Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC5.54□□□□□ -1.52
C9orf40Q8IXQ3 AC002069.1-201ENST00000429649 1159 ntBASIC5.54□□□□□ -1.52
C9orf40Q8IXQ3 BMS1P10-201ENST00000443754 1120 ntBASIC5.54□□□□□ -1.52
C9orf40Q8IXQ3 REG1CP-206ENST00000447469 496 ntBASIC5.54□□□□□ -1.52
C9orf40Q8IXQ3 HLA-DPA3-207ENST00000454398 229 ntBASIC5.54□□□□□ -1.52
C9orf40Q8IXQ3 NDUFA5P5-201ENST00000468361 342 ntBASIC5.54□□□□□ -1.52
C9orf40Q8IXQ3 AC117394.1-201ENST00000477323 567 ntBASIC5.54□□□□□ -1.52
C9orf40Q8IXQ3 AC008629.2-201ENST00000503783 483 ntBASIC5.54□□□□□ -1.52
C9orf40Q8IXQ3 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC5.54□□□□□ -1.52
C9orf40Q8IXQ3 RNA5SP438-201ENST00000516561 112 ntBASIC5.54□□□□□ -1.52
C9orf40Q8IXQ3 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC5.54□□□□□ -1.52
C9orf40Q8IXQ3 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC5.54□□□□□ -1.52
C9orf40Q8IXQ3 AC068305.2-201ENST00000550567 1205 ntBASIC5.54□□□□□ -1.52
C9orf40Q8IXQ3 HNRNPCP1-201ENST00000556181 766 ntBASIC5.54□□□□□ -1.52
C9orf40Q8IXQ3 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
C9orf40Q8IXQ3 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC5.54□□□□□ -1.52
C9orf40Q8IXQ3 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC5.54□□□□□ -1.52
C9orf40Q8IXQ3 AC108865.2-201ENST00000606881 432 ntBASIC5.54□□□□□ -1.52
C9orf40Q8IXQ3 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC5.54□□□□□ -1.52
C9orf40Q8IXQ3 MIR6793-201ENST00000612376 63 ntBASIC5.54□□□□□ -1.52
C9orf40Q8IXQ3 FO681491.1-202ENST00000623392 737 ntBASIC5.54□□□□□ -1.52
C9orf40Q8IXQ3 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC5.54□□□□□ -1.52
C9orf40Q8IXQ3 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
C9orf40Q8IXQ3 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC5.54□□□□□ -1.52
C9orf40Q8IXQ3 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
C9orf40Q8IXQ3 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
C9orf40Q8IXQ3 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC5.54□□□□□ -1.52
C9orf40Q8IXQ3 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC5.54□□□□□ -1.52
C9orf40Q8IXQ3 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
C9orf40Q8IXQ3 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC5.53□□□□□ -1.52
C9orf40Q8IXQ3 RRN3-202ENST00000327307 2039 ntTSL 2 BASIC5.53□□□□□ -1.52
C9orf40Q8IXQ3 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
C9orf40Q8IXQ3 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
C9orf40Q8IXQ3 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
C9orf40Q8IXQ3 AL592429.1-201ENST00000403909 1473 ntBASIC5.53□□□□□ -1.52
C9orf40Q8IXQ3 ZCCHC6-204ENST00000375957 2262 ntTSL 2 BASIC5.53□□□□□ -1.52
C9orf40Q8IXQ3 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
C9orf40Q8IXQ3 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC5.53□□□□□ -1.52
C9orf40Q8IXQ3 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
C9orf40Q8IXQ3 TMSB4XP2-201ENST00000335179 210 ntBASIC5.53□□□□□ -1.52
C9orf40Q8IXQ3 RNA5SP211-201ENST00000365516 117 ntBASIC5.53□□□□□ -1.52
C9orf40Q8IXQ3 HSD17B7P1-201ENST00000412419 1017 ntBASIC5.53□□□□□ -1.52
C9orf40Q8IXQ3 MYL6P5-201ENST00000412707 459 ntBASIC5.53□□□□□ -1.52
C9orf40Q8IXQ3 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC5.53□□□□□ -1.52
C9orf40Q8IXQ3 BX284632.2-201ENST00000421091 399 ntBASIC5.53□□□□□ -1.52
C9orf40Q8IXQ3 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC5.53□□□□□ -1.52
C9orf40Q8IXQ3 FTO-202ENST00000431610 707 ntTSL 3 BASIC5.53□□□□□ -1.52
C9orf40Q8IXQ3 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
C9orf40Q8IXQ3 AL445928.1-201ENST00000435545 222 ntBASIC5.53□□□□□ -1.52
C9orf40Q8IXQ3 AL512605.1-202ENST00000441919 381 ntBASIC5.53□□□□□ -1.52
C9orf40Q8IXQ3 AL359955.2-201ENST00000445380 353 ntBASIC5.53□□□□□ -1.52
C9orf40Q8IXQ3 ACA64.4-201ENST00000459070 127 ntBASIC5.53□□□□□ -1.52
C9orf40Q8IXQ3 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC5.53□□□□□ -1.52
C9orf40Q8IXQ3 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC5.53□□□□□ -1.52
C9orf40Q8IXQ3 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC5.53□□□□□ -1.52
C9orf40Q8IXQ3 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC5.53□□□□□ -1.52
C9orf40Q8IXQ3 SETP21-201ENST00000514799 892 ntBASIC5.53□□□□□ -1.52
C9orf40Q8IXQ3 AC060775.1-201ENST00000518241 520 ntBASIC5.53□□□□□ -1.52
C9orf40Q8IXQ3 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC5.53□□□□□ -1.52
C9orf40Q8IXQ3 AC008429.4-201ENST00000521201 182 ntBASIC5.53□□□□□ -1.52
C9orf40Q8IXQ3 OR7E158P-201ENST00000524483 910 ntBASIC5.53□□□□□ -1.52
C9orf40Q8IXQ3 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC5.53□□□□□ -1.52
C9orf40Q8IXQ3 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC5.53□□□□□ -1.52
C9orf40Q8IXQ3 MIR4776-2-201ENST00000580204 80 ntBASIC5.53□□□□□ -1.52
C9orf40Q8IXQ3 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC5.53□□□□□ -1.52
C9orf40Q8IXQ3 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC5.53□□□□□ -1.52
C9orf40Q8IXQ3 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC5.53□□□□□ -1.52
C9orf40Q8IXQ3 AL136131.3-201ENST00000607600 188 ntBASIC5.53□□□□□ -1.52
C9orf40Q8IXQ3 Metazoa_SRP.207-201ENST00000612254 285 ntBASIC5.53□□□□□ -1.52
C9orf40Q8IXQ3 AC129778.1-202ENST00000623812 261 ntBASIC5.53□□□□□ -1.52
C9orf40Q8IXQ3 AL591379.1-207ENST00000635982 261 ntBASIC5.53□□□□□ -1.52
C9orf40Q8IXQ3 AMYH02020865.1-205ENST00000636189 261 ntBASIC5.53□□□□□ -1.52
C9orf40Q8IXQ3 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
C9orf40Q8IXQ3 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC5.53□□□□□ -1.52
C9orf40Q8IXQ3 AP000432.2-201ENST00000624164 2048 ntBASIC5.53□□□□□ -1.52
C9orf40Q8IXQ3 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
C9orf40Q8IXQ3 AC005725.1-201ENST00000577346 2607 ntBASIC5.53□□□□□ -1.52
C9orf40Q8IXQ3 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
C9orf40Q8IXQ3 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
C9orf40Q8IXQ3 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC5.52□□□□□ -1.53
C9orf40Q8IXQ3 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
C9orf40Q8IXQ3 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
C9orf40Q8IXQ3 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
C9orf40Q8IXQ3 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
C9orf40Q8IXQ3 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
C9orf40Q8IXQ3 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
C9orf40Q8IXQ3 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
C9orf40Q8IXQ3 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC5.52□□□□□ -1.53
C9orf40Q8IXQ3 KCTD4-201ENST00000379108 1865 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
C9orf40Q8IXQ3 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
C9orf40Q8IXQ3 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
C9orf40Q8IXQ3 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
C9orf40Q8IXQ3 MIR1282-201ENST00000408865 101 ntBASIC5.52□□□□□ -1.53
C9orf40Q8IXQ3 PMCHL1-203ENST00000423301 697 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
C9orf40Q8IXQ3 AC099677.3-201ENST00000427081 395 ntBASIC5.52□□□□□ -1.53
C9orf40Q8IXQ3 KCTD9P1-201ENST00000430462 1167 ntBASIC5.52□□□□□ -1.53
C9orf40Q8IXQ3 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
C9orf40Q8IXQ3 NDUFS5P5-201ENST00000437256 321 ntBASIC5.52□□□□□ -1.53
C9orf40Q8IXQ3 VN1R110P-201ENST00000438988 971 ntBASIC5.52□□□□□ -1.53
C9orf40Q8IXQ3 EIF5AP4-201ENST00000441206 465 ntBASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms