Protein–RNA interactions for Protein: Q8WV48

CCDC107, Coiled-coil domain-containing protein 107, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107Q8WV48 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
CCDC107Q8WV48 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.35□□□□□ -1.55
CCDC107Q8WV48 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC5.34□□□□□ -1.55
CCDC107Q8WV48 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC5.34□□□□□ -1.55
CCDC107Q8WV48 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.34□□□□□ -1.55
CCDC107Q8WV48 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.34□□□□□ -1.55
CCDC107Q8WV48 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
CCDC107Q8WV48 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CCDC107Q8WV48 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CCDC107Q8WV48 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CCDC107Q8WV48 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CCDC107Q8WV48 CASP5-201ENST00000260315 1414 ntTSL 5 BASIC5.34□□□□□ -1.55
CCDC107Q8WV48 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CCDC107Q8WV48 AC092451.3-201ENST00000625067 1343 ntBASIC5.34□□□□□ -1.55
CCDC107Q8WV48 MRPL47-201ENST00000259038 1126 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CCDC107Q8WV48 MIR133A2-201ENST00000347538 102 ntBASIC5.34□□□□□ -1.55
CCDC107Q8WV48 SNORD35A-201ENST00000363389 86 ntBASIC5.34□□□□□ -1.55
CCDC107Q8WV48 AL353625.1-202ENST00000366273 571 ntBASIC5.34□□□□□ -1.55
CCDC107Q8WV48 AC074375.1-201ENST00000372993 192 ntBASIC5.34□□□□□ -1.55
CCDC107Q8WV48 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CCDC107Q8WV48 AL391419.1-201ENST00000398901 1275 ntBASIC5.34□□□□□ -1.55
CCDC107Q8WV48 RNA5SP155-201ENST00000411154 129 ntBASIC5.34□□□□□ -1.55
CCDC107Q8WV48 LINC00354-201ENST00000412119 347 ntTSL 5 BASIC5.34□□□□□ -1.55
CCDC107Q8WV48 AC006509.1-201ENST00000420788 634 ntBASIC5.34□□□□□ -1.55
CCDC107Q8WV48 AL589794.1-201ENST00000424971 390 ntBASIC5.34□□□□□ -1.55
CCDC107Q8WV48 MTCO3P43-201ENST00000440974 771 ntBASIC5.34□□□□□ -1.55
CCDC107Q8WV48 SEPT14P12-201ENST00000442280 560 ntBASIC5.34□□□□□ -1.55
CCDC107Q8WV48 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC5.34□□□□□ -1.55
CCDC107Q8WV48 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CCDC107Q8WV48 RPS27AP3-201ENST00000453803 454 ntBASIC5.34□□□□□ -1.55
CCDC107Q8WV48 AL354872.1-201ENST00000456361 967 ntBASIC5.34□□□□□ -1.55
CCDC107Q8WV48 AL079303.1-201ENST00000486611 463 ntBASIC5.34□□□□□ -1.55
CCDC107Q8WV48 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC5.34□□□□□ -1.55
CCDC107Q8WV48 RPL37AP8-201ENST00000494116 276 ntBASIC5.34□□□□□ -1.55
CCDC107Q8WV48 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC5.34□□□□□ -1.55
CCDC107Q8WV48 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CCDC107Q8WV48 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
CCDC107Q8WV48 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC5.34□□□□□ -1.55
CCDC107Q8WV48 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
CCDC107Q8WV48 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC5.34□□□□□ -1.55
CCDC107Q8WV48 AL133163.3-201ENST00000556448 504 ntTSL 5 BASIC5.34□□□□□ -1.55
CCDC107Q8WV48 OR4C49P-201ENST00000563891 900 ntBASIC5.34□□□□□ -1.55
CCDC107Q8WV48 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC5.34□□□□□ -1.55
CCDC107Q8WV48 LINC02259-202ENST00000565543 438 ntTSL 2 BASIC5.34□□□□□ -1.55
CCDC107Q8WV48 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.34□□□□□ -1.55
CCDC107Q8WV48 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC5.34□□□□□ -1.55
CCDC107Q8WV48 AL512430.4-201ENST00000603085 613 ntBASIC5.34□□□□□ -1.55
CCDC107Q8WV48 AC004890.3-201ENST00000605566 1095 ntBASIC5.34□□□□□ -1.55
CCDC107Q8WV48 MIR6849-201ENST00000618543 69 ntBASIC5.34□□□□□ -1.55
CCDC107Q8WV48 AC027506.1-201ENST00000621395 198 ntBASIC5.34□□□□□ -1.55
CCDC107Q8WV48 AC003992.1-201ENST00000635364 557 ntBASIC5.34□□□□□ -1.55
CCDC107Q8WV48 AC091948.2-201ENST00000636510 279 ntBASIC5.34□□□□□ -1.55
CCDC107Q8WV48 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC5.34□□□□□ -1.55
CCDC107Q8WV48 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CCDC107Q8WV48 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CCDC107Q8WV48 AC096921.2-201ENST00000561507 1916 ntBASIC5.34□□□□□ -1.55
CCDC107Q8WV48 SMG1P5-202ENST00000529428 4219 ntBASIC5.34□□□□□ -1.55
CCDC107Q8WV48 SMG1P2-201ENST00000566127 4221 ntBASIC5.34□□□□□ -1.55
CCDC107Q8WV48 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC5.34□□□□□ -1.55
CCDC107Q8WV48 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CCDC107Q8WV48 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
CCDC107Q8WV48 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
CCDC107Q8WV48 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC5.34□□□□□ -1.56
CCDC107Q8WV48 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.56
CCDC107Q8WV48 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
CCDC107Q8WV48 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC5.33□□□□□ -1.56
CCDC107Q8WV48 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
CCDC107Q8WV48 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CCDC107Q8WV48 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CCDC107Q8WV48 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CCDC107Q8WV48 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
CCDC107Q8WV48 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC5.33□□□□□ -1.56
CCDC107Q8WV48 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CCDC107Q8WV48 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
CCDC107Q8WV48 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
CCDC107Q8WV48 RNA5SP453-201ENST00000362503 119 ntBASIC5.33□□□□□ -1.56
CCDC107Q8WV48 AC092634.1-201ENST00000366505 199 ntBASIC5.33□□□□□ -1.56
CCDC107Q8WV48 TINAG-202ENST00000370864 692 ntTSL 2 BASIC5.33□□□□□ -1.56
CCDC107Q8WV48 MRPS6P2-201ENST00000381143 370 ntBASIC5.33□□□□□ -1.56
CCDC107Q8WV48 MIR433-201ENST00000384837 93 ntBASIC5.33□□□□□ -1.56
CCDC107Q8WV48 MIR431-201ENST00000385266 114 ntBASIC5.33□□□□□ -1.56
CCDC107Q8WV48 AC019178.1-201ENST00000392337 440 ntBASIC5.33□□□□□ -1.56
CCDC107Q8WV48 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC5.33□□□□□ -1.56
CCDC107Q8WV48 CBX1P3-201ENST00000413296 527 ntBASIC5.33□□□□□ -1.56
CCDC107Q8WV48 AC017078.1-201ENST00000416146 368 ntBASIC5.33□□□□□ -1.56
CCDC107Q8WV48 AL391811.1-201ENST00000416908 423 ntTSL 3 BASIC5.33□□□□□ -1.56
CCDC107Q8WV48 AL356806.1-201ENST00000422524 916 ntBASIC5.33□□□□□ -1.56
CCDC107Q8WV48 AL157884.1-201ENST00000424561 454 ntBASIC5.33□□□□□ -1.56
CCDC107Q8WV48 ZRANB2-AS1-201ENST00000426999 607 ntTSL 3 BASIC5.33□□□□□ -1.56
CCDC107Q8WV48 MTCO1P51-201ENST00000427672 1060 ntBASIC5.33□□□□□ -1.56
CCDC107Q8WV48 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC5.33□□□□□ -1.56
CCDC107Q8WV48 HGF-207ENST00000453018 721 ntTSL 3 BASIC5.33□□□□□ -1.56
CCDC107Q8WV48 VPS25P1-201ENST00000455691 508 ntBASIC5.33□□□□□ -1.56
CCDC107Q8WV48 RN7SL284P-201ENST00000498823 275 ntBASIC5.33□□□□□ -1.56
CCDC107Q8WV48 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC5.33□□□□□ -1.56
CCDC107Q8WV48 AC037450.1-201ENST00000518129 647 ntTSL 3 BASIC5.33□□□□□ -1.56
CCDC107Q8WV48 SEC11B-201ENST00000518383 499 ntBASIC5.33□□□□□ -1.56
CCDC107Q8WV48 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC5.33□□□□□ -1.56
CCDC107Q8WV48 SLC25A51P2-201ENST00000535708 889 ntBASIC5.33□□□□□ -1.56
CCDC107Q8WV48 AC006065.4-204ENST00000537478 654 ntTSL 2 BASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 95.6 ms