Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 LINC02384-202ENST00000441255 567 ntTSL 4 BASIC6.28□□□□□ -1.4
VPS50Q96JG6 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC6.28□□□□□ -1.4
VPS50Q96JG6 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC6.28□□□□□ -1.4
VPS50Q96JG6 AC234771.2-201ENST00000445718 597 ntBASIC6.28□□□□□ -1.4
VPS50Q96JG6 RPL23AP28-201ENST00000448062 470 ntBASIC6.28□□□□□ -1.4
VPS50Q96JG6 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC6.28□□□□□ -1.4
VPS50Q96JG6 OR52E7P-201ENST00000452394 933 ntBASIC6.28□□□□□ -1.4
VPS50Q96JG6 RPL26P30-201ENST00000453533 435 ntBASIC6.28□□□□□ -1.4
VPS50Q96JG6 AL035443.1-201ENST00000456631 304 ntTSL 3 BASIC6.28□□□□□ -1.4
VPS50Q96JG6 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC6.28□□□□□ -1.4
VPS50Q96JG6 AC092902.1-201ENST00000486999 259 ntBASIC6.28□□□□□ -1.4
VPS50Q96JG6 RPS27P20-201ENST00000492051 246 ntBASIC6.28□□□□□ -1.4
VPS50Q96JG6 AC104078.2-201ENST00000504344 541 ntTSL 5 BASIC6.28□□□□□ -1.4
VPS50Q96JG6 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC6.28□□□□□ -1.4
VPS50Q96JG6 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC6.28□□□□□ -1.4
VPS50Q96JG6 AC011396.2-201ENST00000515598 582 ntTSL 3 BASIC6.28□□□□□ -1.4
VPS50Q96JG6 RN7SKP70-201ENST00000516655 271 ntBASIC6.28□□□□□ -1.4
VPS50Q96JG6 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC6.28□□□□□ -1.4
VPS50Q96JG6 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
VPS50Q96JG6 TDGP1-201ENST00000543961 1229 ntBASIC6.28□□□□□ -1.4
VPS50Q96JG6 AL445383.1-201ENST00000554689 874 ntBASIC6.28□□□□□ -1.4
VPS50Q96JG6 AC009269.5-201ENST00000557800 755 ntTSL 3 BASIC6.28□□□□□ -1.4
VPS50Q96JG6 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC6.28□□□□□ -1.4
VPS50Q96JG6 OSTC-205ENST00000613215 876 ntTSL 2 BASIC6.28□□□□□ -1.4
VPS50Q96JG6 GAPDHP41-201ENST00000613707 975 ntBASIC6.28□□□□□ -1.4
VPS50Q96JG6 MIR7109-201ENST00000613748 65 ntBASIC6.28□□□□□ -1.4
VPS50Q96JG6 AL445649.1-201ENST00000615941 691 ntBASIC6.28□□□□□ -1.4
VPS50Q96JG6 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC6.28□□□□□ -1.4
VPS50Q96JG6 OR51B2-201ENST00000624187 939 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
VPS50Q96JG6 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC6.28□□□□□ -1.4
VPS50Q96JG6 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC6.28□□□□□ -1.4
VPS50Q96JG6 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC6.28□□□□□ -1.4
VPS50Q96JG6 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
VPS50Q96JG6 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
VPS50Q96JG6 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC6.28□□□□□ -1.4
VPS50Q96JG6 AC092724.1-201ENST00000624623 3397 ntBASIC6.28□□□□□ -1.4
VPS50Q96JG6 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC6.28□□□□□ -1.4
VPS50Q96JG6 EEF1A1P24-201ENST00000451469 1378 ntBASIC6.28□□□□□ -1.4
VPS50Q96JG6 AC119674.1-213ENST00000641177 1386 ntBASIC6.28□□□□□ -1.4
VPS50Q96JG6 AC093671.1-201ENST00000624981 2929 ntBASIC6.28□□□□□ -1.4
VPS50Q96JG6 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC6.28□□□□□ -1.4
VPS50Q96JG6 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC6.27□□□□□ -1.4
VPS50Q96JG6 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
VPS50Q96JG6 PSMC1P4-201ENST00000515236 1327 ntBASIC6.27□□□□□ -1.41
VPS50Q96JG6 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
VPS50Q96JG6 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC6.27□□□□□ -1.41
VPS50Q96JG6 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
VPS50Q96JG6 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC6.27□□□□□ -1.41
VPS50Q96JG6 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
VPS50Q96JG6 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
VPS50Q96JG6 AC005725.1-201ENST00000577346 2607 ntBASIC6.27□□□□□ -1.41
VPS50Q96JG6 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
VPS50Q96JG6 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
VPS50Q96JG6 OR1Q1-201ENST00000297913 945 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
VPS50Q96JG6 RNA5SP485-201ENST00000365053 119 ntBASIC6.27□□□□□ -1.41
VPS50Q96JG6 SNORA64.3-201ENST00000365647 134 ntBASIC6.27□□□□□ -1.41
VPS50Q96JG6 NOX1-203ENST00000372964 661 ntTSL 2 BASIC6.27□□□□□ -1.41
VPS50Q96JG6 AC245036.1-201ENST00000391727 309 ntBASIC6.27□□□□□ -1.41
VPS50Q96JG6 OOSP1-201ENST00000398992 1270 ntBASIC6.27□□□□□ -1.41
VPS50Q96JG6 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC6.27□□□□□ -1.41
VPS50Q96JG6 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC6.27□□□□□ -1.41
VPS50Q96JG6 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC6.27□□□□□ -1.41
VPS50Q96JG6 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC6.27□□□□□ -1.41
VPS50Q96JG6 AL360013.1-201ENST00000419031 858 ntBASIC6.27□□□□□ -1.41
VPS50Q96JG6 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC6.27□□□□□ -1.41
VPS50Q96JG6 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC6.27□□□□□ -1.41
VPS50Q96JG6 AL139184.1-202ENST00000422303 222 ntBASIC6.27□□□□□ -1.41
VPS50Q96JG6 AC007179.2-206ENST00000434611 467 ntTSL 3 BASIC6.27□□□□□ -1.41
VPS50Q96JG6 AC068888.2-201ENST00000435621 536 ntTSL 3 BASIC6.27□□□□□ -1.41
VPS50Q96JG6 AC128677.1-201ENST00000436016 442 ntBASIC6.27□□□□□ -1.41
VPS50Q96JG6 FBXW12-203ENST00000436231 1117 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
VPS50Q96JG6 LMCD1-AS1-202ENST00000439407 576 ntTSL 4 BASIC6.27□□□□□ -1.41
VPS50Q96JG6 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC6.27□□□□□ -1.41
VPS50Q96JG6 RNF2P1-201ENST00000442955 1010 ntBASIC6.27□□□□□ -1.41
VPS50Q96JG6 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC6.27□□□□□ -1.41
VPS50Q96JG6 RN7SL168P-201ENST00000463821 279 ntBASIC6.27□□□□□ -1.41
VPS50Q96JG6 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
VPS50Q96JG6 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
VPS50Q96JG6 RPL24-206ENST00000495401 478 ntTSL 2 BASIC6.27□□□□□ -1.41
VPS50Q96JG6 NPM1P27-201ENST00000502784 830 ntBASIC6.27□□□□□ -1.41
VPS50Q96JG6 AC027338.1-201ENST00000514840 825 ntBASIC6.27□□□□□ -1.41
VPS50Q96JG6 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC6.27□□□□□ -1.41
VPS50Q96JG6 KCTD9P6-201ENST00000522306 950 ntBASIC6.27□□□□□ -1.41
VPS50Q96JG6 AP005639.1-201ENST00000526939 192 ntBASIC6.27□□□□□ -1.41
VPS50Q96JG6 AC140063.1-201ENST00000541343 259 ntBASIC6.27□□□□□ -1.41
VPS50Q96JG6 OR11H12-201ENST00000550708 1085 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
VPS50Q96JG6 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
VPS50Q96JG6 AC025283.1-201ENST00000572039 734 ntBASIC6.27□□□□□ -1.41
VPS50Q96JG6 BNIP3P40-201ENST00000596017 556 ntBASIC6.27□□□□□ -1.41
VPS50Q96JG6 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC6.27□□□□□ -1.41
VPS50Q96JG6 BNIP3P31-201ENST00000604515 566 ntBASIC6.27□□□□□ -1.41
VPS50Q96JG6 AC114477.1-201ENST00000605097 605 ntBASIC6.27□□□□□ -1.41
VPS50Q96JG6 AC007100.1-201ENST00000606382 478 ntTSL 5 BASIC6.27□□□□□ -1.41
VPS50Q96JG6 AC084036.1-201ENST00000609190 508 ntBASIC6.27□□□□□ -1.41
VPS50Q96JG6 AL589743.6-201ENST00000611025 117 ntBASIC6.27□□□□□ -1.41
VPS50Q96JG6 AL136097.3-201ENST00000611097 505 ntBASIC6.27□□□□□ -1.41
VPS50Q96JG6 AC074276.2-201ENST00000619891 348 ntBASIC6.27□□□□□ -1.41
VPS50Q96JG6 AC023510.2-201ENST00000622162 746 ntBASIC6.27□□□□□ -1.41
VPS50Q96JG6 AL596275.2-207ENST00000641188 675 ntBASIC6.27□□□□□ -1.41
VPS50Q96JG6 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms