Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 MIR4776-2-201ENST00000580204 80 ntBASIC6.31□□□□□ -1.4
LMO3Q8TAP4 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC6.31□□□□□ -1.4
LMO3Q8TAP4 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC6.31□□□□□ -1.4
LMO3Q8TAP4 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC6.31□□□□□ -1.4
LMO3Q8TAP4 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC6.31□□□□□ -1.4
LMO3Q8TAP4 MIR6793-201ENST00000612376 63 ntBASIC6.31□□□□□ -1.4
LMO3Q8TAP4 AC024884.1-201ENST00000620583 399 ntBASIC6.31□□□□□ -1.4
LMO3Q8TAP4 AL391262.2-201ENST00000622466 494 ntBASIC6.31□□□□□ -1.4
LMO3Q8TAP4 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC6.31□□□□□ -1.4
LMO3Q8TAP4 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC6.31□□□□□ -1.4
LMO3Q8TAP4 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC6.31□□□□□ -1.4
LMO3Q8TAP4 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC6.31□□□□□ -1.4
LMO3Q8TAP4 AL359955.1-201ENST00000455242 3275 ntBASIC6.31□□□□□ -1.4
LMO3Q8TAP4 AP000547.3-204ENST00000588548 2523 ntBASIC6.31□□□□□ -1.4
LMO3Q8TAP4 SNX18P3-202ENST00000565670 1750 ntBASIC6.31□□□□□ -1.4
LMO3Q8TAP4 AC007159.1-201ENST00000566529 4706 ntBASIC6.31□□□□□ -1.4
LMO3Q8TAP4 CASC19-238ENST00000641523 1558 ntBASIC6.31□□□□□ -1.4
LMO3Q8TAP4 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
LMO3Q8TAP4 SELE-205ENST00000367777 3576 ntTSL 5 BASIC6.31□□□□□ -1.4
LMO3Q8TAP4 AC027088.4-201ENST00000611559 1947 ntBASIC6.31□□□□□ -1.4
LMO3Q8TAP4 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC6.3□□□□□ -1.4
LMO3Q8TAP4 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
LMO3Q8TAP4 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
LMO3Q8TAP4 AL731532.1-201ENST00000623972 4236 ntBASIC6.3□□□□□ -1.4
LMO3Q8TAP4 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
LMO3Q8TAP4 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
LMO3Q8TAP4 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
LMO3Q8TAP4 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
LMO3Q8TAP4 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
LMO3Q8TAP4 RNU1-150P-201ENST00000362491 162 ntBASIC6.3□□□□□ -1.4
LMO3Q8TAP4 RNA5SP477-201ENST00000362639 119 ntBASIC6.3□□□□□ -1.4
LMO3Q8TAP4 U3.10-201ENST00000364459 214 ntBASIC6.3□□□□□ -1.4
LMO3Q8TAP4 AC240504.1-201ENST00000395709 845 ntBASIC6.3□□□□□ -1.4
LMO3Q8TAP4 RN7SKP29-201ENST00000410957 272 ntBASIC6.3□□□□□ -1.4
LMO3Q8TAP4 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC6.3□□□□□ -1.4
LMO3Q8TAP4 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
LMO3Q8TAP4 HSPE1P27-201ENST00000430808 296 ntBASIC6.3□□□□□ -1.4
LMO3Q8TAP4 AL158850.1-201ENST00000441249 914 ntTSL 3 BASIC6.3□□□□□ -1.4
LMO3Q8TAP4 AC015983.1-201ENST00000441577 373 ntBASIC6.3□□□□□ -1.4
LMO3Q8TAP4 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC6.3□□□□□ -1.4
LMO3Q8TAP4 AC017099.1-201ENST00000448261 1028 ntBASIC6.3□□□□□ -1.4
LMO3Q8TAP4 AC068228.1-201ENST00000461723 211 ntBASIC6.3□□□□□ -1.4
LMO3Q8TAP4 AC093719.1-201ENST00000480427 441 ntBASIC6.3□□□□□ -1.4
LMO3Q8TAP4 PDCL3P4-201ENST00000489621 720 ntBASIC6.3□□□□□ -1.4
LMO3Q8TAP4 RPL37P23-201ENST00000492641 294 ntBASIC6.3□□□□□ -1.4
LMO3Q8TAP4 AC104078.2-201ENST00000504344 541 ntTSL 5 BASIC6.3□□□□□ -1.4
LMO3Q8TAP4 AC122718.2-201ENST00000505325 591 ntBASIC6.3□□□□□ -1.4
LMO3Q8TAP4 SCARNA18.1-201ENST00000516330 83 ntBASIC6.3□□□□□ -1.4
LMO3Q8TAP4 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC6.3□□□□□ -1.4
LMO3Q8TAP4 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC6.3□□□□□ -1.4
LMO3Q8TAP4 AL163952.1-202ENST00000569625 600 ntBASIC6.3□□□□□ -1.4
LMO3Q8TAP4 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC6.3□□□□□ -1.4
LMO3Q8TAP4 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC6.3□□□□□ -1.4
LMO3Q8TAP4 LINC01862-201ENST00000593792 478 ntTSL 2 BASIC6.3□□□□□ -1.4
LMO3Q8TAP4 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC6.3□□□□□ -1.4
LMO3Q8TAP4 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC6.3□□□□□ -1.4
LMO3Q8TAP4 AC093388.1-201ENST00000609166 430 ntBASIC6.3□□□□□ -1.4
LMO3Q8TAP4 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
LMO3Q8TAP4 AC073575.2-201ENST00000614212 627 ntBASIC6.3□□□□□ -1.4
LMO3Q8TAP4 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC6.3□□□□□ -1.4
LMO3Q8TAP4 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC6.3□□□□□ -1.4
LMO3Q8TAP4 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
LMO3Q8TAP4 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
LMO3Q8TAP4 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
LMO3Q8TAP4 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
LMO3Q8TAP4 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
LMO3Q8TAP4 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC6.3□□□□□ -1.4
LMO3Q8TAP4 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC6.3□□□□□ -1.4
LMO3Q8TAP4 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
LMO3Q8TAP4 SULF1-201ENST00000260128 5710 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
LMO3Q8TAP4 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
LMO3Q8TAP4 NAT2-201ENST00000286479 1322 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
LMO3Q8TAP4 AL033543.1-201ENST00000623440 13454 ntBASIC6.29□□□□□ -1.4
LMO3Q8TAP4 LIMCH1-201ENST00000313860 6165 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
LMO3Q8TAP4 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
LMO3Q8TAP4 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
LMO3Q8TAP4 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.29□□□□□ -1.4
LMO3Q8TAP4 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
LMO3Q8TAP4 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC6.29□□□□□ -1.4
LMO3Q8TAP4 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.29□□□□□ -1.4
LMO3Q8TAP4 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.29□□□□□ -1.4
LMO3Q8TAP4 NIT2-201ENST00000394140 7289 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
LMO3Q8TAP4 CRIP1P1-201ENST00000427567 185 ntBASIC6.29□□□□□ -1.4
LMO3Q8TAP4 AC211433.1-202ENST00000434256 1187 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
LMO3Q8TAP4 NDUFS5P5-201ENST00000437256 321 ntBASIC6.29□□□□□ -1.4
LMO3Q8TAP4 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC6.29□□□□□ -1.4
LMO3Q8TAP4 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC6.29□□□□□ -1.4
LMO3Q8TAP4 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC6.29□□□□□ -1.4
LMO3Q8TAP4 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC6.29□□□□□ -1.4
LMO3Q8TAP4 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC6.29□□□□□ -1.4
LMO3Q8TAP4 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC6.29□□□□□ -1.4
LMO3Q8TAP4 WDR11-AS1-201ENST00000451706 1108 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
LMO3Q8TAP4 AC093166.4-201ENST00000457867 318 ntBASIC6.29□□□□□ -1.4
LMO3Q8TAP4 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC6.29□□□□□ -1.4
LMO3Q8TAP4 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
LMO3Q8TAP4 RWDD4P1-201ENST00000488019 565 ntBASIC6.29□□□□□ -1.4
LMO3Q8TAP4 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC6.29□□□□□ -1.4
LMO3Q8TAP4 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
LMO3Q8TAP4 RNA5SP438-201ENST00000516561 112 ntBASIC6.29□□□□□ -1.4
LMO3Q8TAP4 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 94.8 ms