Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 RNA5SP110-201ENST00000362638 115 ntBASIC7.15□□□□□ -1.26
VTA1Q9NP79 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
VTA1Q9NP79 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
VTA1Q9NP79 RN7SKP121-201ENST00000410842 305 ntBASIC7.15□□□□□ -1.26
VTA1Q9NP79 RPS21P8-201ENST00000413365 247 ntBASIC7.15□□□□□ -1.26
VTA1Q9NP79 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
VTA1Q9NP79 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC7.15□□□□□ -1.26
VTA1Q9NP79 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC7.15□□□□□ -1.26
VTA1Q9NP79 VN1R37P-201ENST00000419096 748 ntBASIC7.15□□□□□ -1.26
VTA1Q9NP79 AC066692.1-201ENST00000421721 457 ntBASIC7.15□□□□□ -1.26
VTA1Q9NP79 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC7.15□□□□□ -1.26
VTA1Q9NP79 AC130360.1-201ENST00000425489 1117 ntBASIC7.15□□□□□ -1.26
VTA1Q9NP79 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC7.15□□□□□ -1.26
VTA1Q9NP79 ATP6V1E1P1-201ENST00000439215 681 ntBASIC7.15□□□□□ -1.26
VTA1Q9NP79 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
VTA1Q9NP79 HIGD1AP16-201ENST00000450986 258 ntBASIC7.15□□□□□ -1.26
VTA1Q9NP79 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC7.15□□□□□ -1.26
VTA1Q9NP79 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC7.15□□□□□ -1.26
VTA1Q9NP79 AK4P6-201ENST00000505168 528 ntBASIC7.15□□□□□ -1.26
VTA1Q9NP79 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC7.15□□□□□ -1.26
VTA1Q9NP79 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC7.15□□□□□ -1.26
VTA1Q9NP79 AC106800.2-201ENST00000514009 1103 ntBASIC7.15□□□□□ -1.26
VTA1Q9NP79 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC7.15□□□□□ -1.26
VTA1Q9NP79 AC022973.3-201ENST00000521014 467 ntTSL 5 BASIC7.15□□□□□ -1.26
VTA1Q9NP79 IGKV3D-34-201ENST00000522638 302 ntBASIC7.15□□□□□ -1.26
VTA1Q9NP79 AC130365.2-201ENST00000525882 1201 ntBASIC7.15□□□□□ -1.26
VTA1Q9NP79 OSBPL9P3-201ENST00000534523 595 ntBASIC7.15□□□□□ -1.26
VTA1Q9NP79 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
VTA1Q9NP79 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
VTA1Q9NP79 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
VTA1Q9NP79 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC7.15□□□□□ -1.26
VTA1Q9NP79 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
VTA1Q9NP79 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC7.15□□□□□ -1.26
VTA1Q9NP79 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC7.15□□□□□ -1.26
VTA1Q9NP79 MIR6862-1-201ENST00000613016 70 ntBASIC7.15□□□□□ -1.26
VTA1Q9NP79 MIR6862-2-201ENST00000614755 70 ntBASIC7.15□□□□□ -1.26
VTA1Q9NP79 AC025016.1-201ENST00000616746 682 ntBASIC7.15□□□□□ -1.26
VTA1Q9NP79 SNX18P12-201ENST00000624821 759 ntBASIC7.15□□□□□ -1.26
VTA1Q9NP79 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC7.15□□□□□ -1.26
VTA1Q9NP79 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC7.15□□□□□ -1.26
VTA1Q9NP79 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC7.15□□□□□ -1.26
VTA1Q9NP79 UOX-205ENST00000640983 544 ntTSL 4 BASIC7.15□□□□□ -1.26
VTA1Q9NP79 SLC9B1P1-201ENST00000331172 1337 ntBASIC7.15□□□□□ -1.26
VTA1Q9NP79 AC009501.3-201ENST00000605001 1352 ntBASIC7.15□□□□□ -1.26
VTA1Q9NP79 CLCA3P-203ENST00000490028 2781 ntBASIC7.15□□□□□ -1.26
VTA1Q9NP79 MTCO1P28-201ENST00000574177 1528 ntBASIC7.15□□□□□ -1.27
VTA1Q9NP79 ZNF227-213ENST00000621083 3055 ntAPPRIS P1 TSL 2 BASIC7.15□□□□□ -1.27
VTA1Q9NP79 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
VTA1Q9NP79 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC7.15□□□□□ -1.27
VTA1Q9NP79 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC7.15□□□□□ -1.27
VTA1Q9NP79 MAPK10-365ENST00000641902 3825 ntBASIC7.15□□□□□ -1.27
VTA1Q9NP79 AL357568.1-201ENST00000421530 1963 ntTSL 2 BASIC7.15□□□□□ -1.27
VTA1Q9NP79 ITGA1-201ENST00000282588 10757 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
VTA1Q9NP79 MGAM-202ENST00000475668 9172 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.27
VTA1Q9NP79 NAMPTP1-201ENST00000440465 2514 ntBASIC7.15□□□□□ -1.27
VTA1Q9NP79 CAGE1-203ENST00000379918 2877 ntAPPRIS ALT2 TSL 5 BASIC7.14□□□□□ -1.27
VTA1Q9NP79 JAKMIP2-205ENST00000507386 5915 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
VTA1Q9NP79 ZNF658B-201ENST00000602828 3408 ntBASIC7.14□□□□□ -1.27
VTA1Q9NP79 ATP1A1-203ENST00000369496 3572 ntTSL 2 BASIC7.14□□□□□ -1.27
VTA1Q9NP79 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC7.14□□□□□ -1.27
VTA1Q9NP79 CCDC158-201ENST00000388914 3663 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
VTA1Q9NP79 RPGRIP1L-206ENST00000564374 3877 ntTSL 2 BASIC7.14□□□□□ -1.27
VTA1Q9NP79 MOB4-201ENST00000233892 3785 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
VTA1Q9NP79 OR2M1P-201ENST00000318104 951 ntBASIC7.14□□□□□ -1.27
VTA1Q9NP79 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
VTA1Q9NP79 AC023490.2-201ENST00000359859 470 ntBASIC7.14□□□□□ -1.27
VTA1Q9NP79 RNA5SP188-201ENST00000362916 129 ntBASIC7.14□□□□□ -1.27
VTA1Q9NP79 STAMBPL1-201ENST00000371922 1899 ntTSL 2 BASIC7.14□□□□□ -1.27
VTA1Q9NP79 RNU6-1257P-201ENST00000384625 110 ntBASIC7.14□□□□□ -1.27
VTA1Q9NP79 MIR130B-202ENST00000385018 82 ntBASIC7.14□□□□□ -1.27
VTA1Q9NP79 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC7.14□□□□□ -1.27
VTA1Q9NP79 NCAPG2-202ENST00000409339 5253 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
VTA1Q9NP79 STAT4-203ENST00000409995 709 ntTSL 5 BASIC7.14□□□□□ -1.27
VTA1Q9NP79 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC7.14□□□□□ -1.27
VTA1Q9NP79 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC7.14□□□□□ -1.27
VTA1Q9NP79 AL139415.1-201ENST00000424862 352 ntBASIC7.14□□□□□ -1.27
VTA1Q9NP79 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC7.14□□□□□ -1.27
VTA1Q9NP79 AL512637.2-201ENST00000431287 1256 ntBASIC7.14□□□□□ -1.27
VTA1Q9NP79 RPS26P4-201ENST00000431743 355 ntBASIC7.14□□□□□ -1.27
VTA1Q9NP79 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
VTA1Q9NP79 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
VTA1Q9NP79 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC7.14□□□□□ -1.27
VTA1Q9NP79 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC7.14□□□□□ -1.27
VTA1Q9NP79 CEACAMP5-201ENST00000448037 961 ntBASIC7.14□□□□□ -1.27
VTA1Q9NP79 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC7.14□□□□□ -1.27
VTA1Q9NP79 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
VTA1Q9NP79 AC104629.2-201ENST00000468627 598 ntBASIC7.14□□□□□ -1.27
VTA1Q9NP79 NPM1P17-201ENST00000479221 602 ntBASIC7.14□□□□□ -1.27
VTA1Q9NP79 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
VTA1Q9NP79 RPL34P33-201ENST00000486062 334 ntBASIC7.14□□□□□ -1.27
VTA1Q9NP79 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC7.14□□□□□ -1.27
VTA1Q9NP79 CSNK1A1-205ENST00000515435 1856 ntTSL 5 BASIC7.14□□□□□ -1.27
VTA1Q9NP79 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC7.14□□□□□ -1.27
VTA1Q9NP79 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC7.14□□□□□ -1.27
VTA1Q9NP79 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC7.14□□□□□ -1.27
VTA1Q9NP79 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC7.14□□□□□ -1.27
VTA1Q9NP79 ASCL3-201ENST00000531618 633 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
VTA1Q9NP79 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC7.14□□□□□ -1.27
VTA1Q9NP79 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC7.14□□□□□ -1.27
VTA1Q9NP79 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC7.14□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 89.1 ms