Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC5.56□□□□□ -1.52
LINC00346Q8IVM7 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
LINC00346Q8IVM7 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC5.56□□□□□ -1.52
LINC00346Q8IVM7 SAMMSON-210ENST00000641260 1308 ntBASIC5.56□□□□□ -1.52
LINC00346Q8IVM7 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
LINC00346Q8IVM7 AL034546.1-201ENST00000623740 3693 ntBASIC5.56□□□□□ -1.52
LINC00346Q8IVM7 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC5.56□□□□□ -1.52
LINC00346Q8IVM7 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
LINC00346Q8IVM7 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
LINC00346Q8IVM7 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
LINC00346Q8IVM7 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
LINC00346Q8IVM7 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
LINC00346Q8IVM7 RNA5SP514-201ENST00000363717 111 ntBASIC5.56□□□□□ -1.52
LINC00346Q8IVM7 UBTFL2-201ENST00000411859 1191 ntBASIC5.56□□□□□ -1.52
LINC00346Q8IVM7 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC5.56□□□□□ -1.52
LINC00346Q8IVM7 RPS26P13-201ENST00000419030 330 ntBASIC5.56□□□□□ -1.52
LINC00346Q8IVM7 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC5.56□□□□□ -1.52
LINC00346Q8IVM7 FAR1P1-201ENST00000427163 934 ntBASIC5.56□□□□□ -1.52
LINC00346Q8IVM7 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC5.56□□□□□ -1.52
LINC00346Q8IVM7 AL645939.3-201ENST00000435408 225 ntBASIC5.56□□□□□ -1.52
LINC00346Q8IVM7 AC147651.1-201ENST00000453149 572 ntTSL 2 BASIC5.56□□□□□ -1.52
LINC00346Q8IVM7 AC069277.2-201ENST00000454211 432 ntBASIC5.56□□□□□ -1.52
LINC00346Q8IVM7 AL022319.1-201ENST00000458183 1167 ntBASIC5.56□□□□□ -1.52
LINC00346Q8IVM7 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC5.56□□□□□ -1.52
LINC00346Q8IVM7 MARK2P8-201ENST00000476069 952 ntBASIC5.56□□□□□ -1.52
LINC00346Q8IVM7 AC015524.1-201ENST00000491585 472 ntBASIC5.56□□□□□ -1.52
LINC00346Q8IVM7 ADAM3A-209ENST00000497806 1245 ntTSL 5 BASIC5.56□□□□□ -1.52
LINC00346Q8IVM7 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC5.56□□□□□ -1.52
LINC00346Q8IVM7 HAUS1P1-201ENST00000505275 832 ntBASIC5.56□□□□□ -1.52
LINC00346Q8IVM7 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC5.56□□□□□ -1.52
LINC00346Q8IVM7 AC034244.2-201ENST00000514668 858 ntBASIC5.56□□□□□ -1.52
LINC00346Q8IVM7 AC011396.2-201ENST00000515598 582 ntTSL 3 BASIC5.56□□□□□ -1.52
LINC00346Q8IVM7 RNA5SP418-201ENST00000515951 117 ntBASIC5.56□□□□□ -1.52
LINC00346Q8IVM7 RNA5SP400-201ENST00000517155 111 ntBASIC5.56□□□□□ -1.52
LINC00346Q8IVM7 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC5.56□□□□□ -1.52
LINC00346Q8IVM7 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC5.56□□□□□ -1.52
LINC00346Q8IVM7 AC022509.1-202ENST00000537525 494 ntTSL 4 BASIC5.56□□□□□ -1.52
LINC00346Q8IVM7 MYL2-203ENST00000548438 664 ntTSL 3 BASIC5.56□□□□□ -1.52
LINC00346Q8IVM7 AL162511.1-201ENST00000556542 879 ntTSL 4 BASIC5.56□□□□□ -1.52
LINC00346Q8IVM7 AP3S2-214ENST00000560940 519 ntTSL 5 BASIC5.56□□□□□ -1.52
LINC00346Q8IVM7 AC018845.1-201ENST00000564193 744 ntTSL 2 BASIC5.56□□□□□ -1.52
LINC00346Q8IVM7 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC5.56□□□□□ -1.52
LINC00346Q8IVM7 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC5.56□□□□□ -1.52
LINC00346Q8IVM7 AC016839.1-201ENST00000578162 867 ntBASIC5.56□□□□□ -1.52
LINC00346Q8IVM7 MIR3189-201ENST00000578735 73 ntBASIC5.56□□□□□ -1.52
LINC00346Q8IVM7 MIR4732-201ENST00000581873 76 ntBASIC5.56□□□□□ -1.52
LINC00346Q8IVM7 LINC01855-201ENST00000585520 396 ntTSL 3 BASIC5.56□□□□□ -1.52
LINC00346Q8IVM7 AL021368.3-201ENST00000607119 578 ntBASIC5.56□□□□□ -1.52
LINC00346Q8IVM7 AL135786.2-201ENST00000608422 615 ntBASIC5.56□□□□□ -1.52
LINC00346Q8IVM7 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC5.56□□□□□ -1.52
LINC00346Q8IVM7 AL589743.6-201ENST00000611025 117 ntBASIC5.56□□□□□ -1.52
LINC00346Q8IVM7 AC068213.1-201ENST00000625124 226 ntBASIC5.56□□□□□ -1.52
LINC00346Q8IVM7 VIPR1-AS1-221ENST00000626992 602 ntTSL 5 BASIC5.56□□□□□ -1.52
LINC00346Q8IVM7 AL355860.1-201ENST00000636087 1229 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
LINC00346Q8IVM7 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
LINC00346Q8IVM7 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
LINC00346Q8IVM7 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC5.56□□□□□ -1.52
LINC00346Q8IVM7 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
LINC00346Q8IVM7 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
LINC00346Q8IVM7 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC5.56□□□□□ -1.52
LINC00346Q8IVM7 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
LINC00346Q8IVM7 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC5.56□□□□□ -1.52
LINC00346Q8IVM7 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
LINC00346Q8IVM7 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
LINC00346Q8IVM7 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
LINC00346Q8IVM7 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC5.56□□□□□ -1.52
LINC00346Q8IVM7 DDX47-201ENST00000352940 1698 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
LINC00346Q8IVM7 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
LINC00346Q8IVM7 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC5.56□□□□□ -1.52
LINC00346Q8IVM7 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
LINC00346Q8IVM7 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
LINC00346Q8IVM7 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
LINC00346Q8IVM7 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC5.55□□□□□ -1.52
LINC00346Q8IVM7 MT-RNR2-201ENST00000387347 1559 ntBASIC5.55□□□□□ -1.52
LINC00346Q8IVM7 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
LINC00346Q8IVM7 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
LINC00346Q8IVM7 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
LINC00346Q8IVM7 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC5.55□□□□□ -1.52
LINC00346Q8IVM7 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC5.55□□□□□ -1.52
LINC00346Q8IVM7 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
LINC00346Q8IVM7 AL442071.1-201ENST00000289890 558 ntTSL 3 BASIC5.55□□□□□ -1.52
LINC00346Q8IVM7 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
LINC00346Q8IVM7 ECHDC1-202ENST00000368289 909 ntTSL 5 BASIC5.55□□□□□ -1.52
LINC00346Q8IVM7 ARSFP1-201ENST00000398758 477 ntBASIC5.55□□□□□ -1.52
LINC00346Q8IVM7 AL445238.1-204ENST00000400311 463 ntBASIC5.55□□□□□ -1.52
LINC00346Q8IVM7 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC5.55□□□□□ -1.52
LINC00346Q8IVM7 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC5.55□□□□□ -1.52
LINC00346Q8IVM7 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC5.55□□□□□ -1.52
LINC00346Q8IVM7 RNASE9-203ENST00000429244 1084 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
LINC00346Q8IVM7 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC5.55□□□□□ -1.52
LINC00346Q8IVM7 AKR1D1-203ENST00000432161 1236 ntTSL 2 BASIC5.55□□□□□ -1.52
LINC00346Q8IVM7 GTF3AP6-201ENST00000432585 986 ntBASIC5.55□□□□□ -1.52
LINC00346Q8IVM7 FTLP19-201ENST00000433300 394 ntBASIC5.55□□□□□ -1.52
LINC00346Q8IVM7 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC5.55□□□□□ -1.52
LINC00346Q8IVM7 AC100823.1-201ENST00000442274 480 ntTSL 3 BASIC5.55□□□□□ -1.52
LINC00346Q8IVM7 COX4I1P2-201ENST00000447446 547 ntBASIC5.55□□□□□ -1.52
LINC00346Q8IVM7 RPS27AP3-201ENST00000453803 454 ntBASIC5.55□□□□□ -1.52
LINC00346Q8IVM7 AL034369.1-201ENST00000453808 477 ntBASIC5.55□□□□□ -1.52
LINC00346Q8IVM7 UCK2-205ENST00000469256 753 ntTSL 3 BASIC5.55□□□□□ -1.52
LINC00346Q8IVM7 AC128716.1-201ENST00000475129 166 ntBASIC5.55□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 92.2 ms