Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC5.98□□□□□ -1.45
CDK3Q00526 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC5.98□□□□□ -1.45
CDK3Q00526 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC5.98□□□□□ -1.45
CDK3Q00526 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC5.98□□□□□ -1.45
CDK3Q00526 AC092944.2-201ENST00000605443 889 ntBASIC5.98□□□□□ -1.45
CDK3Q00526 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC5.98□□□□□ -1.45
CDK3Q00526 MIR6809-201ENST00000612189 116 ntBASIC5.98□□□□□ -1.45
CDK3Q00526 MIR6793-201ENST00000612376 63 ntBASIC5.98□□□□□ -1.45
CDK3Q00526 AP001962.1-201ENST00000624114 559 ntBASIC5.98□□□□□ -1.45
CDK3Q00526 MTCO1P1-201ENST00000624263 1081 ntBASIC5.98□□□□□ -1.45
CDK3Q00526 OLMALINC-203ENST00000641087 3779 ntBASIC5.98□□□□□ -1.45
CDK3Q00526 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
CDK3Q00526 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
CDK3Q00526 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC5.98□□□□□ -1.45
CDK3Q00526 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
CDK3Q00526 RBPJP7-201ENST00000442803 1447 ntBASIC5.98□□□□□ -1.45
CDK3Q00526 RBPJP5-201ENST00000449433 1447 ntBASIC5.98□□□□□ -1.45
CDK3Q00526 AC006511.3-201ENST00000624929 1783 ntBASIC5.98□□□□□ -1.45
CDK3Q00526 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
CDK3Q00526 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
CDK3Q00526 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
CDK3Q00526 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
CDK3Q00526 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC5.97□□□□□ -1.45
CDK3Q00526 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC5.97□□□□□ -1.45
CDK3Q00526 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
CDK3Q00526 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.97□□□□□ -1.45
CDK3Q00526 AL049634.1-201ENST00000453770 1720 ntBASIC5.97□□□□□ -1.45
CDK3Q00526 AC008957.3-201ENST00000624112 2242 ntBASIC5.97□□□□□ -1.45
CDK3Q00526 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
CDK3Q00526 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC5.97□□□□□ -1.45
CDK3Q00526 RERGL-201ENST00000229002 1147 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
CDK3Q00526 OR10R3P-201ENST00000361688 942 ntBASIC5.97□□□□□ -1.45
CDK3Q00526 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
CDK3Q00526 AP003170.5-201ENST00000397185 335 ntBASIC5.97□□□□□ -1.45
CDK3Q00526 HMGN1P20-201ENST00000411849 300 ntBASIC5.97□□□□□ -1.45
CDK3Q00526 RPS21P8-201ENST00000413365 247 ntBASIC5.97□□□□□ -1.45
CDK3Q00526 GSTM2-205ENST00000414179 982 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
CDK3Q00526 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC5.97□□□□□ -1.45
CDK3Q00526 AC007562.1-201ENST00000421819 517 ntBASIC5.97□□□□□ -1.45
CDK3Q00526 AC245884.2-201ENST00000426257 404 ntBASIC5.97□□□□□ -1.45
CDK3Q00526 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC5.97□□□□□ -1.45
CDK3Q00526 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC5.97□□□□□ -1.45
CDK3Q00526 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC5.97□□□□□ -1.45
CDK3Q00526 AC023274.2-201ENST00000445264 521 ntBASIC5.97□□□□□ -1.45
CDK3Q00526 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC5.97□□□□□ -1.45
CDK3Q00526 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC5.97□□□□□ -1.45
CDK3Q00526 MTCYBP14-201ENST00000457471 715 ntBASIC5.97□□□□□ -1.45
CDK3Q00526 RN7SL352P-201ENST00000466002 277 ntBASIC5.97□□□□□ -1.45
CDK3Q00526 RN7SL193P-201ENST00000491708 276 ntBASIC5.97□□□□□ -1.45
CDK3Q00526 AC083795.1-201ENST00000491760 320 ntBASIC5.97□□□□□ -1.45
CDK3Q00526 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC5.97□□□□□ -1.45
CDK3Q00526 AC090568.1-201ENST00000509499 856 ntBASIC5.97□□□□□ -1.45
CDK3Q00526 AC006499.4-201ENST00000510947 694 ntBASIC5.97□□□□□ -1.45
CDK3Q00526 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC5.97□□□□□ -1.45
CDK3Q00526 TRIM51DP-201ENST00000529746 596 ntBASIC5.97□□□□□ -1.45
CDK3Q00526 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
CDK3Q00526 AC018558.5-201ENST00000565840 952 ntBASIC5.97□□□□□ -1.45
CDK3Q00526 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC5.97□□□□□ -1.45
CDK3Q00526 AF117829.2-201ENST00000619538 361 ntBASIC5.97□□□□□ -1.45
CDK3Q00526 AC129915.3-201ENST00000634128 948 ntBASIC5.97□□□□□ -1.45
CDK3Q00526 LINC01138-208ENST00000639159 1521 ntTSL 5 BASIC5.97□□□□□ -1.45
CDK3Q00526 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC5.97□□□□□ -1.45
CDK3Q00526 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC5.97□□□□□ -1.45
CDK3Q00526 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC5.97□□□□□ -1.45
CDK3Q00526 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC5.97□□□□□ -1.45
CDK3Q00526 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC5.97□□□□□ -1.45
CDK3Q00526 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC5.97□□□□□ -1.45
CDK3Q00526 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC5.97□□□□□ -1.45
CDK3Q00526 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
CDK3Q00526 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC5.97□□□□□ -1.45
CDK3Q00526 BPIFC-204ENST00000534972 1809 ntTSL 5 BASIC5.97□□□□□ -1.45
CDK3Q00526 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
CDK3Q00526 AF287957.1-201ENST00000607368 1595 ntBASIC5.97□□□□□ -1.45
CDK3Q00526 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC5.97□□□□□ -1.45
CDK3Q00526 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
CDK3Q00526 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.45
CDK3Q00526 AC012254.3-201ENST00000591183 2117 ntBASIC5.96□□□□□ -1.45
CDK3Q00526 AL669831.5-218ENST00000591702 1873 ntBASIC5.96□□□□□ -1.45
CDK3Q00526 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC5.96□□□□□ -1.45
CDK3Q00526 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC5.96□□□□□ -1.45
CDK3Q00526 AL353763.1-201ENST00000624467 1628 ntBASIC5.96□□□□□ -1.45
CDK3Q00526 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
CDK3Q00526 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
CDK3Q00526 LRRFIP2-201ENST00000336686 3208 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
CDK3Q00526 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC5.96□□□□□ -1.46
CDK3Q00526 STT3A-214ENST00000531491 2160 ntTSL 2 BASIC5.96□□□□□ -1.46
CDK3Q00526 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
CDK3Q00526 OR5AQ1P-203ENST00000641818 1529 ntBASIC5.96□□□□□ -1.46
CDK3Q00526 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC5.96□□□□□ -1.46
CDK3Q00526 ZNF19-206ENST00000565100 2087 ntTSL 5 BASIC5.96□□□□□ -1.46
CDK3Q00526 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
CDK3Q00526 TPT1-204ENST00000379060 764 ntTSL 5 BASIC5.96□□□□□ -1.46
CDK3Q00526 SNRPEP6-201ENST00000407465 277 ntBASIC5.96□□□□□ -1.46
CDK3Q00526 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC5.96□□□□□ -1.46
CDK3Q00526 AC116036.1-201ENST00000412199 367 ntBASIC5.96□□□□□ -1.46
CDK3Q00526 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC5.96□□□□□ -1.46
CDK3Q00526 TMA16P2-201ENST00000413187 601 ntBASIC5.96□□□□□ -1.46
CDK3Q00526 RPL35AP3-201ENST00000414680 288 ntBASIC5.96□□□□□ -1.46
CDK3Q00526 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC5.96□□□□□ -1.46
CDK3Q00526 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC5.96□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 67.8 ms