Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC6.23□□□□□ -1.41
PCDH9Q9HC56 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC6.23□□□□□ -1.41
PCDH9Q9HC56 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
PCDH9Q9HC56 SNX24-202ENST00000395451 1050 ntTSL 3 BASIC6.23□□□□□ -1.41
PCDH9Q9HC56 RPS15AP30-201ENST00000420976 390 ntBASIC6.23□□□□□ -1.41
PCDH9Q9HC56 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC6.23□□□□□ -1.41
PCDH9Q9HC56 AC006455.6-201ENST00000426192 893 ntBASIC6.23□□□□□ -1.41
PCDH9Q9HC56 NAP1L4P3-201ENST00000432820 1147 ntBASIC6.23□□□□□ -1.41
PCDH9Q9HC56 WDR11-AS1-201ENST00000451706 1108 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
PCDH9Q9HC56 OR7L1P-201ENST00000456181 380 ntBASIC6.23□□□□□ -1.41
PCDH9Q9HC56 RN7SL254P-201ENST00000460609 284 ntBASIC6.23□□□□□ -1.41
PCDH9Q9HC56 AC093719.1-201ENST00000480427 441 ntBASIC6.23□□□□□ -1.41
PCDH9Q9HC56 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC6.23□□□□□ -1.41
PCDH9Q9HC56 MAST4-IT1-201ENST00000514241 658 ntBASIC6.23□□□□□ -1.41
PCDH9Q9HC56 snoU109.5-201ENST00000516231 132 ntBASIC6.23□□□□□ -1.41
PCDH9Q9HC56 RNA5SP434-201ENST00000516647 121 ntBASIC6.23□□□□□ -1.41
PCDH9Q9HC56 SNORA81.2-201ENST00000516868 170 ntBASIC6.23□□□□□ -1.41
PCDH9Q9HC56 AC109466.1-215ENST00000519750 516 ntTSL 5 BASIC6.23□□□□□ -1.41
PCDH9Q9HC56 GOLT1B-205ENST00000540141 1055 ntAPPRIS ALT1 TSL 4 BASIC6.23□□□□□ -1.41
PCDH9Q9HC56 AC069208.1-201ENST00000540811 676 ntTSL 4 BASIC6.23□□□□□ -1.41
PCDH9Q9HC56 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC6.23□□□□□ -1.41
PCDH9Q9HC56 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC6.23□□□□□ -1.41
PCDH9Q9HC56 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC6.23□□□□□ -1.41
PCDH9Q9HC56 MIR3154-201ENST00000577829 84 ntBASIC6.23□□□□□ -1.41
PCDH9Q9HC56 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
PCDH9Q9HC56 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC6.23□□□□□ -1.41
PCDH9Q9HC56 AL355974.3-201ENST00000617383 467 ntBASIC6.23□□□□□ -1.41
PCDH9Q9HC56 AC073488.6-201ENST00000632293 754 ntBASIC6.23□□□□□ -1.41
PCDH9Q9HC56 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
PCDH9Q9HC56 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
PCDH9Q9HC56 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
PCDH9Q9HC56 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
PCDH9Q9HC56 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
PCDH9Q9HC56 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC6.23□□□□□ -1.41
PCDH9Q9HC56 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC6.23□□□□□ -1.41
PCDH9Q9HC56 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
PCDH9Q9HC56 Z95114.1-201ENST00000624264 14574 ntBASIC6.22□□□□□ -1.41
PCDH9Q9HC56 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
PCDH9Q9HC56 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC6.22□□□□□ -1.41
PCDH9Q9HC56 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC6.22□□□□□ -1.41
PCDH9Q9HC56 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
PCDH9Q9HC56 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
PCDH9Q9HC56 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
PCDH9Q9HC56 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
PCDH9Q9HC56 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC6.22□□□□□ -1.41
PCDH9Q9HC56 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
PCDH9Q9HC56 RNU105B-201ENST00000364478 208 ntBASIC6.22□□□□□ -1.41
PCDH9Q9HC56 MYL6P5-201ENST00000412707 459 ntBASIC6.22□□□□□ -1.41
PCDH9Q9HC56 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC6.22□□□□□ -1.41
PCDH9Q9HC56 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC6.22□□□□□ -1.41
PCDH9Q9HC56 AL354893.1-201ENST00000433735 348 ntBASIC6.22□□□□□ -1.41
PCDH9Q9HC56 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
PCDH9Q9HC56 HMGB1P7-201ENST00000450921 612 ntBASIC6.22□□□□□ -1.41
PCDH9Q9HC56 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC6.22□□□□□ -1.41
PCDH9Q9HC56 AC018797.1-201ENST00000510791 255 ntBASIC6.22□□□□□ -1.41
PCDH9Q9HC56 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC6.22□□□□□ -1.41
PCDH9Q9HC56 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC6.22□□□□□ -1.41
PCDH9Q9HC56 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC6.22□□□□□ -1.41
PCDH9Q9HC56 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
PCDH9Q9HC56 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC6.22□□□□□ -1.41
PCDH9Q9HC56 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC6.22□□□□□ -1.41
PCDH9Q9HC56 MRPS21P8-201ENST00000569196 235 ntBASIC6.22□□□□□ -1.41
PCDH9Q9HC56 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC6.22□□□□□ -1.41
PCDH9Q9HC56 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC6.22□□□□□ -1.41
PCDH9Q9HC56 AC009779.8-202ENST00000607990 932 ntBASIC6.22□□□□□ -1.41
PCDH9Q9HC56 MIR6780B-201ENST00000610307 79 ntBASIC6.22□□□□□ -1.41
PCDH9Q9HC56 AC022960.2-201ENST00000616300 666 ntBASIC6.22□□□□□ -1.41
PCDH9Q9HC56 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC6.22□□□□□ -1.41
PCDH9Q9HC56 AF117829.2-201ENST00000619538 361 ntBASIC6.22□□□□□ -1.41
PCDH9Q9HC56 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC6.22□□□□□ -1.41
PCDH9Q9HC56 CASC19-274ENST00000642018 970 ntBASIC6.22□□□□□ -1.41
PCDH9Q9HC56 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
PCDH9Q9HC56 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
PCDH9Q9HC56 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC6.22□□□□□ -1.41
PCDH9Q9HC56 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
PCDH9Q9HC56 AL161756.3-201ENST00000641216 2071 ntBASIC6.22□□□□□ -1.41
PCDH9Q9HC56 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
PCDH9Q9HC56 THAP12P9-201ENST00000503971 2360 ntBASIC6.22□□□□□ -1.41
PCDH9Q9HC56 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC6.22□□□□□ -1.41
PCDH9Q9HC56 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
PCDH9Q9HC56 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
PCDH9Q9HC56 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC6.21□□□□□ -1.41
PCDH9Q9HC56 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
PCDH9Q9HC56 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
PCDH9Q9HC56 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
PCDH9Q9HC56 TTC41P-205ENST00000551270 3963 ntBASIC6.21□□□□□ -1.41
PCDH9Q9HC56 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
PCDH9Q9HC56 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
PCDH9Q9HC56 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC6.21□□□□□ -1.42
PCDH9Q9HC56 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
PCDH9Q9HC56 NCOA4P2-201ENST00000340589 1813 ntBASIC6.21□□□□□ -1.42
PCDH9Q9HC56 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
PCDH9Q9HC56 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
PCDH9Q9HC56 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC6.21□□□□□ -1.42
PCDH9Q9HC56 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
PCDH9Q9HC56 RNA5SP156-201ENST00000410250 110 ntBASIC6.21□□□□□ -1.42
PCDH9Q9HC56 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC6.21□□□□□ -1.42
PCDH9Q9HC56 CCNB1IP1P1-201ENST00000428976 839 ntBASIC6.21□□□□□ -1.42
PCDH9Q9HC56 RPSAP65-201ENST00000429660 595 ntBASIC6.21□□□□□ -1.42
PCDH9Q9HC56 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC6.21□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 130.8 ms