC7.29□□□□□ -1.24
PDLIM7Q9NR12 GAS2-201ENST00000278187 2170 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
PDLIM7Q9NR12 RARSP1-201ENST00000542842 1418 ntBASIC7.29□□□□□ -1.24
PDLIM7Q9NR12 AC087477.2-202ENST00000558499 4856 ntTSL 4 BASIC7.29□□□□□ -1.24
PDLIM7Q9NR12 SUPT7L-202ENST00000404798 4114 ntTSL 2 BASIC7.29□□□□□ -1.24
PDLIM7Q9NR12 MTMR7-201ENST00000180173 3850 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
PDLIM7Q9NR12 PTPN2-212ENST00000591497 3390 ntTSL 5 BASIC7.29□□□□□ -1.24
PDLIM7Q9NR12 HDAC9-202ENST00000405010 4239 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
PDLIM7Q9NR12 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
PDLIM7Q9NR12 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
PDLIM7Q9NR12 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC7.29□□□□□ -1.24
PDLIM7Q9NR12 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
PDLIM7Q9NR12 AC023490.2-201ENST00000359859 470 ntBASIC7.29□□□□□ -1.24
PDLIM7Q9NR12 AL049697.3-201ENST00000406493 982 ntBASIC7.29□□□□□ -1.24
PDLIM7Q9NR12 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC7.29□□□□□ -1.24
PDLIM7Q9NR12 MTATP6P20-201ENST00000414147 562 ntBASIC7.29□□□□□ -1.24
PDLIM7Q9NR12 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC7.29□□□□□ -1.24
PDLIM7Q9NR12 AL392003.1-201ENST00000434394 243 ntBASIC7.29□□□□□ -1.24
PDLIM7Q9NR12 AC003989.1-201ENST00000434569 565 ntBASIC7.29□□□□□ -1.24
PDLIM7Q9NR12 AC245047.2-201ENST00000441060 530 ntBASIC7.29□□□□□ -1.24
PDLIM7Q9NR12 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC7.29□□□□□ -1.24
PDLIM7Q9NR12 SPANXB1-201ENST00000449283 469 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
PDLIM7Q9NR12 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC7.29□□□□□ -1.24
PDLIM7Q9NR12 RPL32P14-201ENST00000463196 378 ntBASIC7.29□□□□□ -1.24
PDLIM7Q9NR12 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC7.29□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 87 ms