Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC7.54□□□□□ -1.2
DEPDC4Q8N2C3 LRRC28-201ENST00000301981 5971 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
DEPDC4Q8N2C3 MTND4P12-201ENST00000498999 1377 ntBASIC7.54□□□□□ -1.2
DEPDC4Q8N2C3 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC7.54□□□□□ -1.2
DEPDC4Q8N2C3 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC7.54□□□□□ -1.2
DEPDC4Q8N2C3 RBBP5-201ENST00000264515 4404 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
DEPDC4Q8N2C3 AC108463.3-201ENST00000603748 1482 ntBASIC7.54□□□□□ -1.2
DEPDC4Q8N2C3 EHF-201ENST00000257831 3150 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
DEPDC4Q8N2C3 PDE4DIP-206ENST00000369356 8307 ntAPPRIS P4 TSL 1 (best) BASIC7.54□□□□□ -1.2
DEPDC4Q8N2C3 AC093311.1-201ENST00000506586 2021 ntBASIC7.54□□□□□ -1.2
DEPDC4Q8N2C3 EFTUD2-220ENST00000591382 3675 ntAPPRIS P1 TSL 2 BASIC7.54□□□□□ -1.2
DEPDC4Q8N2C3 ZNF462-201ENST00000277225 10414 ntAPPRIS P2 TSL 1 (best) BASIC7.54□□□□□ -1.2
DEPDC4Q8N2C3 RAI14-205ENST00000503673 3339 ntAPPRIS P1 TSL 2 BASIC7.53□□□□□ -1.2
DEPDC4Q8N2C3 KIT-201ENST00000288135 5186 ntAPPRIS P3 TSL 1 (best) BASIC7.53□□□□□ -1.2
DEPDC4Q8N2C3 KIDINS220-201ENST00000256707 7361 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
DEPDC4Q8N2C3 AIMP1-203ENST00000442366 2519 ntAPPRIS P3 TSL 5 BASIC7.53□□□□□ -1.2
DEPDC4Q8N2C3 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC7.53□□□□□ -1.2
DEPDC4Q8N2C3 UBAP2-201ENST00000360802 4284 ntAPPRIS P1 TSL 5 BASIC7.53□□□□□ -1.2
DEPDC4Q8N2C3 UBAP2-204ENST00000379238 4289 ntAPPRIS P1 TSL 5 BASIC7.53□□□□□ -1.2
DEPDC4Q8N2C3 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
DEPDC4Q8N2C3 IL1RAP-201ENST00000072516 4697 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
DEPDC4Q8N2C3 DLG2-209ENST00000418306 3027 ntTSL 2 BASIC7.53□□□□□ -1.2
DEPDC4Q8N2C3 PLD5-203ENST00000427495 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC7.53□□□□□ -1.2
DEPDC4Q8N2C3 CCR6-203ENST00000400926 3216 ntAPPRIS P1 TSL 2 BASIC7.53□□□□□ -1.2
DEPDC4Q8N2C3 NXPE3-207ENST00000616286 1832 ntTSL 5 BASIC7.53□□□□□ -1.2
DEPDC4Q8N2C3 KRBOX1-202ENST00000418176 2566 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
DEPDC4Q8N2C3 MID1-212ENST00000616003 1926 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
DEPDC4Q8N2C3 ADAL-203ENST00000428046 3514 ntTSL 2 BASIC7.53□□□□□ -1.2
DEPDC4Q8N2C3 PVALB-201ENST00000216200 595 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
DEPDC4Q8N2C3 CBX3P1-201ENST00000325243 554 ntBASIC7.53□□□□□ -1.2
DEPDC4Q8N2C3 RNA5SP145-201ENST00000363124 125 ntBASIC7.53□□□□□ -1.2
DEPDC4Q8N2C3 Y_RNA.209-201ENST00000364156 111 ntBASIC7.53□□□□□ -1.2
DEPDC4Q8N2C3 SNORA62.2-201ENST00000364672 152 ntBASIC7.53□□□□□ -1.2
DEPDC4Q8N2C3 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC7.53□□□□□ -1.2
DEPDC4Q8N2C3 RN7SKP152-201ENST00000410444 315 ntBASIC7.53□□□□□ -1.2
DEPDC4Q8N2C3 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC7.53□□□□□ -1.2
DEPDC4Q8N2C3 KRT223P-201ENST00000422957 519 ntTSL 2 BASIC7.53□□□□□ -1.2
DEPDC4Q8N2C3 AP000317.1-201ENST00000427022 805 ntTSL 3 BASIC7.53□□□□□ -1.2
DEPDC4Q8N2C3 AC073342.1-201ENST00000427392 592 ntTSL 5 BASIC7.53□□□□□ -1.2
DEPDC4Q8N2C3 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC7.53□□□□□ -1.2
DEPDC4Q8N2C3 PCBP2P1-201ENST00000437262 977 ntBASIC7.53□□□□□ -1.2
DEPDC4Q8N2C3 AL022238.1-201ENST00000442557 355 ntBASIC7.53□□□□□ -1.2
DEPDC4Q8N2C3 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC7.53□□□□□ -1.2
DEPDC4Q8N2C3 AC242426.2-201ENST00000446956 795 ntBASIC7.53□□□□□ -1.2
DEPDC4Q8N2C3 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC7.53□□□□□ -1.2
DEPDC4Q8N2C3 UBDP1-202ENST00000457888 382 ntBASIC7.53□□□□□ -1.2
DEPDC4Q8N2C3 BUB3P1-201ENST00000458451 999 ntBASIC7.53□□□□□ -1.2
DEPDC4Q8N2C3 RPS3AP49-201ENST00000472161 790 ntBASIC7.53□□□□□ -1.2
DEPDC4Q8N2C3 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC7.53□□□□□ -1.2
DEPDC4Q8N2C3 SCG5-206ENST00000494364 1148 ntTSL 5 BASIC7.53□□□□□ -1.2
DEPDC4Q8N2C3 PDCD10-218ENST00000497056 1276 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
DEPDC4Q8N2C3 DUTP7-201ENST00000507982 486 ntBASIC7.53□□□□□ -1.2
DEPDC4Q8N2C3 RPL7L1P13-201ENST00000511702 739 ntBASIC7.53□□□□□ -1.2
DEPDC4Q8N2C3 LINC01094-206ENST00000514130 594 ntTSL 4 BASIC7.53□□□□□ -1.2
DEPDC4Q8N2C3 AC090835.1-201ENST00000515189 1024 ntBASIC7.53□□□□□ -1.2
DEPDC4Q8N2C3 AC109588.1-202ENST00000515720 880 ntTSL 3 BASIC7.53□□□□□ -1.2
DEPDC4Q8N2C3 RNY4P37-201ENST00000516225 96 ntBASIC7.53□□□□□ -1.2
DEPDC4Q8N2C3 AC022778.1-201ENST00000518302 545 ntTSL 3 BASIC7.53□□□□□ -1.2
DEPDC4Q8N2C3 IGHVII-30-1-201ENST00000522218 301 ntBASIC7.53□□□□□ -1.2
DEPDC4Q8N2C3 IGLVI-70-201ENST00000523272 390 ntBASIC7.53□□□□□ -1.2
DEPDC4Q8N2C3 OPRK1-204ENST00000524278 1195 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
DEPDC4Q8N2C3 RASSF8-AS1-204ENST00000535436 1121 ntTSL 4 BASIC7.53□□□□□ -1.2
DEPDC4Q8N2C3 AC073913.2-201ENST00000541512 145 ntBASIC7.53□□□□□ -1.2
DEPDC4Q8N2C3 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC7.53□□□□□ -1.2
DEPDC4Q8N2C3 TAS2R38-201ENST00000547270 1143 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
DEPDC4Q8N2C3 VWA3A-205ENST00000563755 861 ntAPPRIS ALT2 TSL 1 (best) BASIC7.53□□□□□ -1.2
DEPDC4Q8N2C3 ANP32BP1-201ENST00000564205 1297 ntBASIC7.53□□□□□ -1.2
DEPDC4Q8N2C3 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC7.53□□□□□ -1.2
DEPDC4Q8N2C3 AC105275.2-201ENST00000567907 711 ntBASIC7.53□□□□□ -1.2
DEPDC4Q8N2C3 AC009121.2-201ENST00000572913 714 ntTSL 3 BASIC7.53□□□□□ -1.2
DEPDC4Q8N2C3 EIF4A1P9-201ENST00000576035 1207 ntBASIC7.53□□□□□ -1.2
DEPDC4Q8N2C3 PRR13P4-201ENST00000577786 421 ntBASIC7.53□□□□□ -1.2
DEPDC4Q8N2C3 CCDC58P1-201ENST00000578567 430 ntBASIC7.53□□□□□ -1.2
DEPDC4Q8N2C3 AL035417.2-201ENST00000603887 796 ntBASIC7.53□□□□□ -1.2
DEPDC4Q8N2C3 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC7.53□□□□□ -1.2
DEPDC4Q8N2C3 AC009994.1-201ENST00000606889 253 ntBASIC7.53□□□□□ -1.2
DEPDC4Q8N2C3 AC098614.4-201ENST00000607601 462 ntBASIC7.53□□□□□ -1.2
DEPDC4Q8N2C3 RNU6-84P-201ENST00000607737 102 ntBASIC7.53□□□□□ -1.2
DEPDC4Q8N2C3 AC018690.1-201ENST00000608144 626 ntBASIC7.53□□□□□ -1.2
DEPDC4Q8N2C3 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC7.53□□□□□ -1.2
DEPDC4Q8N2C3 AL121757.2-201ENST00000611223 313 ntBASIC7.53□□□□□ -1.2
DEPDC4Q8N2C3 RN7SL82P-201ENST00000611435 237 ntBASIC7.53□□□□□ -1.2
DEPDC4Q8N2C3 uc_338.2-201ENST00000612963 182 ntBASIC7.53□□□□□ -1.2
DEPDC4Q8N2C3 uc_338.33-201ENST00000614988 170 ntBASIC7.53□□□□□ -1.2
DEPDC4Q8N2C3 AC010133.1-201ENST00000615809 842 ntBASIC7.53□□□□□ -1.2
DEPDC4Q8N2C3 AC023509.5-201ENST00000617434 807 ntBASIC7.53□□□□□ -1.2
DEPDC4Q8N2C3 RN7SL628P-201ENST00000619139 237 ntBASIC7.53□□□□□ -1.2
DEPDC4Q8N2C3 MIR6754-201ENST00000621121 66 ntBASIC7.53□□□□□ -1.2
DEPDC4Q8N2C3 BCAT1-206ENST00000539780 1360 ntTSL 2 BASIC7.53□□□□□ -1.2
DEPDC4Q8N2C3 TRPM3-212ENST00000396283 3484 ntTSL 5 BASIC7.53□□□□□ -1.2
DEPDC4Q8N2C3 LINC01128-205ENST00000445118 6606 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
DEPDC4Q8N2C3 KIF1B-201ENST00000263934 6816 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
DEPDC4Q8N2C3 AC095038.1-201ENST00000429248 1591 ntBASIC7.53□□□□□ -1.2
DEPDC4Q8N2C3 AC022306.1-201ENST00000560489 1562 ntBASIC7.53□□□□□ -1.2
DEPDC4Q8N2C3 TFG-204ENST00000476228 1783 ntAPPRIS ALT1 TSL 1 (best) BASIC7.53□□□□□ -1.2
DEPDC4Q8N2C3 OSGEPL1-207ENST00000522700 1779 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
DEPDC4Q8N2C3 TGIF1-223ENST00000618001 3030 ntTSL 2 BASIC7.53□□□□□ -1.2
DEPDC4Q8N2C3 FBXO36-202ENST00000373652 3120 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
DEPDC4Q8N2C3 MAPK10-392ENST00000642103 3126 ntAPPRIS P2 BASIC7.53□□□□□ -1.2
DEPDC4Q8N2C3 AC107021.2-201ENST00000567714 2095 ntBASIC7.53□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms