Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 AL031767.1-201ENST00000426374 386 ntTSL 5 BASIC5.68□□□□□ -1.5
COL21A1Q96P44 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC5.68□□□□□ -1.5
COL21A1Q96P44 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC5.68□□□□□ -1.5
COL21A1Q96P44 RPL5P7-201ENST00000444235 813 ntBASIC5.68□□□□□ -1.5
COL21A1Q96P44 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC5.68□□□□□ -1.5
COL21A1Q96P44 OSTCP1-201ENST00000455507 450 ntBASIC5.68□□□□□ -1.5
COL21A1Q96P44 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC5.68□□□□□ -1.5
COL21A1Q96P44 AC019084.1-201ENST00000457337 432 ntBASIC5.68□□□□□ -1.5
COL21A1Q96P44 NUCB2-202ENST00000458064 1279 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
COL21A1Q96P44 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC5.68□□□□□ -1.5
COL21A1Q96P44 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC5.68□□□□□ -1.5
COL21A1Q96P44 APOBEC3AP1-201ENST00000511396 287 ntBASIC5.68□□□□□ -1.5
COL21A1Q96P44 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC5.68□□□□□ -1.5
COL21A1Q96P44 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC5.68□□□□□ -1.5
COL21A1Q96P44 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC5.68□□□□□ -1.5
COL21A1Q96P44 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC5.68□□□□□ -1.5
COL21A1Q96P44 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC5.68□□□□□ -1.5
COL21A1Q96P44 AC130365.2-201ENST00000525882 1201 ntBASIC5.68□□□□□ -1.5
COL21A1Q96P44 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC5.68□□□□□ -1.5
COL21A1Q96P44 LDHC-203ENST00000535809 757 ntTSL 5 BASIC5.68□□□□□ -1.5
COL21A1Q96P44 OLR1-210ENST00000544577 924 ntTSL 5 BASIC5.68□□□□□ -1.5
COL21A1Q96P44 AC145285.4-201ENST00000568183 540 ntTSL 3 BASIC5.68□□□□□ -1.5
COL21A1Q96P44 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC5.68□□□□□ -1.5
COL21A1Q96P44 MRPS21P8-201ENST00000569196 235 ntBASIC5.68□□□□□ -1.5
COL21A1Q96P44 MIR4502-201ENST00000580432 81 ntBASIC5.68□□□□□ -1.5
COL21A1Q96P44 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC5.68□□□□□ -1.5
COL21A1Q96P44 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC5.68□□□□□ -1.5
COL21A1Q96P44 AC092681.3-201ENST00000609463 678 ntBASIC5.68□□□□□ -1.5
COL21A1Q96P44 AL591926.1-201ENST00000620542 217 ntBASIC5.68□□□□□ -1.5
COL21A1Q96P44 AL683826.1-201ENST00000624104 627 ntBASIC5.68□□□□□ -1.5
COL21A1Q96P44 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
COL21A1Q96P44 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC5.68□□□□□ -1.5
COL21A1Q96P44 MAPK10-350ENST00000641777 965 ntBASIC5.68□□□□□ -1.5
COL21A1Q96P44 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
COL21A1Q96P44 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC5.68□□□□□ -1.5
COL21A1Q96P44 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
COL21A1Q96P44 RPS2P45-201ENST00000469997 2057 ntBASIC5.68□□□□□ -1.5
COL21A1Q96P44 AC018717.1-201ENST00000457712 1505 ntBASIC5.68□□□□□ -1.5
COL21A1Q96P44 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
COL21A1Q96P44 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
COL21A1Q96P44 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC5.68□□□□□ -1.5
COL21A1Q96P44 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
COL21A1Q96P44 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
COL21A1Q96P44 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
COL21A1Q96P44 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC5.67□□□□□ -1.5
COL21A1Q96P44 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.67□□□□□ -1.5
COL21A1Q96P44 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC5.67□□□□□ -1.5
COL21A1Q96P44 MTND5P12-201ENST00000502851 1449 ntBASIC5.67□□□□□ -1.5
COL21A1Q96P44 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC5.67□□□□□ -1.5
COL21A1Q96P44 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
COL21A1Q96P44 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
COL21A1Q96P44 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC5.67□□□□□ -1.5
COL21A1Q96P44 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC5.67□□□□□ -1.5
COL21A1Q96P44 GCNT1P4-201ENST00000404096 329 ntBASIC5.67□□□□□ -1.5
COL21A1Q96P44 AC099535.1-201ENST00000408928 371 ntBASIC5.67□□□□□ -1.5
COL21A1Q96P44 RPSAP65-201ENST00000429660 595 ntBASIC5.67□□□□□ -1.5
COL21A1Q96P44 USP24P1-201ENST00000433802 779 ntBASIC5.67□□□□□ -1.5
COL21A1Q96P44 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
COL21A1Q96P44 RPL23AP60-201ENST00000450011 454 ntBASIC5.67□□□□□ -1.5
COL21A1Q96P44 OR52I1-201ENST00000450052 1050 ntBASIC5.67□□□□□ -1.5
COL21A1Q96P44 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC5.67□□□□□ -1.5
COL21A1Q96P44 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC5.67□□□□□ -1.5
COL21A1Q96P44 AC104339.1-201ENST00000465478 348 ntBASIC5.67□□□□□ -1.5
COL21A1Q96P44 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC5.67□□□□□ -1.5
COL21A1Q96P44 PFN2-209ENST00000481275 560 ntTSL 4 BASIC5.67□□□□□ -1.5
COL21A1Q96P44 AC097486.1-201ENST00000515331 210 ntBASIC5.67□□□□□ -1.5
COL21A1Q96P44 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC5.67□□□□□ -1.5
COL21A1Q96P44 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
COL21A1Q96P44 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC5.67□□□□□ -1.5
COL21A1Q96P44 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC5.67□□□□□ -1.5
COL21A1Q96P44 AP000619.2-201ENST00000546014 969 ntBASIC5.67□□□□□ -1.5
COL21A1Q96P44 AL049829.2-201ENST00000554010 285 ntTSL 3 BASIC5.67□□□□□ -1.5
COL21A1Q96P44 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC5.67□□□□□ -1.5
COL21A1Q96P44 MIR4701-201ENST00000583094 63 ntBASIC5.67□□□□□ -1.5
COL21A1Q96P44 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC5.67□□□□□ -1.5
COL21A1Q96P44 MIR7109-201ENST00000613748 65 ntBASIC5.67□□□□□ -1.5
COL21A1Q96P44 RFPL4AP6-201ENST00000616792 846 ntBASIC5.67□□□□□ -1.5
COL21A1Q96P44 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
COL21A1Q96P44 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC5.67□□□□□ -1.5
COL21A1Q96P44 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC5.67□□□□□ -1.5
COL21A1Q96P44 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC5.67□□□□□ -1.5
COL21A1Q96P44 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC5.67□□□□□ -1.5
COL21A1Q96P44 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC5.67□□□□□ -1.5
COL21A1Q96P44 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC5.67□□□□□ -1.5
COL21A1Q96P44 SAMM50P1-201ENST00000455403 1399 ntBASIC5.67□□□□□ -1.5
COL21A1Q96P44 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC5.66□□□□□ -1.5
COL21A1Q96P44 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
COL21A1Q96P44 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
COL21A1Q96P44 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC5.66□□□□□ -1.5
COL21A1Q96P44 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
COL21A1Q96P44 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
COL21A1Q96P44 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
COL21A1Q96P44 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
COL21A1Q96P44 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
COL21A1Q96P44 CASC19-260ENST00000641828 2001 ntBASIC5.66□□□□□ -1.5
COL21A1Q96P44 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
COL21A1Q96P44 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
COL21A1Q96P44 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC5.66□□□□□ -1.5
COL21A1Q96P44 SNORA21-201ENST00000362423 132 ntBASIC5.66□□□□□ -1.5
COL21A1Q96P44 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 112.3 ms