Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 ACA64.4-201ENST00000459070 127 ntBASIC6.16□□□□□ -1.42
C9orf72Q96LT7 CCDC11P1-201ENST00000503137 1162 ntBASIC6.16□□□□□ -1.42
C9orf72Q96LT7 RN7SKP288-201ENST00000516227 268 ntBASIC6.16□□□□□ -1.42
C9orf72Q96LT7 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC6.16□□□□□ -1.42
C9orf72Q96LT7 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC6.16□□□□□ -1.42
C9orf72Q96LT7 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC6.16□□□□□ -1.42
C9orf72Q96LT7 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC6.16□□□□□ -1.42
C9orf72Q96LT7 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC6.16□□□□□ -1.42
C9orf72Q96LT7 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC6.16□□□□□ -1.42
C9orf72Q96LT7 uc_338.26-201ENST00000612659 160 ntBASIC6.16□□□□□ -1.42
C9orf72Q96LT7 MIR1910-201ENST00000636955 80 ntBASIC6.16□□□□□ -1.42
C9orf72Q96LT7 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC6.16□□□□□ -1.42
C9orf72Q96LT7 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC6.16□□□□□ -1.42
C9orf72Q96LT7 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
C9orf72Q96LT7 NSF-206ENST00000575068 2667 ntTSL 2 BASIC6.16□□□□□ -1.42
C9orf72Q96LT7 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC6.16□□□□□ -1.42
C9orf72Q96LT7 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC6.16□□□□□ -1.42
C9orf72Q96LT7 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
C9orf72Q96LT7 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
C9orf72Q96LT7 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
C9orf72Q96LT7 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
C9orf72Q96LT7 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
C9orf72Q96LT7 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
C9orf72Q96LT7 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC6.15□□□□□ -1.42
C9orf72Q96LT7 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
C9orf72Q96LT7 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
C9orf72Q96LT7 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC6.15□□□□□ -1.42
C9orf72Q96LT7 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
C9orf72Q96LT7 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
C9orf72Q96LT7 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
C9orf72Q96LT7 RNA5SP433-201ENST00000364491 114 ntBASIC6.15□□□□□ -1.42
C9orf72Q96LT7 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
C9orf72Q96LT7 MIR1282-201ENST00000408865 101 ntBASIC6.15□□□□□ -1.42
C9orf72Q96LT7 RN7SKP166-201ENST00000410812 305 ntBASIC6.15□□□□□ -1.42
C9orf72Q96LT7 AC245096.1-201ENST00000413104 546 ntBASIC6.15□□□□□ -1.42
C9orf72Q96LT7 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC6.15□□□□□ -1.42
C9orf72Q96LT7 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC6.15□□□□□ -1.42
C9orf72Q96LT7 FTO-202ENST00000431610 707 ntTSL 3 BASIC6.15□□□□□ -1.42
C9orf72Q96LT7 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC6.15□□□□□ -1.42
C9orf72Q96LT7 AC069154.1-201ENST00000432914 542 ntBASIC6.15□□□□□ -1.42
C9orf72Q96LT7 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC6.15□□□□□ -1.42
C9orf72Q96LT7 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC6.15□□□□□ -1.42
C9orf72Q96LT7 KRTAP2-5P-201ENST00000446109 396 ntBASIC6.15□□□□□ -1.42
C9orf72Q96LT7 AP002453.1-201ENST00000492327 668 ntBASIC6.15□□□□□ -1.42
C9orf72Q96LT7 snoU109.5-201ENST00000516231 132 ntBASIC6.15□□□□□ -1.42
C9orf72Q96LT7 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC6.15□□□□□ -1.42
C9orf72Q96LT7 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC6.15□□□□□ -1.42
C9orf72Q96LT7 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC6.15□□□□□ -1.42
C9orf72Q96LT7 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC6.15□□□□□ -1.42
C9orf72Q96LT7 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC6.15□□□□□ -1.42
C9orf72Q96LT7 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC6.15□□□□□ -1.42
C9orf72Q96LT7 AC079315.1-201ENST00000602952 623 ntBASIC6.15□□□□□ -1.42
C9orf72Q96LT7 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.43
C9orf72Q96LT7 EIF3EP1-201ENST00000433978 1316 ntBASIC6.15□□□□□ -1.43
C9orf72Q96LT7 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC6.15□□□□□ -1.43
C9orf72Q96LT7 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC6.15□□□□□ -1.43
C9orf72Q96LT7 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC6.15□□□□□ -1.43
C9orf72Q96LT7 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC6.15□□□□□ -1.43
C9orf72Q96LT7 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC6.15□□□□□ -1.43
C9orf72Q96LT7 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
C9orf72Q96LT7 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
C9orf72Q96LT7 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
C9orf72Q96LT7 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
C9orf72Q96LT7 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
C9orf72Q96LT7 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
C9orf72Q96LT7 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
C9orf72Q96LT7 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
C9orf72Q96LT7 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
C9orf72Q96LT7 AC140134.1-201ENST00000511830 3544 ntBASIC6.14□□□□□ -1.43
C9orf72Q96LT7 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
C9orf72Q96LT7 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC6.14□□□□□ -1.43
C9orf72Q96LT7 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC6.14□□□□□ -1.43
C9orf72Q96LT7 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC6.14□□□□□ -1.43
C9orf72Q96LT7 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
C9orf72Q96LT7 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC6.14□□□□□ -1.43
C9orf72Q96LT7 U3.10-201ENST00000364459 214 ntBASIC6.14□□□□□ -1.43
C9orf72Q96LT7 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
C9orf72Q96LT7 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC6.14□□□□□ -1.43
C9orf72Q96LT7 ATP5A1P8-201ENST00000423669 1291 ntBASIC6.14□□□□□ -1.43
C9orf72Q96LT7 LINC01593-201ENST00000424355 388 ntTSL 5 BASIC6.14□□□□□ -1.43
C9orf72Q96LT7 CCNB1IP1P1-201ENST00000428976 839 ntBASIC6.14□□□□□ -1.43
C9orf72Q96LT7 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC6.14□□□□□ -1.43
C9orf72Q96LT7 AC010240.2-201ENST00000445363 1205 ntBASIC6.14□□□□□ -1.43
C9orf72Q96LT7 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
C9orf72Q96LT7 HIGD1AP16-201ENST00000450986 258 ntBASIC6.14□□□□□ -1.43
C9orf72Q96LT7 Z83838.1-202ENST00000456225 839 ntBASIC6.14□□□□□ -1.43
C9orf72Q96LT7 KDELR2-206ENST00000490996 655 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
C9orf72Q96LT7 RN7SL104P-201ENST00000498686 293 ntBASIC6.14□□□□□ -1.43
C9orf72Q96LT7 KHDC1P1-201ENST00000511053 508 ntBASIC6.14□□□□□ -1.43
C9orf72Q96LT7 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC6.14□□□□□ -1.43
C9orf72Q96LT7 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC6.14□□□□□ -1.43
C9orf72Q96LT7 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
C9orf72Q96LT7 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
C9orf72Q96LT7 MIR4310-201ENST00000582950 57 ntBASIC6.14□□□□□ -1.43
C9orf72Q96LT7 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC6.14□□□□□ -1.43
C9orf72Q96LT7 AC025262.3-201ENST00000623666 360 ntBASIC6.14□□□□□ -1.43
C9orf72Q96LT7 AC073488.6-201ENST00000632293 754 ntBASIC6.14□□□□□ -1.43
C9orf72Q96LT7 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC6.14□□□□□ -1.43
C9orf72Q96LT7 AC239868.2-201ENST00000564237 4527 ntBASIC6.14□□□□□ -1.43
C9orf72Q96LT7 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms