Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 AC011374.1-201ENST00000564471 1567 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
FOXR1Q6PIV2 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
FOXR1Q6PIV2 PARP2-201ENST00000250416 1886 ntAPPRIS P3 TSL 1 (best) BASIC7.87□□□□□ -1.15
FOXR1Q6PIV2 ATP2B4-204ENST00000367218 8918 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
FOXR1Q6PIV2 LNX1-202ENST00000306888 3757 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
FOXR1Q6PIV2 Z93929.1-201ENST00000418200 1475 ntBASIC7.87□□□□□ -1.15
FOXR1Q6PIV2 HSD11B1-202ENST00000367027 1405 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
FOXR1Q6PIV2 MGAM-209ENST00000620571 6483 ntTSL 5 BASIC7.86□□□□□ -1.15
FOXR1Q6PIV2 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC7.86□□□□□ -1.15
FOXR1Q6PIV2 C4orf26-205ENST00000616557 1725 ntTSL 3 BASIC7.86□□□□□ -1.15
FOXR1Q6PIV2 OR52K3P-202ENST00000641797 1729 ntBASIC7.86□□□□□ -1.15
FOXR1Q6PIV2 BTBD7-208ENST00000555525 2328 ntTSL 5 BASIC7.86□□□□□ -1.15
FOXR1Q6PIV2 SCAMP1-206ENST00000618166 1358 ntTSL 2 BASIC7.86□□□□□ -1.15
FOXR1Q6PIV2 MFSD6-201ENST00000281416 4608 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
FOXR1Q6PIV2 ZG16-201ENST00000400752 3132 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
FOXR1Q6PIV2 ADA2-203ENST00000399837 4505 ntAPPRIS P3 TSL 1 (best) BASIC7.86□□□□□ -1.15
FOXR1Q6PIV2 WFDC8-201ENST00000289953 1069 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
FOXR1Q6PIV2 OR4A16-201ENST00000314721 1081 ntAPPRIS P1 BASIC7.86□□□□□ -1.15
FOXR1Q6PIV2 CLEC1B-202ENST00000348658 869 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
FOXR1Q6PIV2 DEFB132-201ENST00000382376 2121 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
FOXR1Q6PIV2 MIR595-201ENST00000384905 96 ntBASIC7.86□□□□□ -1.15
FOXR1Q6PIV2 SNORA40.2-201ENST00000390847 128 ntBASIC7.86□□□□□ -1.15
FOXR1Q6PIV2 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC7.86□□□□□ -1.15
FOXR1Q6PIV2 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC7.86□□□□□ -1.15
FOXR1Q6PIV2 AL050320.1-201ENST00000420044 446 ntTSL 2 BASIC7.86□□□□□ -1.15
FOXR1Q6PIV2 KRTAP3-4P-201ENST00000430780 280 ntBASIC7.86□□□□□ -1.15
FOXR1Q6PIV2 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC7.86□□□□□ -1.15
FOXR1Q6PIV2 AL954705.1-201ENST00000435277 559 ntBASIC7.86□□□□□ -1.15
FOXR1Q6PIV2 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC7.86□□□□□ -1.15
FOXR1Q6PIV2 LINC01747-201ENST00000437696 1067 ntTSL 2 BASIC7.86□□□□□ -1.15
FOXR1Q6PIV2 LINC01185-201ENST00000439412 554 ntTSL 4 BASIC7.86□□□□□ -1.15
FOXR1Q6PIV2 AC016396.1-201ENST00000440189 328 ntTSL 3 BASIC7.86□□□□□ -1.15
FOXR1Q6PIV2 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC7.86□□□□□ -1.15
FOXR1Q6PIV2 MTND3P1-201ENST00000441336 220 ntBASIC7.86□□□□□ -1.15
FOXR1Q6PIV2 AL358074.1-201ENST00000444800 509 ntTSL 2 BASIC7.86□□□□□ -1.15
FOXR1Q6PIV2 NUTF2P4-201ENST00000458353 381 ntBASIC7.86□□□□□ -1.15
FOXR1Q6PIV2 AHI1-208ENST00000488690 712 ntTSL 5 BASIC7.86□□□□□ -1.15
FOXR1Q6PIV2 AC006387.1-203ENST00000494849 342 ntTSL 3 BASIC7.86□□□□□ -1.15
FOXR1Q6PIV2 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
FOXR1Q6PIV2 AC122710.2-201ENST00000506093 596 ntTSL 4 BASIC7.86□□□□□ -1.15
FOXR1Q6PIV2 TAS2R50-201ENST00000506868 1000 ntAPPRIS P1 BASIC7.86□□□□□ -1.15
FOXR1Q6PIV2 STMN1P2-201ENST00000508435 439 ntBASIC7.86□□□□□ -1.15
FOXR1Q6PIV2 AC114801.1-201ENST00000512633 297 ntBASIC7.86□□□□□ -1.15
FOXR1Q6PIV2 AC097494.1-201ENST00000512898 732 ntTSL 3 BASIC7.86□□□□□ -1.15
FOXR1Q6PIV2 SMIM20-202ENST00000514384 774 ntTSL 5 BASIC7.86□□□□□ -1.15
FOXR1Q6PIV2 AC083843.1-201ENST00000521444 849 ntTSL 4 BASIC7.86□□□□□ -1.15
FOXR1Q6PIV2 AC092818.1-201ENST00000523411 639 ntTSL 3 BASIC7.86□□□□□ -1.15
FOXR1Q6PIV2 SLN-202ENST00000525934 436 ntAPPRIS P1 TSL 3 BASIC7.86□□□□□ -1.15
FOXR1Q6PIV2 LINC00958-202ENST00000526388 607 ntTSL 2 BASIC7.86□□□□□ -1.15
FOXR1Q6PIV2 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC7.86□□□□□ -1.15
FOXR1Q6PIV2 AP003119.2-201ENST00000528075 336 ntTSL 3 BASIC7.86□□□□□ -1.15
FOXR1Q6PIV2 KCTD21-AS1-204ENST00000528468 554 ntTSL 4 BASIC7.86□□□□□ -1.15
FOXR1Q6PIV2 DEFB108A-201ENST00000530110 222 ntBASIC7.86□□□□□ -1.15
FOXR1Q6PIV2 OR4C9P-201ENST00000532368 925 ntBASIC7.86□□□□□ -1.15
FOXR1Q6PIV2 MELK-208ENST00000536987 2125 ntTSL 2 BASIC7.86□□□□□ -1.15
FOXR1Q6PIV2 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC7.86□□□□□ -1.15
FOXR1Q6PIV2 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC7.86□□□□□ -1.15
FOXR1Q6PIV2 AL355076.3-201ENST00000555838 587 ntBASIC7.86□□□□□ -1.15
FOXR1Q6PIV2 AC133485.3-201ENST00000562604 262 ntTSL 5 BASIC7.86□□□□□ -1.15
FOXR1Q6PIV2 AC138907.3-201ENST00000563937 262 ntTSL 3 BASIC7.86□□□□□ -1.15
FOXR1Q6PIV2 AC022165.1-201ENST00000568771 596 ntTSL 5 BASIC7.86□□□□□ -1.15
FOXR1Q6PIV2 AC138869.2-201ENST00000569850 262 ntTSL 3 BASIC7.86□□□□□ -1.15
FOXR1Q6PIV2 MED31-202ENST00000574128 619 ntTSL 3 BASIC7.86□□□□□ -1.15
FOXR1Q6PIV2 MIR4685-201ENST00000578185 69 ntBASIC7.86□□□□□ -1.15
FOXR1Q6PIV2 MIR744-201ENST00000578242 98 ntBASIC7.86□□□□□ -1.15
FOXR1Q6PIV2 AC090774.2-201ENST00000584708 322 ntBASIC7.86□□□□□ -1.15
FOXR1Q6PIV2 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
FOXR1Q6PIV2 AC005884.2-201ENST00000593107 247 ntTSL 5 BASIC7.86□□□□□ -1.15
FOXR1Q6PIV2 CR382285.1-202ENST00000604687 547 ntBASIC7.86□□□□□ -1.15
FOXR1Q6PIV2 AC106782.6-201ENST00000611264 512 ntBASIC7.86□□□□□ -1.15
FOXR1Q6PIV2 AL589743.7-201ENST00000612637 233 ntBASIC7.86□□□□□ -1.15
FOXR1Q6PIV2 AC245028.3-201ENST00000618197 285 ntBASIC7.86□□□□□ -1.15
FOXR1Q6PIV2 OR1S1-201ENST00000624470 978 ntBASIC7.86□□□□□ -1.15
FOXR1Q6PIV2 VIPR1-AS1-221ENST00000626992 602 ntTSL 5 BASIC7.86□□□□□ -1.15
FOXR1Q6PIV2 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC7.86□□□□□ -1.15
FOXR1Q6PIV2 CLCN3-202ENST00000360642 3208 ntTSL 2 BASIC7.86□□□□□ -1.15
FOXR1Q6PIV2 AC008560.1-201ENST00000510585 1766 ntAPPRIS P5 TSL 2 BASIC7.86□□□□□ -1.15
FOXR1Q6PIV2 AC131971.1-201ENST00000332881 1482 ntBASIC7.86□□□□□ -1.15
FOXR1Q6PIV2 LINC01142-201ENST00000440404 1457 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
FOXR1Q6PIV2 TAOK1-202ENST00000536202 4068 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
FOXR1Q6PIV2 AP3M1-201ENST00000355264 5124 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
FOXR1Q6PIV2 CACNA1D-224ENST00000637424 6856 ntAPPRIS ALT2 TSL 5 BASIC7.86□□□□□ -1.15
FOXR1Q6PIV2 PDE11A-212ENST00000358450 3489 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
FOXR1Q6PIV2 KLHL2-204ENST00000506761 2169 ntTSL 5 BASIC7.86□□□□□ -1.15
FOXR1Q6PIV2 TMEM75-201ENST00000624314 2165 ntBASIC7.86□□□□□ -1.15
FOXR1Q6PIV2 FGG-205ENST00000407946 1636 ntTSL 5 BASIC7.85□□□□□ -1.15
FOXR1Q6PIV2 EEF1A1P11-201ENST00000415278 1389 ntBASIC7.85□□□□□ -1.15
FOXR1Q6PIV2 AC002090.1-201ENST00000625000 2138 ntBASIC7.85□□□□□ -1.15
FOXR1Q6PIV2 AP000866.6-201ENST00000638898 3579 ntBASIC7.85□□□□□ -1.15
FOXR1Q6PIV2 LRRC37B-203ENST00000394713 3025 ntAPPRIS P3 TSL 1 (best) BASIC7.85□□□□□ -1.15
FOXR1Q6PIV2 UIMC1-211ENST00000510698 1334 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
FOXR1Q6PIV2 FHL1-230ENST00000630084 1335 ntTSL 2 BASIC7.85□□□□□ -1.15
FOXR1Q6PIV2 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
FOXR1Q6PIV2 MAP3K19-205ENST00000392917 1765 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
FOXR1Q6PIV2 SLC17A3-203ENST00000361703 1543 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
FOXR1Q6PIV2 TCTN1-201ENST00000377654 1539 ntTSL 5 BASIC7.85□□□□□ -1.15
FOXR1Q6PIV2 KCNA2-214ENST00000640774 6673 ntTSL 5 BASIC7.85□□□□□ -1.15
FOXR1Q6PIV2 ZNF345-202ENST00000420450 1971 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
FOXR1Q6PIV2 GZMA-201ENST00000274306 894 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
FOXR1Q6PIV2 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms