Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 AC068408.1-201ENST00000577406 1144 ntBASIC5.4□□□□□ -1.54
HMG20AQ9NP66 AC016839.1-201ENST00000578162 867 ntBASIC5.4□□□□□ -1.54
HMG20AQ9NP66 SYPL1P2-201ENST00000582878 727 ntBASIC5.4□□□□□ -1.54
HMG20AQ9NP66 AL133481.2-203ENST00000607558 139 ntBASIC5.4□□□□□ -1.54
HMG20AQ9NP66 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC5.4□□□□□ -1.54
HMG20AQ9NP66 SMR3B-204ENST00000614072 783 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
HMG20AQ9NP66 AL162574.1-201ENST00000615702 950 ntBASIC5.4□□□□□ -1.54
HMG20AQ9NP66 AL049541.1-201ENST00000630976 642 ntTSL 2 BASIC5.4□□□□□ -1.54
HMG20AQ9NP66 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC5.4□□□□□ -1.54
HMG20AQ9NP66 AC099654.11-201ENST00000638857 294 ntBASIC5.4□□□□□ -1.54
HMG20AQ9NP66 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
HMG20AQ9NP66 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
HMG20AQ9NP66 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC5.4□□□□□ -1.55
HMG20AQ9NP66 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
HMG20AQ9NP66 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
HMG20AQ9NP66 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
HMG20AQ9NP66 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
HMG20AQ9NP66 AL353743.3-201ENST00000442109 1468 ntBASIC5.39□□□□□ -1.55
HMG20AQ9NP66 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
HMG20AQ9NP66 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC5.39□□□□□ -1.55
HMG20AQ9NP66 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
HMG20AQ9NP66 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
HMG20AQ9NP66 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC5.39□□□□□ -1.55
HMG20AQ9NP66 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
HMG20AQ9NP66 NAP1L4P1-201ENST00000319092 1157 ntBASIC5.39□□□□□ -1.55
HMG20AQ9NP66 SNORD35A-201ENST00000363389 86 ntBASIC5.39□□□□□ -1.55
HMG20AQ9NP66 AL591503.1-201ENST00000366224 477 ntTSL 5 BASIC5.39□□□□□ -1.55
HMG20AQ9NP66 RSPO3-202ENST00000368317 1290 ntTSL 2 BASIC5.39□□□□□ -1.55
HMG20AQ9NP66 TINAG-202ENST00000370864 692 ntTSL 2 BASIC5.39□□□□□ -1.55
HMG20AQ9NP66 SNORA7A-201ENST00000384765 139 ntBASIC5.39□□□□□ -1.55
HMG20AQ9NP66 TP63-205ENST00000392461 1251 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
HMG20AQ9NP66 RNA5SP155-201ENST00000411154 129 ntBASIC5.39□□□□□ -1.55
HMG20AQ9NP66 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
HMG20AQ9NP66 AC083862.1-201ENST00000427378 1242 ntBASIC5.39□□□□□ -1.55
HMG20AQ9NP66 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.39□□□□□ -1.55
HMG20AQ9NP66 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
HMG20AQ9NP66 AC016908.1-201ENST00000442571 1219 ntBASIC5.39□□□□□ -1.55
HMG20AQ9NP66 AC114752.1-201ENST00000448204 289 ntTSL 3 BASIC5.39□□□□□ -1.55
HMG20AQ9NP66 FRG2FP-204ENST00000453982 852 ntBASIC5.39□□□□□ -1.55
HMG20AQ9NP66 RPL12P39-201ENST00000455456 496 ntBASIC5.39□□□□□ -1.55
HMG20AQ9NP66 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
HMG20AQ9NP66 MGAT4D-201ENST00000503109 1281 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
HMG20AQ9NP66 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC5.39□□□□□ -1.55
HMG20AQ9NP66 RAD21-204ENST00000518055 896 ntTSL 2 BASIC5.39□□□□□ -1.55
HMG20AQ9NP66 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC5.39□□□□□ -1.55
HMG20AQ9NP66 AC126615.2-201ENST00000553003 515 ntBASIC5.39□□□□□ -1.55
HMG20AQ9NP66 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.39□□□□□ -1.55
HMG20AQ9NP66 AC097641.3-201ENST00000613523 464 ntBASIC5.39□□□□□ -1.55
HMG20AQ9NP66 PRL-202ENST00000615510 1268 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
HMG20AQ9NP66 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC5.39□□□□□ -1.55
HMG20AQ9NP66 CCL15-204ENST00000617897 1073 ntAPPRIS P2 TSL 1 (best) BASIC5.39□□□□□ -1.55
HMG20AQ9NP66 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
HMG20AQ9NP66 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.39□□□□□ -1.55
HMG20AQ9NP66 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.39□□□□□ -1.55
HMG20AQ9NP66 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
HMG20AQ9NP66 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
HMG20AQ9NP66 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
HMG20AQ9NP66 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.39□□□□□ -1.55
HMG20AQ9NP66 CASP5-201ENST00000260315 1414 ntTSL 5 BASIC5.39□□□□□ -1.55
HMG20AQ9NP66 AF121898.1-201ENST00000440763 1860 ntTSL 5 BASIC5.39□□□□□ -1.55
HMG20AQ9NP66 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC5.39□□□□□ -1.55
HMG20AQ9NP66 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
HMG20AQ9NP66 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC5.38□□□□□ -1.55
HMG20AQ9NP66 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
HMG20AQ9NP66 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC5.38□□□□□ -1.55
HMG20AQ9NP66 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC5.38□□□□□ -1.55
HMG20AQ9NP66 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
HMG20AQ9NP66 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
HMG20AQ9NP66 RNU1-84P-201ENST00000365447 164 ntBASIC5.38□□□□□ -1.55
HMG20AQ9NP66 RN7SKP279-201ENST00000411383 298 ntBASIC5.38□□□□□ -1.55
HMG20AQ9NP66 GNG5P5-201ENST00000420444 220 ntBASIC5.38□□□□□ -1.55
HMG20AQ9NP66 AC006509.1-201ENST00000420788 634 ntBASIC5.38□□□□□ -1.55
HMG20AQ9NP66 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC5.38□□□□□ -1.55
HMG20AQ9NP66 OSBPL10-AS1-203ENST00000428872 538 ntTSL 3 BASIC5.38□□□□□ -1.55
HMG20AQ9NP66 AC108479.1-201ENST00000431142 427 ntBASIC5.38□□□□□ -1.55
HMG20AQ9NP66 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
HMG20AQ9NP66 GAPDHP75-201ENST00000433910 943 ntBASIC5.38□□□□□ -1.55
HMG20AQ9NP66 AC242426.1-201ENST00000435270 960 ntBASIC5.38□□□□□ -1.55
HMG20AQ9NP66 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC5.38□□□□□ -1.55
HMG20AQ9NP66 NPM1P9-201ENST00000453156 844 ntBASIC5.38□□□□□ -1.55
HMG20AQ9NP66 BBOF1-202ENST00000463558 550 ntAPPRIS ALT2 TSL 2 BASIC5.38□□□□□ -1.55
HMG20AQ9NP66 RN7SL83P-201ENST00000468131 297 ntBASIC5.38□□□□□ -1.55
HMG20AQ9NP66 RN7SL267P-201ENST00000485107 261 ntBASIC5.38□□□□□ -1.55
HMG20AQ9NP66 RAB7A-208ENST00000493186 329 ntTSL 5 BASIC5.38□□□□□ -1.55
HMG20AQ9NP66 USP9YP2-201ENST00000504503 1000 ntBASIC5.38□□□□□ -1.55
HMG20AQ9NP66 USP9YP1-201ENST00000513521 1002 ntBASIC5.38□□□□□ -1.55
HMG20AQ9NP66 FBXO16-207ENST00000518734 995 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
HMG20AQ9NP66 OR8A2P-201ENST00000528631 952 ntBASIC5.38□□□□□ -1.55
HMG20AQ9NP66 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.38□□□□□ -1.55
HMG20AQ9NP66 TPRX1P1-201ENST00000557620 319 ntBASIC5.38□□□□□ -1.55
HMG20AQ9NP66 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC5.38□□□□□ -1.55
HMG20AQ9NP66 AC133552.4-201ENST00000576103 676 ntBASIC5.38□□□□□ -1.55
HMG20AQ9NP66 SUPT4H1-207ENST00000581540 668 ntTSL 2 BASIC5.38□□□□□ -1.55
HMG20AQ9NP66 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
HMG20AQ9NP66 AL353729.2-201ENST00000605859 1249 ntBASIC5.38□□□□□ -1.55
HMG20AQ9NP66 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC5.38□□□□□ -1.55
HMG20AQ9NP66 MIR6070-201ENST00000613967 103 ntBASIC5.38□□□□□ -1.55
HMG20AQ9NP66 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC5.38□□□□□ -1.55
HMG20AQ9NP66 MIR7159-201ENST00000620587 66 ntBASIC5.38□□□□□ -1.55
HMG20AQ9NP66 AC007204.1-201ENST00000621794 555 ntBASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 176.2 ms