Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
BRF2Q9HAW0 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
BRF2Q9HAW0 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
BRF2Q9HAW0 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC5.96□□□□□ -1.46
BRF2Q9HAW0 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC5.96□□□□□ -1.46
BRF2Q9HAW0 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
BRF2Q9HAW0 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC5.96□□□□□ -1.46
BRF2Q9HAW0 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC5.96□□□□□ -1.46
BRF2Q9HAW0 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
BRF2Q9HAW0 AC010132.2-201ENST00000295493 1043 ntBASIC5.96□□□□□ -1.46
BRF2Q9HAW0 OR5B21-201ENST00000360374 931 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
BRF2Q9HAW0 RNU1-49P-201ENST00000363468 159 ntBASIC5.96□□□□□ -1.46
BRF2Q9HAW0 RNU1-59P-201ENST00000364829 162 ntBASIC5.96□□□□□ -1.46
BRF2Q9HAW0 SNORA43.1-201ENST00000364863 140 ntBASIC5.96□□□□□ -1.46
BRF2Q9HAW0 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
BRF2Q9HAW0 AC003045.1-201ENST00000398779 713 ntBASIC5.96□□□□□ -1.46
BRF2Q9HAW0 AL121835.1-201ENST00000404250 354 ntBASIC5.96□□□□□ -1.46
BRF2Q9HAW0 RNU2-72P-201ENST00000411175 163 ntBASIC5.96□□□□□ -1.46
BRF2Q9HAW0 RPL23AP18-201ENST00000416139 468 ntBASIC5.96□□□□□ -1.46
BRF2Q9HAW0 AC015977.1-201ENST00000418887 292 ntBASIC5.96□□□□□ -1.46
BRF2Q9HAW0 AC234781.4-201ENST00000419384 244 ntBASIC5.96□□□□□ -1.46
BRF2Q9HAW0 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
BRF2Q9HAW0 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC5.96□□□□□ -1.46
BRF2Q9HAW0 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
BRF2Q9HAW0 AL606490.7-201ENST00000433136 191 ntBASIC5.96□□□□□ -1.46
BRF2Q9HAW0 RPEP4-201ENST00000437636 602 ntBASIC5.96□□□□□ -1.46
BRF2Q9HAW0 PPIAP10-201ENST00000438675 458 ntBASIC5.96□□□□□ -1.46
BRF2Q9HAW0 AL450263.1-202ENST00000453199 643 ntTSL 3 BASIC5.96□□□□□ -1.46
BRF2Q9HAW0 NFU1-207ENST00000462320 558 ntTSL 4 BASIC5.96□□□□□ -1.46
BRF2Q9HAW0 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC5.96□□□□□ -1.46
BRF2Q9HAW0 AL035690.1-201ENST00000490892 383 ntBASIC5.96□□□□□ -1.46
BRF2Q9HAW0 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC5.96□□□□□ -1.46
BRF2Q9HAW0 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC5.96□□□□□ -1.46
BRF2Q9HAW0 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC5.96□□□□□ -1.46
BRF2Q9HAW0 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC5.96□□□□□ -1.46
BRF2Q9HAW0 LDHC-205ENST00000537486 583 ntTSL 5 BASIC5.96□□□□□ -1.46
BRF2Q9HAW0 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC5.96□□□□□ -1.46
BRF2Q9HAW0 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC5.96□□□□□ -1.46
BRF2Q9HAW0 RPARP-AS1-204ENST00000594818 445 ntTSL 3 BASIC5.96□□□□□ -1.46
BRF2Q9HAW0 AL589765.6-201ENST00000601909 549 ntBASIC5.96□□□□□ -1.46
BRF2Q9HAW0 AC092474.3-201ENST00000603022 568 ntBASIC5.96□□□□□ -1.46
BRF2Q9HAW0 IGKV2OR2-1-201ENST00000605129 304 ntBASIC5.96□□□□□ -1.46
BRF2Q9HAW0 AL589740.1-209ENST00000607032 1056 ntTSL 3 BASIC5.96□□□□□ -1.46
BRF2Q9HAW0 LIPF-205ENST00000608620 1290 ntTSL 2 BASIC5.96□□□□□ -1.46
BRF2Q9HAW0 U1.25-201ENST00000614085 162 ntBASIC5.96□□□□□ -1.46
BRF2Q9HAW0 OR8G7P-201ENST00000616658 848 ntBASIC5.96□□□□□ -1.46
BRF2Q9HAW0 AL133370.2-201ENST00000619934 439 ntBASIC5.96□□□□□ -1.46
BRF2Q9HAW0 U1.31-201ENST00000620022 160 ntBASIC5.96□□□□□ -1.46
BRF2Q9HAW0 AC015722.2-201ENST00000622210 551 ntBASIC5.96□□□□□ -1.46
BRF2Q9HAW0 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC5.96□□□□□ -1.46
BRF2Q9HAW0 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
BRF2Q9HAW0 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC5.96□□□□□ -1.46
BRF2Q9HAW0 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC5.96□□□□□ -1.46
BRF2Q9HAW0 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
BRF2Q9HAW0 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
BRF2Q9HAW0 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC5.96□□□□□ -1.46
BRF2Q9HAW0 LINC02318-201ENST00000553785 1334 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
BRF2Q9HAW0 SAMMSON-210ENST00000641260 1308 ntBASIC5.96□□□□□ -1.46
BRF2Q9HAW0 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
BRF2Q9HAW0 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC5.96□□□□□ -1.46
BRF2Q9HAW0 CASC19-246ENST00000641625 1606 ntBASIC5.96□□□□□ -1.46
BRF2Q9HAW0 UEVLD-202ENST00000320750 1799 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
BRF2Q9HAW0 CDC27P2-201ENST00000425026 1922 ntBASIC5.95□□□□□ -1.46
BRF2Q9HAW0 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC5.95□□□□□ -1.46
BRF2Q9HAW0 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
BRF2Q9HAW0 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC5.95□□□□□ -1.46
BRF2Q9HAW0 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
BRF2Q9HAW0 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC5.95□□□□□ -1.46
BRF2Q9HAW0 LIPF-201ENST00000238983 1376 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
BRF2Q9HAW0 EEF1A1P14-201ENST00000421195 1376 ntBASIC5.95□□□□□ -1.46
BRF2Q9HAW0 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
BRF2Q9HAW0 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
BRF2Q9HAW0 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
BRF2Q9HAW0 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
BRF2Q9HAW0 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC5.95□□□□□ -1.46
BRF2Q9HAW0 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC5.95□□□□□ -1.46
BRF2Q9HAW0 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
BRF2Q9HAW0 RPL23AP17-201ENST00000401064 499 ntBASIC5.95□□□□□ -1.46
BRF2Q9HAW0 RPL10P10-201ENST00000403509 664 ntBASIC5.95□□□□□ -1.46
BRF2Q9HAW0 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC5.95□□□□□ -1.46
BRF2Q9HAW0 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC5.95□□□□□ -1.46
BRF2Q9HAW0 AL359976.1-201ENST00000418655 3528 ntBASIC5.95□□□□□ -1.46
BRF2Q9HAW0 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC5.95□□□□□ -1.46
BRF2Q9HAW0 AC104463.2-201ENST00000428573 314 ntTSL 5 BASIC5.95□□□□□ -1.46
BRF2Q9HAW0 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC5.95□□□□□ -1.46
BRF2Q9HAW0 AL390879.1-201ENST00000439143 386 ntBASIC5.95□□□□□ -1.46
BRF2Q9HAW0 GAPDHP23-201ENST00000444823 993 ntBASIC5.95□□□□□ -1.46
BRF2Q9HAW0 RPS15AP29-201ENST00000445539 400 ntBASIC5.95□□□□□ -1.46
BRF2Q9HAW0 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
BRF2Q9HAW0 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC5.95□□□□□ -1.46
BRF2Q9HAW0 AL354989.1-201ENST00000448245 635 ntTSL 3 BASIC5.95□□□□□ -1.46
BRF2Q9HAW0 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC5.95□□□□□ -1.46
BRF2Q9HAW0 AC112187.1-201ENST00000455837 479 ntBASIC5.95□□□□□ -1.46
BRF2Q9HAW0 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
BRF2Q9HAW0 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC5.95□□□□□ -1.46
BRF2Q9HAW0 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC5.95□□□□□ -1.46
BRF2Q9HAW0 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC5.95□□□□□ -1.46
BRF2Q9HAW0 SNX18P24-201ENST00000505249 671 ntBASIC5.95□□□□□ -1.46
BRF2Q9HAW0 AC021151.1-201ENST00000506933 183 ntTSL 3 BASIC5.95□□□□□ -1.46
BRF2Q9HAW0 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC5.95□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 79.3 ms